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The map label for this gene is 238923514

Identifier: 238923514

GI number: 238923514

Start: 1048833

End: 1050104

Strand: Direct

Name: 238923514

Synonym: EUBREC_1134

Alternate gene names: NA

Gene position: 1048833-1050104 (Clockwise)

Preceding gene: 238923513

Following gene: 238923515

Centisome position: 30.4

GC content: 44.03

Gene sequence:

>1272_bases
ATGAGTATAGTGGATAAATTTGGAGAAAAAGTAGGCGAGATAGCAGAAAACGATCCTGTCAAGGCGAGGAAGCTTTTGCT
TGCAGGATATAGATTACAGGAAAAGAGATTAGCATTATTTCCGGACAGAAAGCTTCCAATGTCAGGGCAGTATGTGGCAA
AGATTGTCATGAATAATATCATACAGGCACTTGCAAAGCCTGAAAATGCCGCCATGGTCAGTATTTTTGTACCGGGTGAG
CTTTTGACGGCGGCAGGTCTCACACCATATTCGGTTGAGGCATTATCGTGCTTTATTGCAGGAACTAAATGTGAGCAGGC
CTTTCTAAGGCAGACTGAGAAGGAAGGCTTTCCGGAAACTATGTGCTCTTATCACAGAGTTTTTCTGGGCGCAGCCTTAA
ATGGTATAGTGCCAAAGCCAAAGTGCATGGTGTATACAAACCTGGCATGCGATGGCAATATGATGACATTTCCGTATCTC
AAGGAGAGATATGAAATACCAAGCTTTTATATAGATGTTCCATATGAGAAGAATTATGACTCTGTTATGTATGTAGCAAA
GCAGCTTAGAGAGCTTAAGAGTTTTTTACAGGATGTCACCGGCAGAGAAATCACAGAGGAGTCTGTGAAAAAGGCTGTAG
ATAAGAGCAAAATTGCATCAAATAATTATTACAGGCAGCTTCACCTGAGAAAAGGACATGATATTGCGTCAACTCTCACA
AATGAGCTGTATGCGCTTTTCATGTGTCATCTGCTTGCAGGAACTGATGAATCAGTCAGATATACACAGCTTCTGAGAGA
TGATGTGAGACGTGCACCTGCAGGCGATGGATTTCATGTACTTTGGATGCACACCATGCCGTTTTTGCAGGATGCAGTGA
AGGATGTGTTCAATTACAGTGATACAATCCATATCAGTGCAAGCGATTTTATAGCGGATGGTTTCAGAAGCATGGAGTCG
GATGATCCTTACGAGGCACTTGCCGAAAAAATGGTTTACTGCATTTATAATGGCAGCGTGAACCAGAGAATAGATGAGGC
AAAGGAGCTTGCCGACACAGTTGGAGCAGACGGTGCTGTACTTTTTGCGCACTGGGGCTGTAAGAATACAATCGGTGCAT
CAAGCCTTATAAAGCGCTCACTCGAGAGGGAAGGGCTTCCAACTATGGTTTTAGACGGAGACGGCTGCAACCCGGCAAAT
GCCAGTGACGGACAGATTTCCACAAGGCTTCAGGCATTTGTGGAGATGCTTACAGAGCAGGAACGTAATTAG

Upstream 100 bases:

>100_bases
ATAGCTAAAATGGGAGTTTACTTTTTGTGCACAATTGCTATAATAGTATGGTGAACCGAATATTTATATATCTGAATATA
GAAAAGAGCTGAAATATCAC

Downstream 100 bases:

>100_bases
AAATAATACACCGGTTATTGTGTGCGGTGTGTGGATATTTACTATAAAACAATTTCAGAAAGTGGAAAACAGATGATAAA
TTATGTTTGTAAATATGCTC

Product: putative R-2-hydroxyglutaryl-CoA dehydratase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MSIVDKFGEKVGEIAENDPVKARKLLLAGYRLQEKRLALFPDRKLPMSGQYVAKIVMNNIIQALAKPENAAMVSIFVPGE
LLTAAGLTPYSVEALSCFIAGTKCEQAFLRQTEKEGFPETMCSYHRVFLGAALNGIVPKPKCMVYTNLACDGNMMTFPYL
KERYEIPSFYIDVPYEKNYDSVMYVAKQLRELKSFLQDVTGREITEESVKKAVDKSKIASNNYYRQLHLRKGHDIASTLT
NELYALFMCHLLAGTDESVRYTQLLRDDVRRAPAGDGFHVLWMHTMPFLQDAVKDVFNYSDTIHISASDFIADGFRSMES
DDPYEALAEKMVYCIYNGSVNQRIDEAKELADTVGADGAVLFAHWGCKNTIGASSLIKRSLEREGLPTMVLDGDGCNPAN
ASDGQISTRLQAFVEMLTEQERN

