| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238923518
Identifier: 238923518
GI number: 238923518
Start: 1053522
End: 1054289
Strand: Direct
Name: 238923518
Synonym: EUBREC_1138
Alternate gene names: NA
Gene position: 1053522-1054289 (Clockwise)
Preceding gene: 238923517
Following gene: 238923519
Centisome position: 30.54
GC content: 42.06
Gene sequence:
>768_bases ATGAAAAAAATAGTACAGACAGCAGGAAGAAATACACTTGGTGAATTCGCACCGGAATTTGCACATTTTAACGATGATGT ACTTTTTGGCGAAAACTGGAATAACCGGGATATCGATGTAAAAACAAGAAGTACTATCACAGTGGTTGCGCTGATGGCTT CCGGAATTACGGATTCTTCTTTAAAATATCATCTTCAAAATGCAAAAAATCATGGTGTGACACAAAAAGAGATTGCTGCA GTAATCACACATGCCGCATTCTATGCAGGTTGGCCAAAAGCATGGGCTGTTTTCAATCTTGCAAAGGAAGTGTGGGAGGC AGGTGAAGGAGATTTGCCATACGAAGAGGAAGCAATGCGTGCACATGCAAAAGAGATGGTATTTCCAATCGGTGCACCAA ACGATGGCTTTGCACAGTATTTTTCCGGCAGAAGTTTTCTTGCACCGATCTCTACTTCTCAGGTTGGAATTTTTAATGTG ACATTTGAACCTGGATGCAGAAATAACTGGCACATCCATCATGCAAAAAGTGGAGGCGGGCAGATCCTGGTATGTGTTGC CGGAAGAGGATATTATCAGGAAGAAGGTAAAGAAGCTGTAGAAATGAAGCCAGGTGACTGCATCAATATTCCTACAGGTG TTAAGCACTGGCATGGAGCCGCACCGGATGAATGGTTTTCACATCTGGCAATAGAAGTGCCAGGTGAAAATAGTTCCAAT GAATGGCTTGAACCGGTAAGTGATGAAGAATATAGAAAACTAAAATAG
Upstream 100 bases:
>100_bases CAATTTAGGCAAGGCAGATTGCTAAATTGTGGAACGAAACAGGAAATCAGTGAATGGGTAAACTCTTTATAAATAACAGC GTTATGGAGGTATACAGAAT
Downstream 100 bases:
>100_bases GAATCATTGGCTGGGGTGGAATGGCTCTTAACGCAGCTGCACTGGATACAAGAATAAAAGCAACCGTTGCATCTACCATG TATGATATGACAAGGGTAAA
Product: gamma-carboxymuconolactone decarboxylase subunit-like protein
Products: NA
Alternate protein names: Carboxymuconolactone Decarboxylase; Cupin 2 Domain-Containing Protein; 4-Carboxymuconolactone Decarboxylase; Carboxymuconolactone Decarboxylase Family Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Barrel; Cupin Domain Protein; Transcriptional Regulator; Double-Stranded Beta-Helix-Like Protein; Cupin Region; Cupin Family Protein; Gamma-Carboxymuconolactone Decarboxylase Subunit; Cupin 2 Barrel Domain-Containing Protein; Conserved Protein; RmlC-Type Cupin; Carboxymuconolactone Decarboxylase Protein; LOW QUALITY PROTEIN Cupin Domain-Containing Protein; ABC-2 Type Transporter; 4-Carboxymuconolactone Decarboxylase Protein; LOW QUALITY PROTEIN Carboxymuconolactone Decarboxylase; Double-Stranded Beta-Helix Protein; Cupin Domain-Containing Protein; Secreted Protein; Exported RmlC-Type Cupin; Gamma-Carboxymuconolactone Decarboxylase; Decarboxylase
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MKKIVQTAGRNTLGEFAPEFAHFNDDVLFGENWNNRDIDVKTRSTITVVALMASGITDSSLKYHLQNAKNHGVTQKEIAA VITHAAFYAGWPKAWAVFNLAKEVWEAGEGDLPYEEEAMRAHAKEMVFPIGAPNDGFAQYFSGRSFLAPISTSQVGIFNV TFEPGCRNNWHIHHAKSGGGQILVCVAGRGYYQEEGKEAVEMKPGDCINIPTGVKHWHGAAPDEWFSHLAIEVPGENSSN EWLEPVSDEEYRKLK
Sequences:
>Translated_255_residues MKKIVQTAGRNTLGEFAPEFAHFNDDVLFGENWNNRDIDVKTRSTITVVALMASGITDSSLKYHLQNAKNHGVTQKEIAA VITHAAFYAGWPKAWAVFNLAKEVWEAGEGDLPYEEEAMRAHAKEMVFPIGAPNDGFAQYFSGRSFLAPISTSQVGIFNV TFEPGCRNNWHIHHAKSGGGQILVCVAGRGYYQEEGKEAVEMKPGDCINIPTGVKHWHGAAPDEWFSHLAIEVPGENSSN EWLEPVSDEEYRKLK >Mature_255_residues MKKIVQTAGRNTLGEFAPEFAHFNDDVLFGENWNNRDIDVKTRSTITVVALMASGITDSSLKYHLQNAKNHGVTQKEIAA VITHAAFYAGWPKAWAVFNLAKEVWEAGEGDLPYEEEAMRAHAKEMVFPIGAPNDGFAQYFSGRSFLAPISTSQVGIFNV TFEPGCRNNWHIHHAKSGGGQILVCVAGRGYYQEEGKEAVEMKPGDCINIPTGVKHWHGAAPDEWFSHLAIEVPGENSSN EWLEPVSDEEYRKLK
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28306; Mature: 28306
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIVQTAGRNTLGEFAPEFAHFNDDVLFGENWNNRDIDVKTRSTITVVALMASGITDSS CCHHHHHCCCCCHHHHHHHHHCCCCCEEECCCCCCCEEEEECCCHHEEEEHHHCCCCCCH LKYHLQNAKNHGVTQKEIAAVITHAAFYAGWPKAWAVFNLAKEVWEAGEGDLPYEEEAMR HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH AHAKEMVFPIGAPNDGFAQYFSGRSFLAPISTSQVGIFNVTFEPGCRNNWHIHHAKSGGG HHHHHHEEECCCCCCHHHHHHCCCCEEEECCCCCEEEEEEEECCCCCCCCEEEEECCCCC QILVCVAGRGYYQEEGKEAVEMKPGDCINIPTGVKHWHGAAPDEWFSHLAIEVPGENSSN EEEEEEECCCCCHHCCCCEEECCCCCEEECCCCCHHHCCCCHHHHHHEEEEECCCCCCCC EWLEPVSDEEYRKLK CCCCCCCCCHHHCCC >Mature Secondary Structure MKKIVQTAGRNTLGEFAPEFAHFNDDVLFGENWNNRDIDVKTRSTITVVALMASGITDSS CCHHHHHCCCCCHHHHHHHHHCCCCCEEECCCCCCCEEEEECCCHHEEEEHHHCCCCCCH LKYHLQNAKNHGVTQKEIAAVITHAAFYAGWPKAWAVFNLAKEVWEAGEGDLPYEEEAMR HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH AHAKEMVFPIGAPNDGFAQYFSGRSFLAPISTSQVGIFNVTFEPGCRNNWHIHHAKSGGG HHHHHHEEECCCCCCHHHHHHCCCCEEEECCCCCEEEEEEEECCCCCCCCEEEEECCCCC QILVCVAGRGYYQEEGKEAVEMKPGDCINIPTGVKHWHGAAPDEWFSHLAIEVPGENSSN EEEEEEECCCCCHHCCCCEEECCCCCEEECCCCCHHHCCCCHHHHHHEEEEECCCCCCCC EWLEPVSDEEYRKLK CCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA