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The map label for this gene is xtmA [H]

Identifier: 238923661

GI number: 238923661

Start: 1165349

End: 1166200

Strand: Direct

Name: xtmA [H]

Synonym: EUBREC_1283

Alternate gene names: 238923661

Gene position: 1165349-1166200 (Clockwise)

Preceding gene: 238923660

Following gene: 238923662

Centisome position: 33.78

GC content: 42.14

Gene sequence:

>852_bases
GTGGAAAAATATGAGCAGGCAGAGCTGGATTACATAGCCGGAATGAAGTACAAAGAGATAGCGGAAAAGTACGAGACAAG
CGTCAACACCGTGAAAAGCTGGAAGCAGAGATATAACTGGGTAAGAGAAAAGCGCAATAGTAGAGATGCAAAAAAAGAGT
GTGCACACAAAAATAAAAAAGTGTGCATACAAAAAATCAAAGGTGCAGCAGTCTCTGATGAAACAGAAAAAGAACAGGTG
TTCAATGATGCCGAAAATCCGGCATTAGATGAAAGAAAAAAATTATTTTGTCTTTTATACAGCCAGACATTCAATGCCAC
ACAGAGCTATCAGAAGGCATATGGATGTTCCATGAATACAGCAAGAGCACATGGATATGAACTGTTGAAAAATGTGGAGG
TAAAAAGTGAAATAGAGTATCTGACAGAGTTAAAGAGGCAGCAGTTGCTTGCAAAAGAGTCAGATTTTGTGGAGCTGCAG
ATGAGGATAGCGTTCGCGGATGCAGGAGATTATTACGCAATAAAGGGGGATAAAATCGTCTGGAAAGACTCAGATCAGAC
AGATACCCAGCTCGTGAGAGAGGCAAAAACAGTAAAAGGAGATATCAGCCTGAGCCTGTATGATAAGCAGAAAGCAATAG
ACTGGCTGACGAAGTACTTTCTCATGCATCCGGATGATAAATACAAAGCTGAGTTTGACAAGAAGCGGGCAGAGGTAAAG
GATGATTCTGCCGAGCAGATACTGGCCAATATGCAGATAATAACGGATGTATTGAAAAATCCGGTACCAAACAGGAAGAT
AGAGGACTTGGAGGGGGATGAGGAGAGTGAACAGACCGGCACCACTGAGTGA

Upstream 100 bases:

>100_bases
ACAGGTGGTACAAGAAAAATCGTGATAATTTTGCATCATGGTATTTTGGAAGCAGTGGAAAACCAAAGTGATATAGACAT
ACAGAAAGCGAGGTGAAGAC

Downstream 100 bases:

>100_bases
AAGACAATATGAATATATGCAGAGGTGCATAAATAGCTGGTTTAACGTAGCAGAAGGTGGAAAAAGAGGCGGAAAAAACG
TATTACAGACCCTGATATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MEKYEQAELDYIAGMKYKEIAEKYETSVNTVKSWKQRYNWVREKRNSRDAKKECAHKNKKVCIQKIKGAAVSDETEKEQV
FNDAENPALDERKKLFCLLYSQTFNATQSYQKAYGCSMNTARAHGYELLKNVEVKSEIEYLTELKRQQLLAKESDFVELQ
MRIAFADAGDYYAIKGDKIVWKDSDQTDTQLVREAKTVKGDISLSLYDKQKAIDWLTKYFLMHPDDKYKAEFDKKRAEVK
DDSAEQILANMQIITDVLKNPVPNRKIEDLEGDEESEQTGTTE

Sequences:

>Translated_283_residues
MEKYEQAELDYIAGMKYKEIAEKYETSVNTVKSWKQRYNWVREKRNSRDAKKECAHKNKKVCIQKIKGAAVSDETEKEQV
FNDAENPALDERKKLFCLLYSQTFNATQSYQKAYGCSMNTARAHGYELLKNVEVKSEIEYLTELKRQQLLAKESDFVELQ
MRIAFADAGDYYAIKGDKIVWKDSDQTDTQLVREAKTVKGDISLSLYDKQKAIDWLTKYFLMHPDDKYKAEFDKKRAEVK
DDSAEQILANMQIITDVLKNPVPNRKIEDLEGDEESEQTGTTE
>Mature_283_residues
MEKYEQAELDYIAGMKYKEIAEKYETSVNTVKSWKQRYNWVREKRNSRDAKKECAHKNKKVCIQKIKGAAVSDETEKEQV
FNDAENPALDERKKLFCLLYSQTFNATQSYQKAYGCSMNTARAHGYELLKNVEVKSEIEYLTELKRQQLLAKESDFVELQ
MRIAFADAGDYYAIKGDKIVWKDSDQTDTQLVREAKTVKGDISLSLYDKQKAIDWLTKYFLMHPDDKYKAEFDKKRAEVK
DDSAEQILANMQIITDVLKNPVPNRKIEDLEGDEESEQTGTTE

Specific function: Functions as a terminase [H]

COG id: COG3728

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqaS and B.subtilis phage SPP1 terminase small subunit [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018925
- InterPro:   IPR005335 [H]

Pfam domain/function: PF10668 Phage_terminase; PF03592 Terminase_2 [H]

EC number: NA

Molecular weight: Translated: 32930; Mature: 32930

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKYEQAELDYIAGMKYKEIAEKYETSVNTVKSWKQRYNWVREKRNSRDAKKECAHKNKK
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHH
VCIQKIKGAAVSDETEKEQVFNDAENPALDERKKLFCLLYSQTFNATQSYQKAYGCSMNT
HHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHEEHHHHHHHCCHHHHHHHHHCCCCCC
ARAHGYELLKNVEVKSEIEYLTELKRQQLLAKESDFVELQMRIAFADAGDYYAIKGDKIV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEECCEEE
WKDSDQTDTQLVREAKTVKGDISLSLYDKQKAIDWLTKYFLMHPDDKYKAEFDKKRAEVK
ECCCCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
DDSAEQILANMQIITDVLKNPVPNRKIEDLEGDEESEQTGTTE
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEKYEQAELDYIAGMKYKEIAEKYETSVNTVKSWKQRYNWVREKRNSRDAKKECAHKNKK
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHH
VCIQKIKGAAVSDETEKEQVFNDAENPALDERKKLFCLLYSQTFNATQSYQKAYGCSMNT
HHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHEEHHHHHHHCCHHHHHHHHHCCCCCC
ARAHGYELLKNVEVKSEIEYLTELKRQQLLAKESDFVELQMRIAFADAGDYYAIKGDKIV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEECCEEE
WKDSDQTDTQLVREAKTVKGDISLSLYDKQKAIDWLTKYFLMHPDDKYKAEFDKKRAEVK
ECCCCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
DDSAEQILANMQIITDVLKNPVPNRKIEDLEGDEESEQTGTTE
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083174; 9384377 [H]