| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238923256
Identifier: 238923256
GI number: 238923256
Start: 774578
End: 775000
Strand: Direct
Name: 238923256
Synonym: EUBREC_0867
Alternate gene names: NA
Gene position: 774578-775000 (Clockwise)
Preceding gene: 238923255
Following gene: 238923257
Centisome position: 22.45
GC content: 37.59
Gene sequence:
>423_bases ATGTGTTTAGCATACCAGAGTGGTAGTGAATCTGTAAGGTATTCACCAATCAATCCATGTAATGAAATCAGCCAAGAAGT AGCAGAATCTTTTAATGGTGCAACATTTACAAAAACAACATTGACAGAGGATACAGTTATGTATAGAGTAAGTGGTGGTA ATGCAGGAAAAGTTGGGTCATATGTATCAAGAACATCTCAAGGTGGAGGATTGCAATCACAGTTGGATTTGGCATTAAAT CCTTCTTGGGGAAATACAACTGAAAATATTACAAAAGTTGTTGTTCCAAAAGAAACCACGATTTATGAAGGTGTCGCTGC ACCACAGAACATTTATGACAGTCTTGGAAATACAATAGGTGTATTACCGGGAGGTGGGAATCAAGTATATATTCCAAAAG TGGAAGCGGGGTGGTTTAAATGA
Upstream 100 bases:
>100_bases TGCTTCAAGAGTGGTGACGCACACCTCTATCTATTACAGGATAATTGTGAAATAGGAATAAAAGAAAAGCAATAGATAGA AAAAGACTGCTTTGATTCCT
Downstream 100 bases:
>100_bases TAAAATGTGAATGTAGCGAACGAATAGGAAGTGTGATTAATTCGTACCAATTATATGAAGAAATTAAAATGTTTTTTGAA GAACAAGTTAAAGAAGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: RHS Repeat-Associated Core Domain Protein
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MCLAYQSGSESVRYSPINPCNEISQEVAESFNGATFTKTTLTEDTVMYRVSGGNAGKVGSYVSRTSQGGGLQSQLDLALN PSWGNTTENITKVVVPKETTIYEGVAAPQNIYDSLGNTIGVLPGGGNQVYIPKVEAGWFK
Sequences:
>Translated_140_residues MCLAYQSGSESVRYSPINPCNEISQEVAESFNGATFTKTTLTEDTVMYRVSGGNAGKVGSYVSRTSQGGGLQSQLDLALN PSWGNTTENITKVVVPKETTIYEGVAAPQNIYDSLGNTIGVLPGGGNQVYIPKVEAGWFK >Mature_140_residues MCLAYQSGSESVRYSPINPCNEISQEVAESFNGATFTKTTLTEDTVMYRVSGGNAGKVGSYVSRTSQGGGLQSQLDLALN PSWGNTTENITKVVVPKETTIYEGVAAPQNIYDSLGNTIGVLPGGGNQVYIPKVEAGWFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14877; Mature: 14877
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLAYQSGSESVRYSPINPCNEISQEVAESFNGATFTKTTLTEDTVMYRVSGGNAGKVGS CEEEECCCCCCEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCH YVSRTSQGGGLQSQLDLALNPSWGNTTENITKVVVPKETTIYEGVAAPQNIYDSLGNTIG HHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCEECCCCCCHHHHHHCCCEEE VLPGGGNQVYIPKVEAGWFK EEECCCCEEEEEECCCCCCC >Mature Secondary Structure MCLAYQSGSESVRYSPINPCNEISQEVAESFNGATFTKTTLTEDTVMYRVSGGNAGKVGS CEEEECCCCCCEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCH YVSRTSQGGGLQSQLDLALNPSWGNTTENITKVVVPKETTIYEGVAAPQNIYDSLGNTIG HHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCEECCCCCCHHHHHHCCCEEE VLPGGGNQVYIPKVEAGWFK EEECCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA