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The map label for this gene is 238923608

Identifier: 238923608

GI number: 238923608

Start: 1130509

End: 1130919

Strand: Direct

Name: 238923608

Synonym: EUBREC_1230

Alternate gene names: NA

Gene position: 1130509-1130919 (Clockwise)

Preceding gene: 238923607

Following gene: 238923610

Centisome position: 32.77

GC content: 29.93

Gene sequence:

>411_bases
ATGTATGAAATGAAACCAGAATATTATATCGGCATAGATATGATAGACGAAGAGCATAAGCAGTTGTTTAAATATGCAGA
TGATGCATATGAACTGCTTCATGACGAGAATACACCGGATAAATATGATAGAATTGACATGATACTTGAAGACCTTCGTG
ATTATACAGCGAAACATTTTAATGATGAAGAGCAGTATATGGAGTCTATTAATTATAAAAAATTATTTACTCAAAAAATT
CAGCATCAGGAATTTATACACAAACTTGATGAATTTATTGAACATCACAATGATGAAATAAAAGATCAGGATGAACAGAT
TATGGGTATTTTAAAGTATCTCACAGAGTGGTTAGTTAATCACATCCTATATGTTGATGGTCAAATTGCAGAATTTGTAT
CAAAAATGTAA

Upstream 100 bases:

>100_bases
TGGAAGAAACCGATGATATATAAGATAATAGTGTTTTCCATTGTATACTTGTATTACGTGGATTTCAAAAGAAGAATAAG
AATGAAAGTAGGATTAATTT

Downstream 100 bases:

>100_bases
TCTTTTGAATTACTAATAAATATTATATTTGATGGTCATAATATATCTTCAGTTGGAGAGAATACCTTTTGACCATCAAA
TCCACCTGTTTGTTTGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MYEMKPEYYIGIDMIDEEHKQLFKYADDAYELLHDENTPDKYDRIDMILEDLRDYTAKHFNDEEQYMESINYKKLFTQKI
QHQEFIHKLDEFIEHHNDEIKDQDEQIMGILKYLTEWLVNHILYVDGQIAEFVSKM

Sequences:

>Translated_136_residues
MYEMKPEYYIGIDMIDEEHKQLFKYADDAYELLHDENTPDKYDRIDMILEDLRDYTAKHFNDEEQYMESINYKKLFTQKI
QHQEFIHKLDEFIEHHNDEIKDQDEQIMGILKYLTEWLVNHILYVDGQIAEFVSKM
>Mature_136_residues
MYEMKPEYYIGIDMIDEEHKQLFKYADDAYELLHDENTPDKYDRIDMILEDLRDYTAKHFNDEEQYMESINYKKLFTQKI
QHQEFIHKLDEFIEHHNDEIKDQDEQIMGILKYLTEWLVNHILYVDGQIAEFVSKM

Specific function: Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms [H]

COG id: COG2703

COG function: function code P; Hemerythrin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hemerythrin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012827
- InterPro:   IPR012312
- InterPro:   IPR016131 [H]

Pfam domain/function: PF01814 Hemerythrin [H]

EC number: NA

Molecular weight: Translated: 16735; Mature: 16735

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEMKPEYYIGIDMIDEEHKQLFKYADDAYELLHDENTPDKYDRIDMILEDLRDYTAKHF
CCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
NDEEQYMESINYKKLFTQKIQHQEFIHKLDEFIEHHNDEIKDQDEQIMGILKYLTEWLVN
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
HILYVDGQIAEFVSKM
HHHHCCCHHHHHHHCC
>Mature Secondary Structure
MYEMKPEYYIGIDMIDEEHKQLFKYADDAYELLHDENTPDKYDRIDMILEDLRDYTAKHF
CCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
NDEEQYMESINYKKLFTQKIQHQEFIHKLDEFIEHHNDEIKDQDEQIMGILKYLTEWLVN
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
HILYVDGQIAEFVSKM
HHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]