| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238923553
Identifier: 238923553
GI number: 238923553
Start: 1082424
End: 1084832
Strand: Direct
Name: 238923553
Synonym: EUBREC_1173
Alternate gene names: NA
Gene position: 1082424-1084832 (Clockwise)
Preceding gene: 238923552
Following gene: 238923554
Centisome position: 31.38
GC content: 46.53
Gene sequence:
>2409_bases TTGAAGTTAATAGCTTGTCACATAAACAACTTCGGAAAGCTGTCCGATCTTAATATCAATTTCAATGATGGAGTCAATGT CATAAACCAGCCAAACGGCTGGGGAAAGAGTACACTTGCGGCTTTTTTGAAGGCTATGCTGTACGGCTTTGATACGAAAA AGGAGCCGGGCGCCTTTGAGAGGGAAAGAAAGCTCTATAAGCCATGGCAGGGCGGCACTTATGGTGGAGAGCTTGATTTT GAGGCCGATGGAGTGGAGTACAGACTTGTAAGGACCTTTGGCCTCACAGAAAAGCAGGATGATTTTCACTTATACAGGCT TGCAACCATGGTTGAGTGTGATGATTTTTCACCACTGCTTGGAGAGGAGCTTTTTGACCTCGACCGCAGCTCGTTCAAGA GAACGATATACATAGCACAGGCAGACTGCATGTTTTCGTCATCAGACAGCATCAGCGCAAAGCTTGGCAATATGGCGGAA AATACAAATGACATCAACAACTTCGAGTCGGCGACAGCGGACATTAAGGACATGATGAACAAGATGTCCCCAAACCGTAT CACAGGTTCTATCAAAAAGCGTGTAAATACACTCACAGCCTTGGAACAGGAGCTTAAGAAGTATCAGGCAGCGGATGAGG CGGCAGCACAGCTTTCACAGAAAATAGATGAGAAAACTGCCCAGAAGAAGGAGCTTACCGGTATAAGAGCCGAGTACGGC AGGGCGCTTCAGGTGGCATCTGAGGACAGCAGAAAGCAGGCACTTCGTGAAAACTACGAGCAGCTTTGTGCTGTTGCAAA GGAGAAAGAGAGCATTTACAATGCTGCAATGGCAGTCTTTGGAGACAAAGCACCGGATGAGGCAGAGCTTTTGGAAAAGA CAAAGCAGGCCGGAGAGCTTGAAAGCTTAAAGGCTGTAGAAGATAATCTGAGCTTTACGCCTGAGGAGGAGCAGTATTTA GATACACTTTCAGGTATGTTTAAGGATGGTGTGCCATCTGATGATGGTCTTGATGAGATGCAAAAGAAGATTGCAAACAT CCAGAGCGTCAAGAATGAGTACAGCCACATGGAGCTCAAGCTCTCGCAGATGACCTCACTTGCAAAGATGGCAGATGATG AGGAGGAACCGGAGACACCTGAGAAGACTAAGCTTGTACCTGCGGGTATTGTGCTTATGGTTATCGGTCTTTTGGCAGCG GCTGTTGCCACGGTATTCAGTCTGAATGAGAAGTACAATGTGAAGGAAATCATGTTTCTTGTGGTAGGCATAGCTGGAGT CGCTATGGCGCTTTGCGGTGTTGTCATGATGGTCTATGGAATCCGTCTGAACAACAAAAAGCAGAGAGCATACATCAGGC TTATGGCTGAGCGTGAGGAAAATATAAAGCAAAAGGAGATACCGATTCAGGAATTAAAGGAGCAGCTTGAGCAGATTCAA AGCGGCATTACATCAATGGAGCATGAGGTATCGCAGTTTTTTGACAGCTTTTCGATTGAAGCAGATGAATCGCAGTATCA GGAGAAGCTTTATGAGCTTCGCACAAAGGCTCATGACTACAGCCGTTTCAACGAGCAGATAGGAAAGCGCGCCAAGACAA AGGCTGACTATGAGAAGGCAAAGGCTTCGCTTGATGAGTATTTAAGTCTCTATGGATATGACAGTGCTGCAGAATATACA CAGACACTTTCACAGATGAAAAAGCAGCTCGCAGAGGCCGGCTTTGCAAAGGAAAATATGGACAGTGCTCTTCAGAAGAA AACGCAGTTTGAGAATGACAACGATATGGACAAGCTTCTTGCACCAAATGAGTGTCCGTATACACTTGATGAGCTCAATG AGATGATTTCAAAGGTGGAAGGCAGCCTCGATGAAATCAGGGCATCCTTAGTGCAGTACGGCAGACAGATGGATGATCTG CAGGAGCAGCTTGATATGAGGGATGAAAAGGAGCAGGAGTATCGCAACTGCAAGCAGATACAGGCTGAGGAAAAGCATAA GTATGAGATACTTGGACTTACATCAGACTATCTGACCAGGGCAAGGGAGCAGTTTACTGCCAGATACATGGCACCTATTT CCAATGGATTCCAGAAGTACTTCGGTATCCTGACAGAAAATACAGACAGAGACTGGCAGGTGGATGCCAATATTTCAATA AGGATGAAGGAGCAGGGGCAGCTTCGCGATGTGAGAACCATGTCGGCAGGTTACAAGGACCTGATAGGCATATGTATGCG TTTTGCGCTTGTGGATGCGATGTATCCGGGCGAGAAGCCGTTCCTCATACTTGACGATCCGTTTGTGAATCTGGATGATG AGAAGCTTGCTCGAGGCAGAAGGCTGCTTGCGGTGCTTTCGCAGGATTACCAGGTGATTTATTTTACATGTCATGGAAGC CGCGAGTAA
Upstream 100 bases:
>100_bases GTTCATACGGATGGTGCTTGGCTCAGATATGACCGAGGAGCAGAAGTCTGAGGTCATCAGGTGTGGTATATCGGCGCTTA GCGGGGAGGAGATTTAGAAA
Downstream 100 bases:
>100_bases ATTTTGGTCGAAGCTTTGTTTTATATTATGGTAGCATATTTTTATTTATAGAATATAATTATATGAGGGTCAAAATATCT TTTGACCCTCATATCTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 802; Mature: 802
Protein sequence:
>802_residues MKLIACHINNFGKLSDLNINFNDGVNVINQPNGWGKSTLAAFLKAMLYGFDTKKEPGAFERERKLYKPWQGGTYGGELDF EADGVEYRLVRTFGLTEKQDDFHLYRLATMVECDDFSPLLGEELFDLDRSSFKRTIYIAQADCMFSSSDSISAKLGNMAE NTNDINNFESATADIKDMMNKMSPNRITGSIKKRVNTLTALEQELKKYQAADEAAAQLSQKIDEKTAQKKELTGIRAEYG RALQVASEDSRKQALRENYEQLCAVAKEKESIYNAAMAVFGDKAPDEAELLEKTKQAGELESLKAVEDNLSFTPEEEQYL DTLSGMFKDGVPSDDGLDEMQKKIANIQSVKNEYSHMELKLSQMTSLAKMADDEEEPETPEKTKLVPAGIVLMVIGLLAA AVATVFSLNEKYNVKEIMFLVVGIAGVAMALCGVVMMVYGIRLNNKKQRAYIRLMAEREENIKQKEIPIQELKEQLEQIQ SGITSMEHEVSQFFDSFSIEADESQYQEKLYELRTKAHDYSRFNEQIGKRAKTKADYEKAKASLDEYLSLYGYDSAAEYT QTLSQMKKQLAEAGFAKENMDSALQKKTQFENDNDMDKLLAPNECPYTLDELNEMISKVEGSLDEIRASLVQYGRQMDDL QEQLDMRDEKEQEYRNCKQIQAEEKHKYEILGLTSDYLTRAREQFTARYMAPISNGFQKYFGILTENTDRDWQVDANISI RMKEQGQLRDVRTMSAGYKDLIGICMRFALVDAMYPGEKPFLILDDPFVNLDDEKLARGRRLLAVLSQDYQVIYFTCHGS RE
Sequences:
>Translated_802_residues MKLIACHINNFGKLSDLNINFNDGVNVINQPNGWGKSTLAAFLKAMLYGFDTKKEPGAFERERKLYKPWQGGTYGGELDF EADGVEYRLVRTFGLTEKQDDFHLYRLATMVECDDFSPLLGEELFDLDRSSFKRTIYIAQADCMFSSSDSISAKLGNMAE NTNDINNFESATADIKDMMNKMSPNRITGSIKKRVNTLTALEQELKKYQAADEAAAQLSQKIDEKTAQKKELTGIRAEYG RALQVASEDSRKQALRENYEQLCAVAKEKESIYNAAMAVFGDKAPDEAELLEKTKQAGELESLKAVEDNLSFTPEEEQYL DTLSGMFKDGVPSDDGLDEMQKKIANIQSVKNEYSHMELKLSQMTSLAKMADDEEEPETPEKTKLVPAGIVLMVIGLLAA AVATVFSLNEKYNVKEIMFLVVGIAGVAMALCGVVMMVYGIRLNNKKQRAYIRLMAEREENIKQKEIPIQELKEQLEQIQ SGITSMEHEVSQFFDSFSIEADESQYQEKLYELRTKAHDYSRFNEQIGKRAKTKADYEKAKASLDEYLSLYGYDSAAEYT QTLSQMKKQLAEAGFAKENMDSALQKKTQFENDNDMDKLLAPNECPYTLDELNEMISKVEGSLDEIRASLVQYGRQMDDL QEQLDMRDEKEQEYRNCKQIQAEEKHKYEILGLTSDYLTRAREQFTARYMAPISNGFQKYFGILTENTDRDWQVDANISI RMKEQGQLRDVRTMSAGYKDLIGICMRFALVDAMYPGEKPFLILDDPFVNLDDEKLARGRRLLAVLSQDYQVIYFTCHGS RE >Mature_802_residues MKLIACHINNFGKLSDLNINFNDGVNVINQPNGWGKSTLAAFLKAMLYGFDTKKEPGAFERERKLYKPWQGGTYGGELDF EADGVEYRLVRTFGLTEKQDDFHLYRLATMVECDDFSPLLGEELFDLDRSSFKRTIYIAQADCMFSSSDSISAKLGNMAE NTNDINNFESATADIKDMMNKMSPNRITGSIKKRVNTLTALEQELKKYQAADEAAAQLSQKIDEKTAQKKELTGIRAEYG RALQVASEDSRKQALRENYEQLCAVAKEKESIYNAAMAVFGDKAPDEAELLEKTKQAGELESLKAVEDNLSFTPEEEQYL DTLSGMFKDGVPSDDGLDEMQKKIANIQSVKNEYSHMELKLSQMTSLAKMADDEEEPETPEKTKLVPAGIVLMVIGLLAA AVATVFSLNEKYNVKEIMFLVVGIAGVAMALCGVVMMVYGIRLNNKKQRAYIRLMAEREENIKQKEIPIQELKEQLEQIQ SGITSMEHEVSQFFDSFSIEADESQYQEKLYELRTKAHDYSRFNEQIGKRAKTKADYEKAKASLDEYLSLYGYDSAAEYT QTLSQMKKQLAEAGFAKENMDSALQKKTQFENDNDMDKLLAPNECPYTLDELNEMISKVEGSLDEIRASLVQYGRQMDDL QEQLDMRDEKEQEYRNCKQIQAEEKHKYEILGLTSDYLTRAREQFTARYMAPISNGFQKYFGILTENTDRDWQVDANISI RMKEQGQLRDVRTMSAGYKDLIGICMRFALVDAMYPGEKPFLILDDPFVNLDDEKLARGRRLLAVLSQDYQVIYFTCHGS RE
Specific function: Unknown
COG id: COG4717
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91294; Mature: 91294
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIACHINNFGKLSDLNINFNDGVNVINQPNGWGKSTLAAFLKAMLYGFDTKKEPGAFE CCEEEEECCCCCCEEECEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH RERKLYKPWQGGTYGGELDFEADGVEYRLVRTFGLTEKQDDFHLYRLATMVECDDFSPLL HHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEHHCCCCCCCCHHHHHHHHHHCCCCCCHHH GEELFDLDRSSFKRTIYIAQADCMFSSSDSISAKLGNMAENTNDINNFESATADIKDMMN HHHHHHCCHHHCCEEEEEEEECCEECCCCCHHHHHCCHHCCCCHHHHHHHHHHHHHHHHH KMSPNRITGSIKKRVNTLTALEQELKKYQAADEAAAQLSQKIDEKTAQKKELTGIRAEYG HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHC RALQVASEDSRKQALRENYEQLCAVAKEKESIYNAAMAVFGDKAPDEAELLEKTKQAGEL CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHH ESLKAVEDNLSFTPEEEQYLDTLSGMFKDGVPSDDGLDEMQKKIANIQSVKNEYSHMELK HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LSQMTSLAKMADDEEEPETPEKTKLVPAGIVLMVIGLLAAAVATVFSLNEKYNVKEIMFL HHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH VVGIAGVAMALCGVVMMVYGIRLNNKKQRAYIRLMAEREENIKQKEIPIQELKEQLEQIQ HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHH SGITSMEHEVSQFFDSFSIEADESQYQEKLYELRTKAHDYSRFNEQIGKRAKTKADYEKA HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KASLDEYLSLYGYDSAAEYTQTLSQMKKQLAEAGFAKENMDSALQKKTQFENDNDMDKLL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHC APNECPYTLDELNEMISKVEGSLDEIRASLVQYGRQMDDLQEQLDMRDEKEQEYRNCKQI CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH QAEEKHKYEILGLTSDYLTRAREQFTARYMAPISNGFQKYFGILTENTDRDWQVDANISI HHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEE RMKEQGQLRDVRTMSAGYKDLIGICMRFALVDAMYPGEKPFLILDDPFVNLDDEKLARGR EECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHH RLLAVLSQDYQVIYFTCHGSRE HHHHHHHCCCEEEEEEECCCCC >Mature Secondary Structure MKLIACHINNFGKLSDLNINFNDGVNVINQPNGWGKSTLAAFLKAMLYGFDTKKEPGAFE CCEEEEECCCCCCEEECEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH RERKLYKPWQGGTYGGELDFEADGVEYRLVRTFGLTEKQDDFHLYRLATMVECDDFSPLL HHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEHHCCCCCCCCHHHHHHHHHHCCCCCCHHH GEELFDLDRSSFKRTIYIAQADCMFSSSDSISAKLGNMAENTNDINNFESATADIKDMMN HHHHHHCCHHHCCEEEEEEEECCEECCCCCHHHHHCCHHCCCCHHHHHHHHHHHHHHHHH KMSPNRITGSIKKRVNTLTALEQELKKYQAADEAAAQLSQKIDEKTAQKKELTGIRAEYG HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHC RALQVASEDSRKQALRENYEQLCAVAKEKESIYNAAMAVFGDKAPDEAELLEKTKQAGEL CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHH ESLKAVEDNLSFTPEEEQYLDTLSGMFKDGVPSDDGLDEMQKKIANIQSVKNEYSHMELK HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LSQMTSLAKMADDEEEPETPEKTKLVPAGIVLMVIGLLAAAVATVFSLNEKYNVKEIMFL HHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH VVGIAGVAMALCGVVMMVYGIRLNNKKQRAYIRLMAEREENIKQKEIPIQELKEQLEQIQ HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHH SGITSMEHEVSQFFDSFSIEADESQYQEKLYELRTKAHDYSRFNEQIGKRAKTKADYEKA HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KASLDEYLSLYGYDSAAEYTQTLSQMKKQLAEAGFAKENMDSALQKKTQFENDNDMDKLL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHC APNECPYTLDELNEMISKVEGSLDEIRASLVQYGRQMDDLQEQLDMRDEKEQEYRNCKQI CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH QAEEKHKYEILGLTSDYLTRAREQFTARYMAPISNGFQKYFGILTENTDRDWQVDANISI HHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEE RMKEQGQLRDVRTMSAGYKDLIGICMRFALVDAMYPGEKPFLILDDPFVNLDDEKLARGR EECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHH RLLAVLSQDYQVIYFTCHGSRE HHHHHHHCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA