| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is uvrX [H]
Identifier: 238923511
GI number: 238923511
Start: 1045694
End: 1047394
Strand: Direct
Name: uvrX [H]
Synonym: EUBREC_1131
Alternate gene names: 238923511
Gene position: 1045694-1047394 (Clockwise)
Preceding gene: 238923510
Following gene: 238923512
Centisome position: 30.31
GC content: 45.21
Gene sequence:
>1701_bases ATGGACAAGCATAATGAAGAGCACATTTATGTGGCAATAGATTTAAAATCATTTTACGCATCAGTAGAGTGCAGAGAGAG GGGAAAGGATGCTCTGACCACTAATCTGGTCGTGGCAGATCCAACCCGCACGGAGAAGACTATCTGTCTTGCAGTATCGC CGGCTCTTAAGGCATATGGCATACCGGGCAGGGCGCGCCTTTTTGAGGTGGTACAGCGTGTGAAGGAGGTAAACAAGCTG CGTCTGTCGAAGCTTATGGCGAGTGGACATGCTGCCGGGACAGTGGAGAGAAGAAAAAAATATGTAACAGAAATTGATAT AGCAGAAAATGATATAACAGAAAGCACAATGGCAGGCTTTGATTATGCATCATATAATGCGAATCTGCTTGACGCACATC CTGAGTATGAGCTGACATACATTGTTGCACCGCCGCGTATGGCTTTGTATATGGATTACAGTACACGCATATACAATATT TATCTTAAGTATATCGCACCTGAGGATATCAGTGTTTACTCGATAGATGAGGTTTTTATGGATGTGACACACTATCTTCG CACTTATCACATGACGGCAAGGGAGCTTGCGTCTAAGATGATAGACGATGTCCTTAAGGATACCGGTATCACGGCAACCT GCGGCATTGGTACCAATCTGTATCTGTGCAAGATAGCCATGGATATTATGGCAAAGCATGCCATGCCTGATGAACGAGGA GTGCGTATAGCAGAGCTTAATGAGAATAGCTATAGGCGAAAGCTATGGGACCACAGGCCGATTACCGATTTCTGGAGAGT GGGAGCAGGTTATGCCAAAAAGCTCGAGGCAGCCGGCATGTATACAATGGGAGATGTGGCTAGGTGCTCAACAGGCGGTT CAAATGATTTTTACAATGAGGAAAAGCTGTATAAGATGTTTGGCATCAATGCAGAGCTTCTTATAGACCATGCATGGGGG TATGAGCCTGTTACAATAGCTGATATCAAGGCATACAGACCGCAGACCAACAGCATCAGCTCAGGGCAGGTGCTTCAGGA GCCGTATGATTATGAGAAGACAAAGCTTATTGTGCGTGAGATGACGGACCTTCTTGTGCTTGATCTGGTAGATAAGAGGC TGGTTACAGACCAGATAGTACTCACTATTGGATATGATATCGCTAATCTGTCTAATAAGGCTGATAGCTGTTTGGGCAAT AATTATGACCATGCAGTAAATAATAAAGGCAGAGACAGTATTGGCGGTAAGAAAGGTACACACAGAGATTATACAGGTGA GATTACCATAGACCGATACGGCAGAAAGGTTCCAAAGCATGCACATGGTACAGCAAATTTAGGGCGTTATACGTCATCCA CGCGCATCATCATGGATGCGGTGATGGAGCTTTATGACCGTATCATAGATCCTTCTCTTCTGACACGCAGGATTACTGTG GTGGCAAACAGGGTCTGTGATGAGAGCAAGGTGCAGGAAAGTGAGCAGTTCGAGCAGCTTGATTTATTTACGGATTATCA GGCGAGGGCTAAGGAAAAGAAGAAAGAGGATGAGGCACTTTCCAAGGAGAGAAAGCTTCAGGAGGCTATGATTTCCGTCA AGAAGAAATATGGAAAGAATGCCATGCTAAAGGGCATGAATCTTGAGGAGGGGGCCACAACTATTTCAAGGAACAATCAG ATTGGCGGACACAAGGCATAG
Upstream 100 bases:
>100_bases TAAACTGTGCTGTAGCGGCATTTTCTTATGTGGTGACAATAATCCACATACACAAACATATGTTCTTGACAATTGAGCGT AATCAATGTAGAATTGCAGT
Downstream 100 bases:
>100_bases CAGCAACCGCTGTGGTTCTTAATCGGATTTTTTTTAGTGGTTTAAAATAGTTACGAAAAAGTATATAAGGAGCATGGCAT GGGAAAATATGATGATATTA
Product: hypothetical protein in ImpB/MucB/SamB family of UV repair proteins
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 566; Mature: 566
Protein sequence:
>566_residues MDKHNEEHIYVAIDLKSFYASVECRERGKDALTTNLVVADPTRTEKTICLAVSPALKAYGIPGRARLFEVVQRVKEVNKL RLSKLMASGHAAGTVERRKKYVTEIDIAENDITESTMAGFDYASYNANLLDAHPEYELTYIVAPPRMALYMDYSTRIYNI YLKYIAPEDISVYSIDEVFMDVTHYLRTYHMTARELASKMIDDVLKDTGITATCGIGTNLYLCKIAMDIMAKHAMPDERG VRIAELNENSYRRKLWDHRPITDFWRVGAGYAKKLEAAGMYTMGDVARCSTGGSNDFYNEEKLYKMFGINAELLIDHAWG YEPVTIADIKAYRPQTNSISSGQVLQEPYDYEKTKLIVREMTDLLVLDLVDKRLVTDQIVLTIGYDIANLSNKADSCLGN NYDHAVNNKGRDSIGGKKGTHRDYTGEITIDRYGRKVPKHAHGTANLGRYTSSTRIIMDAVMELYDRIIDPSLLTRRITV VANRVCDESKVQESEQFEQLDLFTDYQARAKEKKKEDEALSKERKLQEAMISVKKKYGKNAMLKGMNLEEGATTISRNNQ IGGHKA
Sequences:
>Translated_566_residues MDKHNEEHIYVAIDLKSFYASVECRERGKDALTTNLVVADPTRTEKTICLAVSPALKAYGIPGRARLFEVVQRVKEVNKL RLSKLMASGHAAGTVERRKKYVTEIDIAENDITESTMAGFDYASYNANLLDAHPEYELTYIVAPPRMALYMDYSTRIYNI YLKYIAPEDISVYSIDEVFMDVTHYLRTYHMTARELASKMIDDVLKDTGITATCGIGTNLYLCKIAMDIMAKHAMPDERG VRIAELNENSYRRKLWDHRPITDFWRVGAGYAKKLEAAGMYTMGDVARCSTGGSNDFYNEEKLYKMFGINAELLIDHAWG YEPVTIADIKAYRPQTNSISSGQVLQEPYDYEKTKLIVREMTDLLVLDLVDKRLVTDQIVLTIGYDIANLSNKADSCLGN NYDHAVNNKGRDSIGGKKGTHRDYTGEITIDRYGRKVPKHAHGTANLGRYTSSTRIIMDAVMELYDRIIDPSLLTRRITV VANRVCDESKVQESEQFEQLDLFTDYQARAKEKKKEDEALSKERKLQEAMISVKKKYGKNAMLKGMNLEEGATTISRNNQ IGGHKA >Mature_566_residues MDKHNEEHIYVAIDLKSFYASVECRERGKDALTTNLVVADPTRTEKTICLAVSPALKAYGIPGRARLFEVVQRVKEVNKL RLSKLMASGHAAGTVERRKKYVTEIDIAENDITESTMAGFDYASYNANLLDAHPEYELTYIVAPPRMALYMDYSTRIYNI YLKYIAPEDISVYSIDEVFMDVTHYLRTYHMTARELASKMIDDVLKDTGITATCGIGTNLYLCKIAMDIMAKHAMPDERG VRIAELNENSYRRKLWDHRPITDFWRVGAGYAKKLEAAGMYTMGDVARCSTGGSNDFYNEEKLYKMFGINAELLIDHAWG YEPVTIADIKAYRPQTNSISSGQVLQEPYDYEKTKLIVREMTDLLVLDLVDKRLVTDQIVLTIGYDIANLSNKADSCLGN NYDHAVNNKGRDSIGGKKGTHRDYTGEITIDRYGRKVPKHAHGTANLGRYTSSTRIIMDAVMELYDRIIDPSLLTRRITV VANRVCDESKVQESEQFEQLDLFTDYQARAKEKKKEDEALSKERKLQEAMISVKKKYGKNAMLKGMNLEEGATTISRNNQ IGGHKA
Specific function: Involved In Uv Protection And Mutation. Essential For Induced (Or Sos) Mutagenesis. May Modify The DNA Replication Machinery To Allow Bypass Synthesis Across A Damaged Template. [C]
COG id: COG0389
COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 umuC domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017962 - InterPro: IPR017961 - InterPro: IPR001126 - InterPro: IPR017963 [H]
Pfam domain/function: PF00817 IMS [H]
EC number: NA
Molecular weight: Translated: 64161; Mature: 64161
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: PS50173 UMUC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKHNEEHIYVAIDLKSFYASVECRERGKDALTTNLVVADPTRTEKTICLAVSPALKAYG CCCCCCCEEEEEEEHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCEEEEEECCHHHHCC IPGRARLFEVVQRVKEVNKLRLSKLMASGHAAGTVERRKKYVTEIDIAENDITESTMAGF CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEECCCCCCCHHHHCCC DYASYNANLLDAHPEYELTYIVAPPRMALYMDYSTRIYNIYLKYIAPEDISVYSIDEVFM CCCCCCCCEECCCCCEEEEEEECCCCEEEEEECCCEEEEEEEEEECCCCCEEEEHHHHHH DVTHYLRTYHMTARELASKMIDDVLKDTGITATCGIGTNLYLCKIAMDIMAKHAMPDERG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHC VRIAELNENSYRRKLWDHRPITDFWRVGAGYAKKLEAAGMYTMGDVARCSTGGSNDFYNE CEEEECCCCHHHHHHCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCHHHCCCCCCCCCCCH EKLYKMFGINAELLIDHAWGYEPVTIADIKAYRPQTNSISSGQVLQEPYDYEKTKLIVRE HHHHHHHCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCHHCCCCCHHHHHHHHHH MTDLLVLDLVDKRLVTDQIVLTIGYDIANLSNKADSCLGNNYDHAVNNKGRDSIGGKKGT HHHHHHHHHHHHHHHHCEEEEEECCHHHHCCCHHHHHHCCCCCHHCCCCCCCCCCCCCCC HRDYTGEITIDRYGRKVPKHAHGTANLGRYTSSTRIIMDAVMELYDRIIDPSLLTRRITV CCCCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH VANRVCDESKVQESEQFEQLDLFTDYQARAKEKKKEDEALSKERKLQEAMISVKKKYGKN HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AMLKGMNLEEGATTISRNNQIGGHKA CEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDKHNEEHIYVAIDLKSFYASVECRERGKDALTTNLVVADPTRTEKTICLAVSPALKAYG CCCCCCCEEEEEEEHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCEEEEEECCHHHHCC IPGRARLFEVVQRVKEVNKLRLSKLMASGHAAGTVERRKKYVTEIDIAENDITESTMAGF CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEECCCCCCCHHHHCCC DYASYNANLLDAHPEYELTYIVAPPRMALYMDYSTRIYNIYLKYIAPEDISVYSIDEVFM CCCCCCCCEECCCCCEEEEEEECCCCEEEEEECCCEEEEEEEEEECCCCCEEEEHHHHHH DVTHYLRTYHMTARELASKMIDDVLKDTGITATCGIGTNLYLCKIAMDIMAKHAMPDERG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHC VRIAELNENSYRRKLWDHRPITDFWRVGAGYAKKLEAAGMYTMGDVARCSTGGSNDFYNE CEEEECCCCHHHHHHCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCHHHCCCCCCCCCCCH EKLYKMFGINAELLIDHAWGYEPVTIADIKAYRPQTNSISSGQVLQEPYDYEKTKLIVRE HHHHHHHCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCHHCCCCCHHHHHHHHHH MTDLLVLDLVDKRLVTDQIVLTIGYDIANLSNKADSCLGNNYDHAVNNKGRDSIGGKKGT HHHHHHHHHHHHHHHHCEEEEEECCHHHHCCCHHHHHHCCCCCHHCCCCCCCCCCCCCCC HRDYTGEITIDRYGRKVPKHAHGTANLGRYTSSTRIIMDAVMELYDRIIDPSLLTRRITV CCCCCCEEEEEHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH VANRVCDESKVQESEQFEQLDLFTDYQARAKEKKKEDEALSKERKLQEAMISVKKKYGKN HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AMLKGMNLEEGATTISRNNQIGGHKA CEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9722542; 9384377 [H]