Sequences:

>Translated_423_residues
MSIVDKFGEKVGEIAENDPVKARKLLLAGYRLQEKRLALFPDRKLPMSGQYVAKIVMNNIIQALAKPENAAMVSIFVPGE
LLTAAGLTPYSVEALSCFIAGTKCEQAFLRQTEKEGFPETMCSYHRVFLGAALNGIVPKPKCMVYTNLACDGNMMTFPYL
KERYEIPSFYIDVPYEKNYDSVMYVAKQLRELKSFLQDVTGREITEESVKKAVDKSKIASNNYYRQLHLRKGHDIASTLT
NELYALFMCHLLAGTDESVRYTQLLRDDVRRAPAGDGFHVLWMHTMPFLQDAVKDVFNYSDTIHISASDFIADGFRSMES
DDPYEALAEKMVYCIYNGSVNQRIDEAKELADTVGADGAVLFAHWGCKNTIGASSLIKRSLEREGLPTMVLDGDGCNPAN
ASDGQISTRLQAFVEMLTEQERN
>Mature_422_residues
SIVDKFGEKVGEIAENDPVKARKLLLAGYRLQEKRLALFPDRKLPMSGQYVAKIVMNNIIQALAKPENAAMVSIFVPGEL
LTAAGLTPYSVEALSCFIAGTKCEQAFLRQTEKEGFPETMCSYHRVFLGAALNGIVPKPKCMVYTNLACDGNMMTFPYLK
ERYEIPSFYIDVPYEKNYDSVMYVAKQLRELKSFLQDVTGREITEESVKKAVDKSKIASNNYYRQLHLRKGHDIASTLTN
ELYALFMCHLLAGTDESVRYTQLLRDDVRRAPAGDGFHVLWMHTMPFLQDAVKDVFNYSDTIHISASDFIADGFRSMESD
DPYEALAEKMVYCIYNGSVNQRIDEAKELADTVGADGAVLFAHWGCKNTIGASSLIKRSLEREGLPTMVLDGDGCNPANA
SDGQISTRLQAFVEMLTEQERN

Specific function: Unknown

COG id: COG1775

COG function: function code E; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjiM [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010327 [H]

Pfam domain/function: PF06050 HGD-D [H]

EC number: NA

Molecular weight: Translated: 47375; Mature: 47244

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIVDKFGEKVGEIAENDPVKARKLLLAGYRLQEKRLALFPDRKLPMSGQYVAKIVMNNI
CCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCCCCEECCCCCCCCCHHHHHHHHHHHH
IQALAKPENAAMVSIFVPGELLTAAGLTPYSVEALSCFIAGTKCEQAFLRQTEKEGFPET
HHHHHCCCCCEEEEEEECCHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHH
MCSYHRVFLGAALNGIVPKPKCMVYTNLACDGNMMTFPYLKERYEIPSFYIDVPYEKNYD
HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEECHHHHHHHCCCEEEEECCCCCCCH
SVMYVAKQLRELKSFLQDVTGREITEESVKKAVDKSKIASNNYYRQLHLRKGHDIASTLT
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHH
NELYALFMCHLLAGTDESVRYTQLLRDDVRRAPAGDGFHVLWMHTMPFLQDAVKDVFNYS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCC
DTIHISASDFIADGFRSMESDDPYEALAEKMVYCIYNGSVNQRIDEAKELADTVGADGAV
CEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHCCCCEE
LFAHWGCKNTIGASSLIKRSLEREGLPTMVLDGDGCNPANASDGQISTRLQAFVEMLTEQ
EEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
ERN
CCC
>Mature Secondary Structure 
SIVDKFGEKVGEIAENDPVKARKLLLAGYRLQEKRLALFPDRKLPMSGQYVAKIVMNNI
CHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCCCCEECCCCCCCCCHHHHHHHHHHHH
IQALAKPENAAMVSIFVPGELLTAAGLTPYSVEALSCFIAGTKCEQAFLRQTEKEGFPET
HHHHHCCCCCEEEEEEECCHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHH
MCSYHRVFLGAALNGIVPKPKCMVYTNLACDGNMMTFPYLKERYEIPSFYIDVPYEKNYD
HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEECHHHHHHHCCCEEEEECCCCCCCH
SVMYVAKQLRELKSFLQDVTGREITEESVKKAVDKSKIASNNYYRQLHLRKGHDIASTLT
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHH
NELYALFMCHLLAGTDESVRYTQLLRDDVRRAPAGDGFHVLWMHTMPFLQDAVKDVFNYS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCC
DTIHISASDFIADGFRSMESDDPYEALAEKMVYCIYNGSVNQRIDEAKELADTVGADGAV
CEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHCCCCEE
LFAHWGCKNTIGASSLIKRSLEREGLPTMVLDGDGCNPANASDGQISTRLQAFVEMLTEQ
EEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
ERN
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]