| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is leuA [C]
Identifier: 238923698
GI number: 238923698
Start: 1197304
End: 1198275
Strand: Direct
Name: leuA [C]
Synonym: EUBREC_1320
Alternate gene names: 238923698
Gene position: 1197304-1198275 (Clockwise)
Preceding gene: 238923696
Following gene: 238923699
Centisome position: 34.71
GC content: 45.68
Gene sequence:
>972_bases ATGGCTCAGAAAGGTGATTTAATGACAGCACGCCCTGATATCCGCGTGCTTGACGCTACCATTAGGGATGGAGGACTGGT AAACAACTTTATGTTTACAGATGATTTTATCAATGCTCTTTATCGTGCAAACGTAAAGGCAGGCATCGACTATATGGAGT TTGGTTATAAAGCATCTAAGGAGCTTTTTGATGTAAATAAATTCGGCAAATGGAAGTTCTGTGATGAGGCAGCTATCCGT GAGATAGTCGGAGACAACAACTCTGATATGAAGATTTCTGTCATGGCGGATGTCGGCAGATGTGACTACAAGAAGGATAT TCTCCCTCGCGAGGACAGTGTGATTGACATGGTGCGTGTGGCTACATATGTACATCAGATGCCAGCAGCAATCGAGATGA TTGAGGATGCCAAGTCCAAGGGCTACGAGGTAACCTGCAACATCATGGCCATCTCAAATACACAGGAATCAGACCTTGAT CAGGCACTTGACATGGTTGCCAAGAGCTCTGCAGACGGCATATACATCGTAGACAGCTACGGAGCTCTCTACCCTGAGCA GATTCGCCGCATTGCCGAGAAATACACAGAAATTGCTGAGGCAAACGGAAAGTTCGTAGGAATGCATGCGCACAATAATC AGCAGCTTGCATTTGCAAACACCATAGAGGCAGCAGCCCAGGGAGTCAGCCTGTTGGATGCAACAATGATGGGCATGGGA CGAGGCGCAGGAAACTGTGCGATGGAGCTTTTACTCAGCTTCCTAAAAAATCCAAAATACAATGTATTCCCTGTACTTAA ATTTATTGAAGAGCATATGCTTCCGCTTAAGGAGAGCGGTGCTGTATGGGGCTACGATATTCCATACCTGCTCACAGGAC GCTTAAATCAGCATCCATCAGCAGCCATTGACTACATCAAGTCAGGCGAGACACATTACGCTGATTTCTACACAGATTTG CTTGATAAATAA
Upstream 100 bases:
>100_bases TGCTTTAAAGCGATGAAGCATTAAAACTTTAAATTGTAACATCAAGCTACAGTAATATTTATATTTGTTACAATAATATT TATACTTGGAGGAAACAAAA
Downstream 100 bases:
>100_bases AAATAGATAGATGTATATAAATCAATCCGCTATGCCAGATTTTGGTGTAGCGGATTGTTTTTTATATGTTATAGTAATTT TTTGTTGGTGATAAATCATA
Product: HMGL family protein
Products: NA
Alternate protein names: HOA; 4-hydroxy-2-keto-pentanoic acid aldolase; 4-hydroxy-2-oxopentanoate aldolase [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MAQKGDLMTARPDIRVLDATIRDGGLVNNFMFTDDFINALYRANVKAGIDYMEFGYKASKELFDVNKFGKWKFCDEAAIR EIVGDNNSDMKISVMADVGRCDYKKDILPREDSVIDMVRVATYVHQMPAAIEMIEDAKSKGYEVTCNIMAISNTQESDLD QALDMVAKSSADGIYIVDSYGALYPEQIRRIAEKYTEIAEANGKFVGMHAHNNQQLAFANTIEAAAQGVSLLDATMMGMG RGAGNCAMELLLSFLKNPKYNVFPVLKFIEEHMLPLKESGAVWGYDIPYLLTGRLNQHPSAAIDYIKSGETHYADFYTDL LDK
Sequences:
>Translated_323_residues MAQKGDLMTARPDIRVLDATIRDGGLVNNFMFTDDFINALYRANVKAGIDYMEFGYKASKELFDVNKFGKWKFCDEAAIR EIVGDNNSDMKISVMADVGRCDYKKDILPREDSVIDMVRVATYVHQMPAAIEMIEDAKSKGYEVTCNIMAISNTQESDLD QALDMVAKSSADGIYIVDSYGALYPEQIRRIAEKYTEIAEANGKFVGMHAHNNQQLAFANTIEAAAQGVSLLDATMMGMG RGAGNCAMELLLSFLKNPKYNVFPVLKFIEEHMLPLKESGAVWGYDIPYLLTGRLNQHPSAAIDYIKSGETHYADFYTDL LDK >Mature_322_residues AQKGDLMTARPDIRVLDATIRDGGLVNNFMFTDDFINALYRANVKAGIDYMEFGYKASKELFDVNKFGKWKFCDEAAIRE IVGDNNSDMKISVMADVGRCDYKKDILPREDSVIDMVRVATYVHQMPAAIEMIEDAKSKGYEVTCNIMAISNTQESDLDQ ALDMVAKSSADGIYIVDSYGALYPEQIRRIAEKYTEIAEANGKFVGMHAHNNQQLAFANTIEAAAQGVSLLDATMMGMGR GAGNCAMELLLSFLKNPKYNVFPVLKFIEEHMLPLKESGAVWGYDIPYLLTGRLNQHPSAAIDYIKSGETHYADFYTDLL DK
Specific function: Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta-cleavage pathway for the degradation of aromatic compounds [H]
COG id: COG0119
COG function: function code E; Isopropylmalate/homocitrate/citramalate synthases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4-hydroxy-2-oxovalerate aldolase family [H]
Homologues:
None
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017629 - InterPro: IPR013785 - InterPro: IPR012425 - InterPro: IPR000891 - ProDom: PD005364 [H]
Pfam domain/function: PF07836 DmpG_comm; PF00682 HMGL-like [H]
EC number: =4.1.3.39 [H]
Molecular weight: Translated: 36054; Mature: 35922
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS50991 PYR_CT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQKGDLMTARPDIRVLDATIRDGGLVNNFMFTDDFINALYRANVKAGIDYMEFGYKASK CCCCCCCEECCCCCEEEEEECCCCCCEECCEEHHHHHHHHHHCCHHHCCHHHHHCCHHHH ELFDVNKFGKWKFCDEAAIREIVGDNNSDMKISVMADVGRCDYKKDILPREDSVIDMVRV HHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHCCCCCCCHHHHHHHH ATYVHQMPAAIEMIEDAKSKGYEVTCNIMAISNTQESDLDQALDMVAKSSADGIYIVDSY HHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECC GALYPEQIRRIAEKYTEIAEANGKFVGMHAHNNQQLAFANTIEAAAQGVSLLDATMMGMG CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCC RGAGNCAMELLLSFLKNPKYNVFPVLKFIEEHMLPLKESGAVWGYDIPYLLTGRLNQHPS CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHCCCEECCCCCEEEECCCCCCCH AAIDYIKSGETHYADFYTDLLDK HHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure AQKGDLMTARPDIRVLDATIRDGGLVNNFMFTDDFINALYRANVKAGIDYMEFGYKASK CCCCCCEECCCCCEEEEEECCCCCCEECCEEHHHHHHHHHHCCHHHCCHHHHHCCHHHH ELFDVNKFGKWKFCDEAAIREIVGDNNSDMKISVMADVGRCDYKKDILPREDSVIDMVRV HHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHCCCCCCCHHHHHHHH ATYVHQMPAAIEMIEDAKSKGYEVTCNIMAISNTQESDLDQALDMVAKSSADGIYIVDSY HHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECC GALYPEQIRRIAEKYTEIAEANGKFVGMHAHNNQQLAFANTIEAAAQGVSLLDATMMGMG CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCC RGAGNCAMELLLSFLKNPKYNVFPVLKFIEEHMLPLKESGAVWGYDIPYLLTGRLNQHPS CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHCCCEECCCCCEEEECCCCCCCH AAIDYIKSGETHYADFYTDLLDK HHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA