Definition Eubacterium rectale ATCC 33656, complete genome.
Accession NC_012781
Length 3,449,685

Click here to switch to the map view.

The map label for this gene is 238923329

Identifier: 238923329

GI number: 238923329

Start: 847935

End: 849212

Strand: Direct

Name: 238923329

Synonym: EUBREC_0946

Alternate gene names: NA

Gene position: 847935-849212 (Clockwise)

Preceding gene: 238923328

Following gene: 238923330

Centisome position: 24.58

GC content: 41.31

Gene sequence:

>1278_bases
ATGACATGGGATAAGGTTATGAAGTTAAGAAACAGAATAAGAATATTTGCAGTTATATTTATACTGGCTTTGGGAATGGA
GTACTTACCGATGGCGGTATATGCTGCAGAAGTGACAGCGGAAGAAAGCGATATGGCAAATGATGCAGAACCGGATATGG
ATGAAACACCGGAACCGGACAATGCATCGGAAACGGACAAGGAAGACAAAACATACGTACAGGATACGGGACAGAATATA
CCGGTAACGGATATCGAGATATCAGATCATGAGGAGGAAGTGGAAGTAGGAAAGACAATAAACCTTACAGCCACAGCACT
TCCGGCGAATGCCACGGAAAGCACGATAACATTCCGTTCATCTGATATAAATATAGCAACTGTGACTTCAGCAGGTGAAG
TAAAGGGTATCTCAAAAGGATATGTTACCATATATGTATCTGCCGGAAGTATAATAAAAGAGGTAAATCTGACAGTAAAA
GTAAAAACAACCGGAATAAATATAAACAAAGAATATCTCGTAATGAAGCCGGGAACGGCATTTAAACTGAGCGTATCTGT
GTTTCCGGCAGAGGCAGAGCAGGCGGTTTCATACAAATCAACCAACACATCAGTTGCAGCAGTATCAGGCAGTGGTGTGG
TAACGGCAAAACAGACAGGTTCAGCTACAATAATAGTTTCAAATGGGGATTTGTCGGGCGCAGTGTCGGTAATCGTAAAC
AGAGATACGGAAAGTTCTGTGGCTGAACCGGCAGCAGATAGTACAGACGCAGAAAATACAAGTGAACAGACATTTGATGA
AAATATGGATGTATCCGAAACGCCTGTAATAAGTGAGCAGATGCTATATGAACTGTACACAGCAGGCAGATCAATGAAAG
TGACCGGAGACGGCTACAGCATCATAATAGACGGAAAGAAGATAGTAAATTATAAAAATGAACTTAATACGGATATAGAA
CTCGAAAGGACAGGAGACTGCATAAAATTCAATCTCAACGATGGAGAGTATCTGTGCGGAGAAGTGACACTGCACATAGA
TGATGTAAAAGGAAAATATCTGTATCTATATAATAACGTAAAGCATAAATACGAACTTGTGAGTACAAAAGACATGAGCG
GGCTTAATTTAAGCACACCTGGAAAGTATATGATCACGGCAAAGCCAATCAGAGAGGGCGGTACAGCGGTCAGATATATA
CTGATTGCAGGTGGAATCGGCATAATTGCAGGAATAGCTGTGTATGTGGCGGTAAAGAGAAGATACTGGTTCTGGTAA

Upstream 100 bases:

>100_bases
TAGACGTGACTAACGGCATGACGGCGGCTGCAAGAATACAGTATGATAAAGTCACATATTTTAACTATGTGCTTGAGAAA
CTCGGAATAAAAACCGGAAA

Downstream 100 bases:

>100_bases
AGGTGTATGTAATCATGATTTACATAAAGTCGTGTCCGGTTGCAAACAGACATGGCAGAAAAATAATGTTTAGAAGAGAA
CAGGAGGAAAACAAAATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MTWDKVMKLRNRIRIFAVIFILALGMEYLPMAVYAAEVTAEESDMANDAEPDMDETPEPDNASETDKEDKTYVQDTGQNI
PVTDIEISDHEEEVEVGKTINLTATALPANATESTITFRSSDINIATVTSAGEVKGISKGYVTIYVSAGSIIKEVNLTVK
VKTTGININKEYLVMKPGTAFKLSVSVFPAEAEQAVSYKSTNTSVAAVSGSGVVTAKQTGSATIIVSNGDLSGAVSVIVN
RDTESSVAEPAADSTDAENTSEQTFDENMDVSETPVISEQMLYELYTAGRSMKVTGDGYSIIIDGKKIVNYKNELNTDIE
LERTGDCIKFNLNDGEYLCGEVTLHIDDVKGKYLYLYNNVKHKYELVSTKDMSGLNLSTPGKYMITAKPIREGGTAVRYI
LIAGGIGIIAGIAVYVAVKRRYWFW

Sequences:

>Translated_425_residues
MTWDKVMKLRNRIRIFAVIFILALGMEYLPMAVYAAEVTAEESDMANDAEPDMDETPEPDNASETDKEDKTYVQDTGQNI
PVTDIEISDHEEEVEVGKTINLTATALPANATESTITFRSSDINIATVTSAGEVKGISKGYVTIYVSAGSIIKEVNLTVK
VKTTGININKEYLVMKPGTAFKLSVSVFPAEAEQAVSYKSTNTSVAAVSGSGVVTAKQTGSATIIVSNGDLSGAVSVIVN
RDTESSVAEPAADSTDAENTSEQTFDENMDVSETPVISEQMLYELYTAGRSMKVTGDGYSIIIDGKKIVNYKNELNTDIE
LERTGDCIKFNLNDGEYLCGEVTLHIDDVKGKYLYLYNNVKHKYELVSTKDMSGLNLSTPGKYMITAKPIREGGTAVRYI
LIAGGIGIIAGIAVYVAVKRRYWFW
>Mature_424_residues
TWDKVMKLRNRIRIFAVIFILALGMEYLPMAVYAAEVTAEESDMANDAEPDMDETPEPDNASETDKEDKTYVQDTGQNIP
VTDIEISDHEEEVEVGKTINLTATALPANATESTITFRSSDINIATVTSAGEVKGISKGYVTIYVSAGSIIKEVNLTVKV
KTTGININKEYLVMKPGTAFKLSVSVFPAEAEQAVSYKSTNTSVAAVSGSGVVTAKQTGSATIIVSNGDLSGAVSVIVNR
DTESSVAEPAADSTDAENTSEQTFDENMDVSETPVISEQMLYELYTAGRSMKVTGDGYSIIIDGKKIVNYKNELNTDIEL
ERTGDCIKFNLNDGEYLCGEVTLHIDDVKGKYLYLYNNVKHKYELVSTKDMSGLNLSTPGKYMITAKPIREGGTAVRYIL
IAGGIGIIAGIAVYVAVKRRYWFW

Specific function: Unknown

COG id: COG5492

COG function: function code N; Bacterial surface proteins containing Ig-like domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46229; Mature: 46097

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWDKVMKLRNRIRIFAVIFILALGMEYLPMAVYAAEVTAEESDMANDAEPDMDETPEPD
CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCC
NASETDKEDKTYVQDTGQNIPVTDIEISDHEEEVEVGKTINLTATALPANATESTITFRS
CCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCHHHCCCEEEEEEEECCCCCCCCEEEEEC
SDINIATVTSAGEVKGISKGYVTIYVSAGSIIKEVNLTVKVKTTGININKEYLVMKPGTA
CCCEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEEEEEEECCCCEEEECCCCE
FKLSVSVFPAEAEQAVSYKSTNTSVAAVSGSGVVTAKQTGSATIIVSNGDLSGAVSVIVN
EEEEEEEECCCHHHHEEECCCCCEEEEEECCCEEEEECCCCEEEEEECCCCCEEEEEEEE
RDTESSVAEPAADSTDAENTSEQTFDENMDVSETPVISEQMLYELYTAGRSMKVTGDGYS
CCCCHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCEE
IIIDGKKIVNYKNELNTDIELERTGDCIKFNLNDGEYLCGEVTLHIDDVKGKYLYLYNNV
EEECCHHEEEEHHHCCCCEEEEECCCEEEEECCCCCEEEEEEEEEEECCCCCEEEEECCC
KHKYELVSTKDMSGLNLSTPGKYMITAKPIREGGTAVRYILIAGGIGIIAGIAVYVAVKR
CEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHH
RYWFW
HCCCC
>Mature Secondary Structure 
TWDKVMKLRNRIRIFAVIFILALGMEYLPMAVYAAEVTAEESDMANDAEPDMDETPEPD
CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCC
NASETDKEDKTYVQDTGQNIPVTDIEISDHEEEVEVGKTINLTATALPANATESTITFRS
CCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCHHHCCCEEEEEEEECCCCCCCCEEEEEC
SDINIATVTSAGEVKGISKGYVTIYVSAGSIIKEVNLTVKVKTTGININKEYLVMKPGTA
CCCEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEEEEEEECCCCEEEECCCCE
FKLSVSVFPAEAEQAVSYKSTNTSVAAVSGSGVVTAKQTGSATIIVSNGDLSGAVSVIVN
EEEEEEEECCCHHHHEEECCCCCEEEEEECCCEEEEECCCCEEEEEECCCCCEEEEEEEE
RDTESSVAEPAADSTDAENTSEQTFDENMDVSETPVISEQMLYELYTAGRSMKVTGDGYS
CCCCHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCEE
IIIDGKKIVNYKNELNTDIELERTGDCIKFNLNDGEYLCGEVTLHIDDVKGKYLYLYNNV
EEECCHHEEEEHHHCCCCEEEEECCCEEEEECCCCCEEEEEEEEEEECCCCCEEEEECCC
KHKYELVSTKDMSGLNLSTPGKYMITAKPIREGGTAVRYILIAGGIGIIAGIAVYVAVKR
CEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHH
RYWFW
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA