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The map label for this gene is yfbS [C]

Identifier: 238923586

GI number: 238923586

Start: 1114921

End: 1116252

Strand: Direct

Name: yfbS [C]

Synonym: EUBREC_1208

Alternate gene names: 238923586

Gene position: 1114921-1116252 (Clockwise)

Preceding gene: 238923585

Following gene: 238923587

Centisome position: 32.32

GC content: 42.57

Gene sequence:

>1332_bases
ATGGATTCTAGTATTATTTCAATTATAATTGTATTAATTACAATGGGCTTGTTTGTCTGGAATAGACTGCCGATAAGCGT
GGTTGCTATCCTTGGGTCGGTAGCAATGGCAATGTTTATTCCAGAAATGGATTTATCCGCAGTATACAGCGGATTCAGCG
CAACAGGCTGGCCGATGGTAGTCGGAATGTGTGTTGTAAGTGCCGCACTTTTTGAAACCGGAATAGCAAGAAAGATAGGA
GAAAAAATCGGAAATTCTTTTCTTGCCAAGACGGAGAGGCGGTTTATAGTAACGGTAAGTGCTGTGTGTTCATTGATGTC
AGCATTTATGAGTAACAACGGAACAGTTGCTATCTGGATGCCTATCATCGCAATCGTAGCAGCAAACTCATGTGGAAAAA
TCCGTTCAAAAATGGTTATTTTCCCAGCCGGAACAGCAGCCATTATCGGAGGTGCGTGTTCACTAATCGGCTCAACCTCA
CAGCTTGCAGCAAACTCAGTATTACAGGGATATGCCGGTTATGAGGAAGGTATGGGAATGTTTGACATGACAAAGATCAT
GTTTCCGGCAGCAGTTGTACAGATTATTTTCTGGGGAACAATCGGCTACAAGCTCCTCGACAAGGTATTAAAACCGGATA
GTCCTGACTTCGACAAGGGAAATATGTATTCAGTTGCAGAGATACATAAGCTCGAGAAAGAACAGGAGTCAGCTGCTCCG
GCATGGAAGGGCTATGTGGCACTCGGAACCATGATTTTATGCATAGTATTGTTTGTATTAAGTGGTTTCCAGCCTTTCAA
GAGCTATTTTAACATTGGTACAATCGGTCTTATAGGTGCTGCAATGGTACTTGGAACAGGCTGTATCTCGATTAAAAAAG
CATATTCGGATCTTCCTTGGGATGTTTTCGTATGTATCGGAACAATATCAGGAATCGGAACAGGACTTGATGTATCAGGT
GGTGGAGCATTAATCGCAAACGCTGTACTCAACCTCTTCGGAGGAAAGAACGCATCGGTTGTGCTTCTTACAGTAGTTAT
CGCAGTGCTTACAAGTGTGCTCACGAATATCATGTCAAACAACGCAACAGCAGCAATGCTTACACCAATCTGTATAGCAA
TTGCATTATCGCTTGGAATCAGTCCTATTCCATGGGTAATCGTAATCGGTGCCTGCTCAAACCTTGCAATAGCAACATCT
TTCGGAACAGCTGTAAATATGCAGATACTTCCGGCAGGATACAAGTTTTCGGATTTCGTAAAAATCGGTGGACCGTTACT
TATAATACTTATTGCAGTTGTTTCTATATGCAGTGTGGCATTCCTGTTCTAA

Upstream 100 bases:

>100_bases
AGTGGCCATATGTAGCCGACAAGTCAGTATATGAGCACGAGAAATGGAAGGGTGCTGACTGGGCAGAGATTTAAAATAAA
AATATATCGGGGGATATAAT

Downstream 100 bases:

>100_bases
GAATTGAGTGTCCTGAAGCGCAAATATTTGCCAGTACACCGAATAATAAATCAGTATGGAAAGTTTGTGTACATAATAAA
ACAGATACTAACAAAACAAA

Product: citrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MDSSIISIIIVLITMGLFVWNRLPISVVAILGSVAMAMFIPEMDLSAVYSGFSATGWPMVVGMCVVSAALFETGIARKIG
EKIGNSFLAKTERRFIVTVSAVCSLMSAFMSNNGTVAIWMPIIAIVAANSCGKIRSKMVIFPAGTAAIIGGACSLIGSTS
QLAANSVLQGYAGYEEGMGMFDMTKIMFPAAVVQIIFWGTIGYKLLDKVLKPDSPDFDKGNMYSVAEIHKLEKEQESAAP
AWKGYVALGTMILCIVLFVLSGFQPFKSYFNIGTIGLIGAAMVLGTGCISIKKAYSDLPWDVFVCIGTISGIGTGLDVSG
GGALIANAVLNLFGGKNASVVLLTVVIAVLTSVLTNIMSNNATAAMLTPICIAIALSLGISPIPWVIVIGACSNLAIATS
FGTAVNMQILPAGYKFSDFVKIGGPLLIILIAVVSICSVAFLF

Sequences:

>Translated_443_residues
MDSSIISIIIVLITMGLFVWNRLPISVVAILGSVAMAMFIPEMDLSAVYSGFSATGWPMVVGMCVVSAALFETGIARKIG
EKIGNSFLAKTERRFIVTVSAVCSLMSAFMSNNGTVAIWMPIIAIVAANSCGKIRSKMVIFPAGTAAIIGGACSLIGSTS
QLAANSVLQGYAGYEEGMGMFDMTKIMFPAAVVQIIFWGTIGYKLLDKVLKPDSPDFDKGNMYSVAEIHKLEKEQESAAP
AWKGYVALGTMILCIVLFVLSGFQPFKSYFNIGTIGLIGAAMVLGTGCISIKKAYSDLPWDVFVCIGTISGIGTGLDVSG
GGALIANAVLNLFGGKNASVVLLTVVIAVLTSVLTNIMSNNATAAMLTPICIAIALSLGISPIPWVIVIGACSNLAIATS
FGTAVNMQILPAGYKFSDFVKIGGPLLIILIAVVSICSVAFLF
>Mature_443_residues
MDSSIISIIIVLITMGLFVWNRLPISVVAILGSVAMAMFIPEMDLSAVYSGFSATGWPMVVGMCVVSAALFETGIARKIG
EKIGNSFLAKTERRFIVTVSAVCSLMSAFMSNNGTVAIWMPIIAIVAANSCGKIRSKMVIFPAGTAAIIGGACSLIGSTS
QLAANSVLQGYAGYEEGMGMFDMTKIMFPAAVVQIIFWGTIGYKLLDKVLKPDSPDFDKGNMYSVAEIHKLEKEQESAAP
AWKGYVALGTMILCIVLFVLSGFQPFKSYFNIGTIGLIGAAMVLGTGCISIKKAYSDLPWDVFVCIGTISGIGTGLDVSG
GGALIANAVLNLFGGKNASVVLLTVVIAVLTSVLTNIMSNNATAAMLTPICIAIALSLGISPIPWVIVIGACSNLAIATS
FGTAVNMQILPAGYKFSDFVKIGGPLLIILIAVVSICSVAFLF

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=209, Percent_Identity=31.1004784688995, Blast_Score=75, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 46322; Mature: 46322

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSSIISIIIVLITMGLFVWNRLPISVVAILGSVAMAMFIPEMDLSAVYSGFSATGWPMV
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHH
VGMCVVSAALFETGIARKIGEKIGNSFLAKTERRFIVTVSAVCSLMSAFMSNNGTVAIWM
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHEEEHHHHHHHHHHHHCCCCCEEEHH
PIIAIVAANSCGKIRSKMVIFPAGTAAIIGGACSLIGSTSQLAANSVLQGYAGYEEGMGM
HHHHHHHCCCCHHHHCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHCCCH
FDMTKIMFPAAVVQIIFWGTIGYKLLDKVLKPDSPDFDKGNMYSVAEIHKLEKEQESAAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
AWKGYVALGTMILCIVLFVLSGFQPFKSYFNIGTIGLIGAAMVLGTGCISIKKAYSDLPW
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
DVFVCIGTISGIGTGLDVSGGGALIANAVLNLFGGKNASVVLLTVVIAVLTSVLTNIMSN
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
NATAAMLTPICIAIALSLGISPIPWVIVIGACSNLAIATSFGTAVNMQILPAGYKFSDFV
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCEEEEEEEECCCCHHHHH
KIGGPLLIILIAVVSICSVAFLF
HHCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]