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The map label for this gene is cdaR [H]

Identifier: 238923120

GI number: 238923120

Start: 657554

End: 658639

Strand: Direct

Name: cdaR [H]

Synonym: EUBREC_0713

Alternate gene names: 238923120

Gene position: 657554-658639 (Clockwise)

Preceding gene: 238923119

Following gene: 238923121

Centisome position: 19.06

GC content: 40.33

Gene sequence:

>1086_bases
ATGATTTCCAATCAGATACTTCAAAATACAATTGATGGCCTTAAAGGAATTACGAGAACCGATCTTTGTGTGATAGATGT
TGAGGGCAAGATTCTTGCAGCTACGTTTCCGAACGCAGAGGCGTTTATAGAGCCGGCACAGGCCTTTGTTGCATCACCGG
CAGACAGTCAGGTGATTAATGGATGCCAGTTTTTCAAAGTCTTTGATGATCACCAGCTGGAATATGTGCTTTTAGCTTAT
GGTGACAGCGAGGATGTCTACATGATAGGCAAGATTGCAAGCTTCCAGATTCAGAATCTTCTGGTTGCGTACAAGGAGCG
ATTTGACAAGGATAATTTTATAAAGAATCTGCTTTTGGATAATCTCCTTCTGGTTGATATATACAATCGCGCGAAGAAGC
TTCATATTGATATTGAAGTGCGACGGGTAGTATTTATTGTTGAGACAAACAGGGAGAAGGACGGCAACGAGCTTGAGAAG
ATCAGAAGTCTTTTCGGCGGCAAATCAAAGGATTTTGTTACAGCTGTTGACGAGAAGAATATAATAGTAGTGAAGGAACT
GGCAGAAAACGAGACCTATGATGATCTCAGAAAGACAGCCGAGGTGATTTTGAATCTGTTCAGATCCGAAGCGGATGGGG
TACATATTGCATATGGTACTGTTATCAATGAGTTGAAAGAGGTGTCGCGCTCATATAAGGAGGCCAGGATGGCTCTCGAT
GTCGGAAAAATCTTTTTCGAGGAGAGGAATATTATAGCATATTCCCAGCTTGGAATAGGTCGTCTGATATATCAGCTCCC
GATTCCTCTATGCAAGATGTTTATCAAAGAGATATTTGATGGCAAATCCCCTGACGATTTTGATGAAGAAATATTATCTA
CTATAAATAAGTTCTTTGAGAATAGCCTGAATGTATCTGAGACTTCAAGACAGCTCTACATTCACAGAAATACTCTTGTA
TATAGATTGGACAAGCTTCAGAAAAGTACAGGGCTCGACCTTAGAGTGTTCGAGGATGCCATCACATTTAAGATTGCCCT
TATGGTAGTCAAATATATGAAATATATGGAATCAATGGACTATTAA

Upstream 100 bases:

>100_bases
GCGAATGTATTAAAATAATAGCAAGTATTTATGCAATTAGTTATAAAGTGACTGTGAGGGCAATGTACAGTTACAAAAAA
GGGGAGAAGGAGAACGATTT

Downstream 100 bases:

>100_bases
GGAGAAAGTAATGATTAAACTTGAACATGTCAGTAAGGCATATTCTGCAGGTATACCTGCTCTCAATGATGTCAATCTCG
AGATTGATGATGGAGAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Sugar diacid regulator [H]

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MISNQILQNTIDGLKGITRTDLCVIDVEGKILAATFPNAEAFIEPAQAFVASPADSQVINGCQFFKVFDDHQLEYVLLAY
GDSEDVYMIGKIASFQIQNLLVAYKERFDKDNFIKNLLLDNLLLVDIYNRAKKLHIDIEVRRVVFIVETNREKDGNELEK
IRSLFGGKSKDFVTAVDEKNIIVVKELAENETYDDLRKTAEVILNLFRSEADGVHIAYGTVINELKEVSRSYKEARMALD
VGKIFFEERNIIAYSQLGIGRLIYQLPIPLCKMFIKEIFDGKSPDDFDEEILSTINKFFENSLNVSETSRQLYIHRNTLV
YRLDKLQKSTGLDLRVFEDAITFKIALMVVKYMKYMESMDY

Sequences:

>Translated_361_residues
MISNQILQNTIDGLKGITRTDLCVIDVEGKILAATFPNAEAFIEPAQAFVASPADSQVINGCQFFKVFDDHQLEYVLLAY
GDSEDVYMIGKIASFQIQNLLVAYKERFDKDNFIKNLLLDNLLLVDIYNRAKKLHIDIEVRRVVFIVETNREKDGNELEK
IRSLFGGKSKDFVTAVDEKNIIVVKELAENETYDDLRKTAEVILNLFRSEADGVHIAYGTVINELKEVSRSYKEARMALD
VGKIFFEERNIIAYSQLGIGRLIYQLPIPLCKMFIKEIFDGKSPDDFDEEILSTINKFFENSLNVSETSRQLYIHRNTLV
YRLDKLQKSTGLDLRVFEDAITFKIALMVVKYMKYMESMDY
>Mature_361_residues
MISNQILQNTIDGLKGITRTDLCVIDVEGKILAATFPNAEAFIEPAQAFVASPADSQVINGCQFFKVFDDHQLEYVLLAY
GDSEDVYMIGKIASFQIQNLLVAYKERFDKDNFIKNLLLDNLLLVDIYNRAKKLHIDIEVRRVVFIVETNREKDGNELEK
IRSLFGGKSKDFVTAVDEKNIIVVKELAENETYDDLRKTAEVILNLFRSEADGVHIAYGTVINELKEVSRSYKEARMALD
VGKIFFEERNIIAYSQLGIGRLIYQLPIPLCKMFIKEIFDGKSPDDFDEEILSTINKFFENSLNVSETSRQLYIHRNTLV
YRLDKLQKSTGLDLRVFEDAITFKIALMVVKYMKYMESMDY

Specific function: Seems to regulate the expression of the operons for the enzymes involved in D-galactarate, D-glucarate and D-glycerate utilization [H]

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CdaR family [H]

Homologues:

Organism=Escherichia coli, GI87081694, Length=293, Percent_Identity=24.2320819112628, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008599 [H]

Pfam domain/function: PF05651 Diacid_rec [H]

EC number: NA

Molecular weight: Translated: 41508; Mature: 41508

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISNQILQNTIDGLKGITRTDLCVIDVEGKILAATFPNAEAFIEPAQAFVASPADSQVIN
CCCHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHC
GCQFFKVFDDHQLEYVLLAYGDSEDVYMIGKIASFQIQNLLVAYKERFDKDNFIKNLLLD
CCCEEEEECCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
NLLLVDIYNRAKKLHIDIEVRRVVFIVETNREKDGNELEKIRSLFGGKSKDFVTAVDEKN
HHHHHHHHHCCEEEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCC
IIVVKELAENETYDDLRKTAEVILNLFRSEADGVHIAYGTVINELKEVSRSYKEARMALD
EEEEEEHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
VGKIFFEERNIIAYSQLGIGRLIYQLPIPLCKMFIKEIFDGKSPDDFDEEILSTINKFFE
HHHHHHHCCCEEEEECCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
NSLNVSETSRQLYIHRNTLVYRLDKLQKSTGLDLRVFEDAITFKIALMVVKYMKYMESMD
CCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCC
Y
C
>Mature Secondary Structure
MISNQILQNTIDGLKGITRTDLCVIDVEGKILAATFPNAEAFIEPAQAFVASPADSQVIN
CCCHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHC
GCQFFKVFDDHQLEYVLLAYGDSEDVYMIGKIASFQIQNLLVAYKERFDKDNFIKNLLLD
CCCEEEEECCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
NLLLVDIYNRAKKLHIDIEVRRVVFIVETNREKDGNELEKIRSLFGGKSKDFVTAVDEKN
HHHHHHHHHCCEEEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCC
IIVVKELAENETYDDLRKTAEVILNLFRSEADGVHIAYGTVINELKEVSRSYKEARMALD
EEEEEEHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
VGKIFFEERNIIAYSQLGIGRLIYQLPIPLCKMFIKEIFDGKSPDDFDEEILSTINKFFE
HHHHHHHCCCEEEEECCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
NSLNVSETSRQLYIHRNTLVYRLDKLQKSTGLDLRVFEDAITFKIALMVVKYMKYMESMD
CCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503; 10762278 [H]