| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is lacG [H]
Identifier: 238923762
GI number: 238923762
Start: 1258787
End: 1259617
Strand: Direct
Name: lacG [H]
Synonym: EUBREC_1384
Alternate gene names: 238923762
Gene position: 1258787-1259617 (Clockwise)
Preceding gene: 238923761
Following gene: 238923763
Centisome position: 36.49
GC content: 41.52
Gene sequence:
>831_bases GTGACTAAGAAAAAACATGGATCATCAATACAAAAAAGGCTTATACCTTCATACATTTTTCTTGTAATAGTTTCGTTCAT CTCAGTATTTCCGTTTTTCTGGATGATATCGGCAGCGACCAACAAGTCTATTGACATTGCAAGAGGTAGAATTGCATTTG GTGGCTATGCCCTTGAGAACTTAAAGAAACTGTTTGCATCACAGAACGTTGCACTTGGAATGAAAAACTCACTTATCAAT GCAACAGTTCAGACAATTATAGCACTGCTTGTCTGCTCACTTGCCGGTTACGGCTTTGAGCTCTATCATGACAAGGCAAA GGATAAGCTGTTCTCAGTTTTACTTCTTGCCATGATGATTCCGCAGGTAGCTACACTTATTCCTCTGTTCAAGATGATGT CAAAGCTCGGCTTTATAAATACGGTATGGGGCTTCATGCTCCCGGCTATTTCAACGCCGTTCCTCATCATGATGTTCAGA CAGAATTCGAGAAACTTCCCAGTCGATATAATGGAGGCGGCACGAATTGACGGACTCAGTGAGATTGGTATTTTCTTCAA GATGTATATGCCTGTACAGAAATCAACATATGCAGCAGCTGCAGTTATCACATTCATGAATGCATGGAACTCATACCTGT GGCCAAAGGTAATCCTCAATAAGCCTGATGCTATCACAATGCCAATGCTTATTGCAAACCTCGCAGCAGGATATACAGTA GATTACGGTGTACTGATGATGGGCGTTCTTTTCTGCTCCATCCCTACAATGCTCGTATTCTTTGTGCTCCAGAAGCAGTT TGCAGAGGGAATTACAGGATCTGTTAAATAA
Upstream 100 bases:
>100_bases GAAGGCGTTGCAAACTTTGGATATGCATCAGCAATGTCTGTTATCGTATTCATCATGGTTGCTATACTGGCATTTATCAA TCTGAAAGTAGGTGACAAGC
Downstream 100 bases:
>100_bases AAGTAAAATAATATTGTTAAAAATCAAGAAGGCAAATAATATTTATTATTTGCCTTCGTCTTATAAGAGGCTTTGTGTTT AAAACAGACATGTATCAAAT
Product: lactose transport system (permease)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MTKKKHGSSIQKRLIPSYIFLVIVSFISVFPFFWMISAATNKSIDIARGRIAFGGYALENLKKLFASQNVALGMKNSLIN ATVQTIIALLVCSLAGYGFELYHDKAKDKLFSVLLLAMMIPQVATLIPLFKMMSKLGFINTVWGFMLPAISTPFLIMMFR QNSRNFPVDIMEAARIDGLSEIGIFFKMYMPVQKSTYAAAAVITFMNAWNSYLWPKVILNKPDAITMPMLIANLAAGYTV DYGVLMMGVLFCSIPTMLVFFVLQKQFAEGITGSVK
Sequences:
>Translated_276_residues MTKKKHGSSIQKRLIPSYIFLVIVSFISVFPFFWMISAATNKSIDIARGRIAFGGYALENLKKLFASQNVALGMKNSLIN ATVQTIIALLVCSLAGYGFELYHDKAKDKLFSVLLLAMMIPQVATLIPLFKMMSKLGFINTVWGFMLPAISTPFLIMMFR QNSRNFPVDIMEAARIDGLSEIGIFFKMYMPVQKSTYAAAAVITFMNAWNSYLWPKVILNKPDAITMPMLIANLAAGYTV DYGVLMMGVLFCSIPTMLVFFVLQKQFAEGITGSVK >Mature_275_residues TKKKHGSSIQKRLIPSYIFLVIVSFISVFPFFWMISAATNKSIDIARGRIAFGGYALENLKKLFASQNVALGMKNSLINA TVQTIIALLVCSLAGYGFELYHDKAKDKLFSVLLLAMMIPQVATLIPLFKMMSKLGFINTVWGFMLPAISTPFLIMMFRQ NSRNFPVDIMEAARIDGLSEIGIFFKMYMPVQKSTYAAAAVITFMNAWNSYLWPKVILNKPDAITMPMLIANLAAGYTVD YGVLMMGVLFCSIPTMLVFFVLQKQFAEGITGSVK
Specific function: Part of the binding-protein-dependent transport system for lactose. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1789860, Length=270, Percent_Identity=26.2962962962963, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787571, Length=186, Percent_Identity=24.7311827956989, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30777; Mature: 30645
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 6.9 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKKHGSSIQKRLIPSYIFLVIVSFISVFPFFWMISAATNKSIDIARGRIAFGGYALEN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHCCHHHHHH LKKLFASQNVALGMKNSLINATVQTIIALLVCSLAGYGFELYHDKAKDKLFSVLLLAMMI HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH PQVATLIPLFKMMSKLGFINTVWGFMLPAISTPFLIMMFRQNSRNFPVDIMEAARIDGLS HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHCCHH EIGIFFKMYMPVQKSTYAAAAVITFMNAWNSYLWPKVILNKPDAITMPMLIANLAAGYTV HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHCCCCH DYGVLMMGVLFCSIPTMLVFFVLQKQFAEGITGSVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TKKKHGSSIQKRLIPSYIFLVIVSFISVFPFFWMISAATNKSIDIARGRIAFGGYALEN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHCCHHHHHH LKKLFASQNVALGMKNSLINATVQTIIALLVCSLAGYGFELYHDKAKDKLFSVLLLAMMI HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH PQVATLIPLFKMMSKLGFINTVWGFMLPAISTPFLIMMFRQNSRNFPVDIMEAARIDGLS HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHCCHH EIGIFFKMYMPVQKSTYAAAAVITFMNAWNSYLWPKVILNKPDAITMPMLIANLAAGYTV HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHCCCCH DYGVLMMGVLFCSIPTMLVFFVLQKQFAEGITGSVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1630315 [H]