| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is spr [C]
Identifier: 238923117
GI number: 238923117
Start: 654927
End: 656162
Strand: Direct
Name: spr [C]
Synonym: EUBREC_0710
Alternate gene names: 238923117
Gene position: 654927-656162 (Clockwise)
Preceding gene: 238923116
Following gene: 238923118
Centisome position: 18.99
GC content: 44.66
Gene sequence:
>1236_bases ATGAAAGTAAATTATGTGAAACTCACAGCCGGGGTACTTACAGGTTTTATGGCTCTGTCCTCAGTGCCATATGCAGTATA TGCGGCTGGACCTACTGCAGGAGTAGCTAGTTATACATCAGATATTGTTAGTACATCAAACACTCTTACAGCCGGTGTTA CATCTATGTTGACAGATGTAATGTTAAAAGGTGATGAGACATCAGAGACTGCAACAGATGTTGCGACAACAGATGCTGAG CCGGTTAAATCAGCATATGCTGATACAGCAGTTGCACAGGTTAGCGACAGCGTTAATATACGTGCGAGTGCAGATGAAAA CAGCGAGTCTCTTGGAAAGCTCTATAACAATGGAATTGGAACAGTACTTGAGACAACCGATAACGGATGGTACAAAATCC AGTCCGGTTCAGTAACAGGATATGTAAAAGGTGATTATGTTGTAGTTGGTGACGATGCACTCGTACAGAGCGCAGGCCGT CGCGTGGCAACAGTCAATACTGAGACACTCAAGGTCAGAACAACAGCATCTACTGATGCAGAAGTACTTGGTCTCGTGTC CGGAGAGGATGATCTCACAGTTGTGGATGAGTCAACAGACGGATGGGTAGGTGTATCTACAGCAGACGGTACCGGATATG TATCTACAGATTATGTGACACTCGATACAGAGTTCACTTATGCTGAGTCTAAGGAAGAGGAAGCAGCAAGACTTGCCAAG GAAGAGGCAGAGCGTAAGGCGGCTGAGGAAGCAGCCAGAAAGGCTGAAGAGAAAGCTAGAAAGGCTGAGGAAGCAAAAGC AGCCAAGGCAGCAGCAAAGAAGTCATCTAAGTCTTCAAGCAAATCATCAAGCAGTTCTTCATCAGAGAAGAGCTATAGCG CACCAAGTGGTTCAAACGGACAGGCTGTTGTTAATTATGCATCACAGTTCGTTGGCAATCCTTATGTTTACGGTGGCTCA AGTCTTACAAACGGAACAGATTGTTCAGGATTTGTAATGTCAGTTTATGCACAGTTTGGCATCAGCTTACCACACAGCTC ATCAGCAATGAGAAGCGTTGGATACGGTGTGAGCACAAGCGATATGCAGCCTGGAGATATCATCTGCTATAGCGGACATG TTGCTATCTACTGTGGTGGAAACACTATTGTACATGCAAGCAACCCATCAGACGGTATCAAATATACATCACCGGCTAAC TACAAATCAATCATTGCAGTTAGAAGAATTTTCTAA
Upstream 100 bases:
>100_bases AGAAAACGTTGACATATATATGTTGCTTTGTTATAATGACAAAGTAATATTTGTAACAAATTCGTAATAACTGTTACAAA TTCATACAACGGAGGGTAAA
Downstream 100 bases:
>100_bases TAAATTCATGCCGGATAGGTAAATATGAATCTATAAAGACCTTCATCTCATCGAGATGGAGGTCTTTTTTACATAGAGAA ATTTTATTTTTGTTTATGAT
Product: NLP/P60 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MKVNYVKLTAGVLTGFMALSSVPYAVYAAGPTAGVASYTSDIVSTSNTLTAGVTSMLTDVMLKGDETSETATDVATTDAE PVKSAYADTAVAQVSDSVNIRASADENSESLGKLYNNGIGTVLETTDNGWYKIQSGSVTGYVKGDYVVVGDDALVQSAGR RVATVNTETLKVRTTASTDAEVLGLVSGEDDLTVVDESTDGWVGVSTADGTGYVSTDYVTLDTEFTYAESKEEEAARLAK EEAERKAAEEAARKAEEKARKAEEAKAAKAAAKKSSKSSSKSSSSSSSEKSYSAPSGSNGQAVVNYASQFVGNPYVYGGS SLTNGTDCSGFVMSVYAQFGISLPHSSSAMRSVGYGVSTSDMQPGDIICYSGHVAIYCGGNTIVHASNPSDGIKYTSPAN YKSIIAVRRIF
Sequences:
>Translated_411_residues MKVNYVKLTAGVLTGFMALSSVPYAVYAAGPTAGVASYTSDIVSTSNTLTAGVTSMLTDVMLKGDETSETATDVATTDAE PVKSAYADTAVAQVSDSVNIRASADENSESLGKLYNNGIGTVLETTDNGWYKIQSGSVTGYVKGDYVVVGDDALVQSAGR RVATVNTETLKVRTTASTDAEVLGLVSGEDDLTVVDESTDGWVGVSTADGTGYVSTDYVTLDTEFTYAESKEEEAARLAK EEAERKAAEEAARKAEEKARKAEEAKAAKAAAKKSSKSSSKSSSSSSSEKSYSAPSGSNGQAVVNYASQFVGNPYVYGGS SLTNGTDCSGFVMSVYAQFGISLPHSSSAMRSVGYGVSTSDMQPGDIICYSGHVAIYCGGNTIVHASNPSDGIKYTSPAN YKSIIAVRRIF >Mature_411_residues MKVNYVKLTAGVLTGFMALSSVPYAVYAAGPTAGVASYTSDIVSTSNTLTAGVTSMLTDVMLKGDETSETATDVATTDAE PVKSAYADTAVAQVSDSVNIRASADENSESLGKLYNNGIGTVLETTDNGWYKIQSGSVTGYVKGDYVVVGDDALVQSAGR RVATVNTETLKVRTTASTDAEVLGLVSGEDDLTVVDESTDGWVGVSTADGTGYVSTDYVTLDTEFTYAESKEEEAARLAK EEAERKAAEEAARKAEEKARKAEEAKAAKAAAKKSSKSSSKSSSSSSSEKSYSAPSGSNGQAVVNYASQFVGNPYVYGGS SLTNGTDCSGFVMSVYAQFGISLPHSSSAMRSVGYGVSTSDMQPGDIICYSGHVAIYCGGNTIVHASNPSDGIKYTSPAN YKSIIAVRRIF
Specific function: Unknown
COG id: COG0791
COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)
Gene ontology:
Cell location: Attached To The Membrane By A Lipid Anchor [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788501, Length=94, Percent_Identity=37.2340425531915, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000064 [H]
Pfam domain/function: PF00877 NLPC_P60 [H]
EC number: NA
Molecular weight: Translated: 42738; Mature: 42738
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVNYVKLTAGVLTGFMALSSVPYAVYAAGPTAGVASYTSDIVSTSNTLTAGVTSMLTDV CCEEEEEHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH MLKGDETSETATDVATTDAEPVKSAYADTAVAQVSDSVNIRASADENSESLGKLYNNGIG HCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCC TVLETTDNGWYKIQSGSVTGYVKGDYVVVGDDALVQSAGRRVATVNTETLKVRTTASTDA EEEEECCCCEEEEECCCEEEEEECCEEEECCHHHHHHCCCEEEEECCCEEEEEEECCCCC EVLGLVSGEDDLTVVDESTDGWVGVSTADGTGYVSTDYVTLDTEFTYAESKEEEAARLAK EEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEECEEEECCEEEECCCCHHHHHHHHH EEAERKAAEEAARKAEEKARKAEEAKAAKAAAKKSSKSSSKSSSSSSSEKSYSAPSGSNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC QAVVNYASQFVGNPYVYGGSSLTNGTDCSGFVMSVYAQFGISLPHSSSAMRSVGYGVSTS CCHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCC DMQPGDIICYSGHVAIYCGGNTIVHASNPSDGIKYTSPANYKSIIAVRRIF CCCCCCEEEECCCEEEEECCCEEEECCCCCCCCEECCCCCHHHHHHHHHCC >Mature Secondary Structure MKVNYVKLTAGVLTGFMALSSVPYAVYAAGPTAGVASYTSDIVSTSNTLTAGVTSMLTDV CCEEEEEHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH MLKGDETSETATDVATTDAEPVKSAYADTAVAQVSDSVNIRASADENSESLGKLYNNGIG HCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCC TVLETTDNGWYKIQSGSVTGYVKGDYVVVGDDALVQSAGRRVATVNTETLKVRTTASTDA EEEEECCCCEEEEECCCEEEEEECCEEEECCHHHHHHCCCEEEEECCCEEEEEEECCCCC EVLGLVSGEDDLTVVDESTDGWVGVSTADGTGYVSTDYVTLDTEFTYAESKEEEAARLAK EEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEECEEEECCEEEECCCCHHHHHHHHH EEAERKAAEEAARKAEEKARKAEEAKAAKAAAKKSSKSSSKSSSSSSSEKSYSAPSGSNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC QAVVNYASQFVGNPYVYGGSSLTNGTDCSGFVMSVYAQFGISLPHSSSAMRSVGYGVSTS CCHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCC DMQPGDIICYSGHVAIYCGGNTIVHASNPSDGIKYTSPANYKSIIAVRRIF CCCCCCEEEECCCEEEEECCCEEEECCCCCCCCEECCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]