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The map label for this gene is ipk [H]

Identifier: 238923379

GI number: 238923379

Start: 894538

End: 895419

Strand: Direct

Name: ipk [H]

Synonym: EUBREC_0999

Alternate gene names: 238923379

Gene position: 894538-895419 (Clockwise)

Preceding gene: 238923377

Following gene: 238923380

Centisome position: 25.93

GC content: 44.9

Gene sequence:

>882_bases
ATGGGTAGTAATAACGATATTTCATTAAAAGCATTAGCCAAGATTAATCTGGGGCTCGATGTTGTGAGGCGCAGAGAGGA
CGGATATCATGAGGTCCGTATGATTATGCAGACCATTCATCTGTATGACAGGCTTGATATCAAAAGGACAAAGGAGCCGG
GCATACAGATACAGACCAATCTGTCTTTTCTCCCTGTAAACGAGAACAATCTCATATACAAGGCTGCAAAGCTTCTGATG
GATGAGTTTTCTATAACTGACGGTGTATCAGTGAAGCTGGACAAGCGTATTCCTGTTGCAGCAGGGATGGCGGGGGGCAG
TACTGATGCGGCAGCTATGCTTATAGGTGTAAACAGGCTTTTTTCACTGGGACTGACAAAGAGACAGCTTATGGAAAGAG
GTGTGCAGATAGGTGCGGATGTACCATACTGTATTATGAGAGGCACGGCGCTGGCCGAGGGCATAGGAGAGGCGCTTAGT
CCTCTTCCTCCAATGGTAAAGTGTCCGGTGCTTATTGCAAAGCCGTCCATCTCGGTATCCACAAAATTTGTGTATCAGAA
TCTGAAGCTTGATGATACGACTATTCATCCGGATATAGACCACCTGATAGATGATATAAAGGCTAAGAATCTGCATGATA
TCGCAGCGCATATGGGAAATGTCTTAGAGACTGTGACCATACCAAATTATCCGGTGATAGATGAGATAAAGAAGCATATG
CTTTCAAATGGCGCGGTAGGAGCCATGATGAGCGGTAGTGGTCCGACGGTTTTTGGTCTGTTTGACGATGAAGATACTGC
AAAGAAAGCGTACAAAGCCATGAGAAGCTCACATCTTGCCAGACAGGTGTATCTGACATCTGTATACAATAATCGCAAAT
AA

Upstream 100 bases:

>100_bases
AAAGTAATGAAAATGAACAATTAAATGAGAATATTTAAATTTGCTCTTTTTGGCAGGGTGTGTTATAATCCTTGTATACA
AAAAACAGAGGTAATACAAT

Downstream 100 bases:

>100_bases
CGTGATATCCGGATAGCACAGCGGGTGCTTTATAGTTACTTTTTTCTTATATGTGAGAATGATAATACAAGAGATAGGAG
AAGTTTGATGACTGATAATT

Product: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase

Products: NA

Alternate protein names: CMK; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase [H]

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MGSNNDISLKALAKINLGLDVVRRREDGYHEVRMIMQTIHLYDRLDIKRTKEPGIQIQTNLSFLPVNENNLIYKAAKLLM
DEFSITDGVSVKLDKRIPVAAGMAGGSTDAAAMLIGVNRLFSLGLTKRQLMERGVQIGADVPYCIMRGTALAEGIGEALS
PLPPMVKCPVLIAKPSISVSTKFVYQNLKLDDTTIHPDIDHLIDDIKAKNLHDIAAHMGNVLETVTIPNYPVIDEIKKHM
LSNGAVGAMMSGSGPTVFGLFDDEDTAKKAYKAMRSSHLARQVYLTSVYNNRK

Sequences:

>Translated_293_residues
MGSNNDISLKALAKINLGLDVVRRREDGYHEVRMIMQTIHLYDRLDIKRTKEPGIQIQTNLSFLPVNENNLIYKAAKLLM
DEFSITDGVSVKLDKRIPVAAGMAGGSTDAAAMLIGVNRLFSLGLTKRQLMERGVQIGADVPYCIMRGTALAEGIGEALS
PLPPMVKCPVLIAKPSISVSTKFVYQNLKLDDTTIHPDIDHLIDDIKAKNLHDIAAHMGNVLETVTIPNYPVIDEIKKHM
LSNGAVGAMMSGSGPTVFGLFDDEDTAKKAYKAMRSSHLARQVYLTSVYNNRK
>Mature_292_residues
GSNNDISLKALAKINLGLDVVRRREDGYHEVRMIMQTIHLYDRLDIKRTKEPGIQIQTNLSFLPVNENNLIYKAAKLLMD
EFSITDGVSVKLDKRIPVAAGMAGGSTDAAAMLIGVNRLFSLGLTKRQLMERGVQIGADVPYCIMRGTALAEGIGEALSP
LPPMVKCPVLIAKPSISVSTKFVYQNLKLDDTTIHPDIDHLIDDIKAKNLHDIAAHMGNVLETVTIPNYPVIDEIKKHML
SNGAVGAMMSGSGPTVFGLFDDEDTAKKAYKAMRSSHLARQVYLTSVYNNRK

Specific function: Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol [H]

COG id: COG1947

COG function: function code I; 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GHMP kinase family. IspE subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787459, Length=263, Percent_Identity=30.0380228136882, Blast_Score=119, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006204
- InterPro:   IPR013750
- InterPro:   IPR004424
- InterPro:   IPR020568
- InterPro:   IPR014721 [H]

Pfam domain/function: PF08544 GHMP_kinases_C; PF00288 GHMP_kinases_N [H]

EC number: =2.7.1.148 [H]

Molecular weight: Translated: 32190; Mature: 32059

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSNNDISLKALAKINLGLDVVRRREDGYHEVRMIMQTIHLYDRLDIKRTKEPGIQIQTN
CCCCCCEEEEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC
LSFLPVNENNLIYKAAKLLMDEFSITDGVSVKLDKRIPVAAGMAGGSTDAAAMLIGVNRL
CEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHHH
FSLGLTKRQLMERGVQIGADVPYCIMRGTALAEGIGEALSPLPPMVKCPVLIAKPSISVS
HHHCCCHHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHHCCCCCHHHCCEEEECCCCCEE
TKFVYQNLKLDDTTIHPDIDHLIDDIKAKNLHDIAAHMGNVLETVTIPNYPVIDEIKKHM
EEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHH
LSNGAVGAMMSGSGPTVFGLFDDEDTAKKAYKAMRSSHLARQVYLTSVYNNRK
HCCCCCEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GSNNDISLKALAKINLGLDVVRRREDGYHEVRMIMQTIHLYDRLDIKRTKEPGIQIQTN
CCCCCEEEEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC
LSFLPVNENNLIYKAAKLLMDEFSITDGVSVKLDKRIPVAAGMAGGSTDAAAMLIGVNRL
CEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHHH
FSLGLTKRQLMERGVQIGADVPYCIMRGTALAEGIGEALSPLPPMVKCPVLIAKPSISVS
HHHCCCHHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHHCCCCCHHHCCEEEECCCCCEE
TKFVYQNLKLDDTTIHPDIDHLIDDIKAKNLHDIAAHMGNVLETVTIPNYPVIDEIKKHM
EEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHH
LSNGAVGAMMSGSGPTVFGLFDDEDTAKKAYKAMRSSHLARQVYLTSVYNNRK
HCCCCCEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA