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The map label for this gene is hofB [C]

Identifier: 238923482

GI number: 238923482

Start: 1008104

End: 1009345

Strand: Direct

Name: hofB [C]

Synonym: EUBREC_1102

Alternate gene names: 238923482

Gene position: 1008104-1009345 (Clockwise)

Preceding gene: 238923481

Following gene: 238923483

Centisome position: 29.22

GC content: 38.89

Gene sequence:

>1242_bases
ATGTATATGCAGATTAATGAAGAAGAGCTTGTTGATGACATAAAACGTTTTGTAAGTGAAAATGTATCCTTGAGCAAAAT
ATCAGATGAAGAACTTGCGGAAAGAATAGATCAGATAGTTACAGACAGGCTTAAGGATATTTACTGTCCTATTGAGACAA
AGGTATCAATATCACAGCAGGTATATAGCTCTATAAGAGGATTTGGCTTATTAGATTCGATTATCAGTGATGATTCAATT
ACAGAGGTTATGATTAATGGACCTGAAAAGATTTTTATTGAGAAAAAAGGACGACTTACACGCCTTGATAAGAAGTTTGA
GAGTCAGAGAAAGCTGGAGGATGTCATACAAAGAATTGTAGGATTGGCAGGACGAGAAGTGAATCAGGCTAATCCCATAT
GTGATACCAGGCTTCCGGATGGCTCGCGTGTGAATGTGGTATTGCCTCCGATTGCTTTATGTGGTCCAACGATTACTATT
CGTAAGTTTTCAAAAGAACCGATGACTATAAATAAGCTTATTGAATATGGCTCTATAACACAGGAAATAGCAGATAAGCT
GGAGCTTTTGGTGAAAGCCAAATACAATATTTTTATTAGTGGTGGTACAGGCTCCGGAAAAACAACATTTCTTAATGCTC
TTTCCAATTTTATTCCTAAGGATGAAAGAATTATTACAATTGAGGATTCAGCAGAGCTTCAGATTGCAGGAATTGATAAT
CTGGTTAGTCTGGAGACTAGAAATGCAAATGCTTCAGGTGCCGGGCAGATTACAATAAGAGACTTAATTAAATCATCTCT
TCGAATGCGTCCTGAAAGGATAATAGTAGGTGAGTGTCGAGGAGGAGAAGCTCTTGATATGCTTCAGGCTATGAATACAG
GACATGATGGTTCGTTGTCTACAGGACATGCTAACTCTACTGAGGATATGCTCAGCCGACTCGAGACAATGGTGCTGCAG
GGGGCTGACGGGCTTCCAATTGAGGCAATAAAGCAGCAGATTGCATCGGCAGTTGATATTATAATTCATTTATCAAGACT
TAGGGATAAAAGCAGAAAGACCATGGCTATAACAGAAGTAGTTGGCATCAAAAATGGAGAGATAGAGTTAAACCCACTGT
ATGAGTTTAAAGAGGATGAAAACAGCACAATGGATAAGGTATCAGGAAGACTGGTCAGAACCGGCAATCCATTGAAGAAC
GACTACAAGCTTAAGCTGTCAGGTATAAAAACAGCCATATAG

Upstream 100 bases:

>100_bases
CTATTGGCGGAGCACCACGATATGAACATGCTACAGTCCGACAGATAATAGAAGCATTGACCAAGATGGAATTTTTTGAA
GAAATCTTGCAATAGAGGGA

Downstream 100 bases:

>100_bases
GTGAATTTATGAAGAAAAAAAACAAAGAGAAAAAAGTTCTGGAACCACAATACTATACATCACGGATAAATACAAGTACA
TATAATTACAAGGTCTATTA

Product: putative secretion ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MYMQINEEELVDDIKRFVSENVSLSKISDEELAERIDQIVTDRLKDIYCPIETKVSISQQVYSSIRGFGLLDSIISDDSI
TEVMINGPEKIFIEKKGRLTRLDKKFESQRKLEDVIQRIVGLAGREVNQANPICDTRLPDGSRVNVVLPPIALCGPTITI
RKFSKEPMTINKLIEYGSITQEIADKLELLVKAKYNIFISGGTGSGKTTFLNALSNFIPKDERIITIEDSAELQIAGIDN
LVSLETRNANASGAGQITIRDLIKSSLRMRPERIIVGECRGGEALDMLQAMNTGHDGSLSTGHANSTEDMLSRLETMVLQ
GADGLPIEAIKQQIASAVDIIIHLSRLRDKSRKTMAITEVVGIKNGEIELNPLYEFKEDENSTMDKVSGRLVRTGNPLKN
DYKLKLSGIKTAI

Sequences:

>Translated_413_residues
MYMQINEEELVDDIKRFVSENVSLSKISDEELAERIDQIVTDRLKDIYCPIETKVSISQQVYSSIRGFGLLDSIISDDSI
TEVMINGPEKIFIEKKGRLTRLDKKFESQRKLEDVIQRIVGLAGREVNQANPICDTRLPDGSRVNVVLPPIALCGPTITI
RKFSKEPMTINKLIEYGSITQEIADKLELLVKAKYNIFISGGTGSGKTTFLNALSNFIPKDERIITIEDSAELQIAGIDN
LVSLETRNANASGAGQITIRDLIKSSLRMRPERIIVGECRGGEALDMLQAMNTGHDGSLSTGHANSTEDMLSRLETMVLQ
GADGLPIEAIKQQIASAVDIIIHLSRLRDKSRKTMAITEVVGIKNGEIELNPLYEFKEDENSTMDKVSGRLVRTGNPLKN
DYKLKLSGIKTAI
>Mature_413_residues
MYMQINEEELVDDIKRFVSENVSLSKISDEELAERIDQIVTDRLKDIYCPIETKVSISQQVYSSIRGFGLLDSIISDDSI
TEVMINGPEKIFIEKKGRLTRLDKKFESQRKLEDVIQRIVGLAGREVNQANPICDTRLPDGSRVNVVLPPIALCGPTITI
RKFSKEPMTINKLIEYGSITQEIADKLELLVKAKYNIFISGGTGSGKTTFLNALSNFIPKDERIITIEDSAELQIAGIDN
LVSLETRNANASGAGQITIRDLIKSSLRMRPERIIVGECRGGEALDMLQAMNTGHDGSLSTGHANSTEDMLSRLETMVLQ
GADGLPIEAIKQQIASAVDIIIHLSRLRDKSRKTMAITEVVGIKNGEIELNPLYEFKEDENSTMDKVSGRLVRTGNPLKN
DYKLKLSGIKTAI

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1786296, Length=138, Percent_Identity=36.231884057971, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 45796; Mature: 45796

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYMQINEEELVDDIKRFVSENVSLSKISDEELAERIDQIVTDRLKDIYCPIETKVSISQQ
CCEECCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
VYSSIRGFGLLDSIISDDSITEVMINGPEKIFIEKKGRLTRLDKKFESQRKLEDVIQRIV
HHHHHHCCHHHHHHHCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
GLAGREVNQANPICDTRLPDGSRVNVVLPPIALCGPTITIRKFSKEPMTINKLIEYGSIT
HHCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHCCEEEEEECCCCCCHHHHHHHHCCHH
QEIADKLELLVKAKYNIFISGGTGSGKTTFLNALSNFIPKDERIITIEDSAELQIAGIDN
HHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCC
LVSLETRNANASGAGQITIRDLIKSSLRMRPERIIVGECRGGEALDMLQAMNTGHDGSLS
EEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCC
TGHANSTEDMLSRLETMVLQGADGLPIEAIKQQIASAVDIIIHLSRLRDKSRKTMAITEV
CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHH
VGIKNGEIELNPLYEFKEDENSTMDKVSGRLVRTGNPLKNDYKLKLSGIKTAI
HCCCCCCEEECCCCCCCCCCCCHHHHHCCEEEECCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MYMQINEEELVDDIKRFVSENVSLSKISDEELAERIDQIVTDRLKDIYCPIETKVSISQQ
CCEECCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
VYSSIRGFGLLDSIISDDSITEVMINGPEKIFIEKKGRLTRLDKKFESQRKLEDVIQRIV
HHHHHHCCHHHHHHHCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
GLAGREVNQANPICDTRLPDGSRVNVVLPPIALCGPTITIRKFSKEPMTINKLIEYGSIT
HHCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHCCEEEEEECCCCCCHHHHHHHHCCHH
QEIADKLELLVKAKYNIFISGGTGSGKTTFLNALSNFIPKDERIITIEDSAELQIAGIDN
HHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCC
LVSLETRNANASGAGQITIRDLIKSSLRMRPERIIVGECRGGEALDMLQAMNTGHDGSLS
EEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCC
TGHANSTEDMLSRLETMVLQGADGLPIEAIKQQIASAVDIIIHLSRLRDKSRKTMAITEV
CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHH
VGIKNGEIELNPLYEFKEDENSTMDKVSGRLVRTGNPLKNDYKLKLSGIKTAI
HCCCCCCEEECCCCCCCCCCCCHHHHHCCEEEECCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]