| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238923085
Identifier: 238923085
GI number: 238923085
Start: 618799
End: 621327
Strand: Direct
Name: 238923085
Synonym: EUBREC_0675
Alternate gene names: NA
Gene position: 618799-621327 (Clockwise)
Preceding gene: 238923084
Following gene: 238923086
Centisome position: 17.94
GC content: 42.31
Gene sequence:
>2529_bases ATGAGTAAGAAAGTGATAAAGCCGATAGTACTTATAGTAGTATTTATTGCAGCATTAATTACATTTTGCATAACTACAAA CAAGGGAAATAAGGATATGACCACGAAGCAGGCGGATGCAACGCTGCCGGTTATGTCATTTAATCTGGATAAAATAAAGA TAAACACCCTCCATGGATATACTACTGAGATGGATCCGACAAAGATGCGCGATTGCGTTATTCCGATTTCGGATGACAGG AAGCTCTCATTATCCATTTCAACATATGGCATGGCTGTTGACAGAATATCATATAAGATCAGAAGCATGGATGGCAAGAG GCTGGTGGCCGATGACGAGATATCTTCTTTTTCTAATAAGGATAATACTATTCAGGCGGACGTAAACATGCCGAATGTTA TGGATGAAAATACTGAGTATCTTTTGGTGTTTACCATCACAAGCGGTCAGGATAATGTATATTATTACAGCAGGATTATG CAGACCGATGGAAAGGCAGCTGCAAAGGTTGTTGAGTTTGCAAAGAAGTTTCATGATGAGACGTTTATAAAGGATGACAA ATCATTCTTTACAACATATATGGAGACAACAACCGGTGACAGAAATACGCTTGCACATGTGGATCTGACATCTACGGTGA GTCAGATTACCTGGGGCTCAATGGCCGCTGCACAGTATACGAATCCTGTCATAGCCCTAAAGGAAATAAACGATTCTTAT GATGTGGTTACAATAGACTATGTGATGAGCTGTGTGGACGGTAAGGGTGAGACTGAGTATTACAATGTGAGAGAATATTT CAGGCTGCGCCAGACGGAAAGCCGTATGTACGTGCTCAACTATGAGAGAACGGCAAATCAGATTTTTAACAGTGAAAACA GCTTTATATCGGATTCAGGCAGCGTAATGCTTGGCATCAGAAGCAGTGAGGCAGAGTACAGGGCCAATGAAGCAGGCAGT GTGATATGCTTTGTCCAGGAGGGAGATTTATACTCCTATGATATCAACAATGGAATGATAATCAAGGTATTCAGCTTCAG GGACGCTGAGGGCATTGATGAGCGTGAGAACTGGAATCATCACGATATAAAAATTGTCAGTGTAGACGAAGCGGGCAGTA TTGATTTTGTGGTATACGGATATATGAACAGAGGCACCCACGAGGGAGAGGTGGGAACCGGTGTGTACCATTATGACGGT CTGGCACATACTATAGATGAGGAAGCGTTTATTCCTTCTAAGACATCATATGAGGTGCTAAAGGCTGAGATGGGCAAGAT GCTTTATCTCAATGAGAAGAATGAATTCTATCTCATGATGGATGACAGTCTCTATAGGATTAATTTAGGCTCGATGTCAG TAAAGAAGGTGGTTGAGGGCTTGTCTACAGGCTCTTACTGCGCATCGGAGAGTAACAGATACTTTGCATGGGTGGATTCT GCAAATCAGTACTCATCAAATACCATAAAAGTGATGGATTTAAAGAGTGGTAAGACCTTTGAGGTCAAAAAGGGCGACGA CCAGTATCTGCGTCCGCTTGGCTTCATAGGTGAGGATTTCATATATGGACAGGCGAATGCTGCTGATGTGGTCTCTGATG CAGCCGGAAACACGACATTTCCGATGAATGGCCTTATTATTCTTGATACATCTGACCAGTCGGAGCTTAAGACATATACC CCTTCGGGCGGCTATGTCGAGAAAATTTCTGTGGATGGATATACGGTAACGATAGATCTGATTGCACAAAACAATGGTGT GTATGCAGAAATCGGTCAGGATACCATTATGAACCGGGAGGCTGATTCGAAGCAGAAGATAGCTCTTGATACGAGCCAGT CCGATACAAAGCTGACGGTCAGCGCTATTAGTATAGCAGGTGGTAAAAAGCCGGATAAGCTGAAGCAGCTGACAGCACAG ATGACTATAAATTCGCATGATACTGCTGTTGATTTAAAGTTTGATGACAATACAGTCCATTTCTATGTTTATGCAAAGGG GGATGTGATTTTTGCATCTGATAACATCTCGGATGCCATAAAACAGGCAAATGACAGCATGGGAGTGGTAATTGACTCAA ACCAGCAGTATGTATGGATGAGGGCAAGAAAAAATGCAGTAAATGCATTTGCGAATATTGCATGTAATGAAATCGATAAG GATGCTGACAGTGTCGTGAAGTCAGTAAGTGCAATGCTTACCTACAATGATGTTACGGTAAGTGTGTCTGAGCTGATTGG AGCAGGCAGCAGTGCTGTTGATGTGCTCAAAAACAACCTGCCGGACAAGGAAATCCTGGATTTACAGGGAGTGTCTTCTG AGGATATTATCTTTTATATCAGCCAGGGCAATCCGGTATTTGCGATGACGGGAAATACGTCGGCAGTGCTTGTGACAGGA TACTCTTCAAATGGAGCTTTATATATTTATAATCCGGATAATGGCGCAACAACATCGATGAGCTATGAGGATGCTGACAG AATGTTTTATAATGGTGGCTTGCATTTTATCACGTACATGACAAAATAA
Upstream 100 bases:
>100_bases CTGTACAATAGCGGGCATACTTTTTAACTGTGAACTCTGCAGACGCAGATGCAGATACAGAAGGTACCAAAGATTCTGGT AGATATAAGGATATGATTTT
Downstream 100 bases:
>100_bases ACAGAATAATGTTGTAATAATGCCGATTTTGTGACATTAAATGTAAGCTCCTTAGGTAAAGTTTAACAGAAATTTTCATA AGGATTGAAAAGCGGTTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 842; Mature: 841
Protein sequence:
>842_residues MSKKVIKPIVLIVVFIAALITFCITTNKGNKDMTTKQADATLPVMSFNLDKIKINTLHGYTTEMDPTKMRDCVIPISDDR KLSLSISTYGMAVDRISYKIRSMDGKRLVADDEISSFSNKDNTIQADVNMPNVMDENTEYLLVFTITSGQDNVYYYSRIM QTDGKAAAKVVEFAKKFHDETFIKDDKSFFTTYMETTTGDRNTLAHVDLTSTVSQITWGSMAAAQYTNPVIALKEINDSY DVVTIDYVMSCVDGKGETEYYNVREYFRLRQTESRMYVLNYERTANQIFNSENSFISDSGSVMLGIRSSEAEYRANEAGS VICFVQEGDLYSYDINNGMIIKVFSFRDAEGIDERENWNHHDIKIVSVDEAGSIDFVVYGYMNRGTHEGEVGTGVYHYDG LAHTIDEEAFIPSKTSYEVLKAEMGKMLYLNEKNEFYLMMDDSLYRINLGSMSVKKVVEGLSTGSYCASESNRYFAWVDS ANQYSSNTIKVMDLKSGKTFEVKKGDDQYLRPLGFIGEDFIYGQANAADVVSDAAGNTTFPMNGLIILDTSDQSELKTYT PSGGYVEKISVDGYTVTIDLIAQNNGVYAEIGQDTIMNREADSKQKIALDTSQSDTKLTVSAISIAGGKKPDKLKQLTAQ MTINSHDTAVDLKFDDNTVHFYVYAKGDVIFASDNISDAIKQANDSMGVVIDSNQQYVWMRARKNAVNAFANIACNEIDK DADSVVKSVSAMLTYNDVTVSVSELIGAGSSAVDVLKNNLPDKEILDLQGVSSEDIIFYISQGNPVFAMTGNTSAVLVTG YSSNGALYIYNPDNGATTSMSYEDADRMFYNGGLHFITYMTK
Sequences:
>Translated_842_residues MSKKVIKPIVLIVVFIAALITFCITTNKGNKDMTTKQADATLPVMSFNLDKIKINTLHGYTTEMDPTKMRDCVIPISDDR KLSLSISTYGMAVDRISYKIRSMDGKRLVADDEISSFSNKDNTIQADVNMPNVMDENTEYLLVFTITSGQDNVYYYSRIM QTDGKAAAKVVEFAKKFHDETFIKDDKSFFTTYMETTTGDRNTLAHVDLTSTVSQITWGSMAAAQYTNPVIALKEINDSY DVVTIDYVMSCVDGKGETEYYNVREYFRLRQTESRMYVLNYERTANQIFNSENSFISDSGSVMLGIRSSEAEYRANEAGS VICFVQEGDLYSYDINNGMIIKVFSFRDAEGIDERENWNHHDIKIVSVDEAGSIDFVVYGYMNRGTHEGEVGTGVYHYDG LAHTIDEEAFIPSKTSYEVLKAEMGKMLYLNEKNEFYLMMDDSLYRINLGSMSVKKVVEGLSTGSYCASESNRYFAWVDS ANQYSSNTIKVMDLKSGKTFEVKKGDDQYLRPLGFIGEDFIYGQANAADVVSDAAGNTTFPMNGLIILDTSDQSELKTYT PSGGYVEKISVDGYTVTIDLIAQNNGVYAEIGQDTIMNREADSKQKIALDTSQSDTKLTVSAISIAGGKKPDKLKQLTAQ MTINSHDTAVDLKFDDNTVHFYVYAKGDVIFASDNISDAIKQANDSMGVVIDSNQQYVWMRARKNAVNAFANIACNEIDK DADSVVKSVSAMLTYNDVTVSVSELIGAGSSAVDVLKNNLPDKEILDLQGVSSEDIIFYISQGNPVFAMTGNTSAVLVTG YSSNGALYIYNPDNGATTSMSYEDADRMFYNGGLHFITYMTK >Mature_841_residues SKKVIKPIVLIVVFIAALITFCITTNKGNKDMTTKQADATLPVMSFNLDKIKINTLHGYTTEMDPTKMRDCVIPISDDRK LSLSISTYGMAVDRISYKIRSMDGKRLVADDEISSFSNKDNTIQADVNMPNVMDENTEYLLVFTITSGQDNVYYYSRIMQ TDGKAAAKVVEFAKKFHDETFIKDDKSFFTTYMETTTGDRNTLAHVDLTSTVSQITWGSMAAAQYTNPVIALKEINDSYD VVTIDYVMSCVDGKGETEYYNVREYFRLRQTESRMYVLNYERTANQIFNSENSFISDSGSVMLGIRSSEAEYRANEAGSV ICFVQEGDLYSYDINNGMIIKVFSFRDAEGIDERENWNHHDIKIVSVDEAGSIDFVVYGYMNRGTHEGEVGTGVYHYDGL AHTIDEEAFIPSKTSYEVLKAEMGKMLYLNEKNEFYLMMDDSLYRINLGSMSVKKVVEGLSTGSYCASESNRYFAWVDSA NQYSSNTIKVMDLKSGKTFEVKKGDDQYLRPLGFIGEDFIYGQANAADVVSDAAGNTTFPMNGLIILDTSDQSELKTYTP SGGYVEKISVDGYTVTIDLIAQNNGVYAEIGQDTIMNREADSKQKIALDTSQSDTKLTVSAISIAGGKKPDKLKQLTAQM TINSHDTAVDLKFDDNTVHFYVYAKGDVIFASDNISDAIKQANDSMGVVIDSNQQYVWMRARKNAVNAFANIACNEIDKD ADSVVKSVSAMLTYNDVTVSVSELIGAGSSAVDVLKNNLPDKEILDLQGVSSEDIIFYISQGNPVFAMTGNTSAVLVTGY SSNGALYIYNPDNGATTSMSYEDADRMFYNGGLHFITYMTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 93556; Mature: 93425
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKVIKPIVLIVVFIAALITFCITTNKGNKDMTTKQADATLPVMSFNLDKIKINTLHGY CCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEECE TTEMDPTKMRDCVIPISDDRKLSLSISTYGMAVDRISYKIRSMDGKRLVADDEISSFSNK ECCCCCCHHCEEEEECCCCCEEEEEEEECCEEEEHHEEEEECCCCCEEEECCCHHHCCCC DNTIQADVNMPNVMDENTEYLLVFTITSGQDNVYYYSRIMQTDGKAAAKVVEFAKKFHDE CCEEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCC TFIKDDKSFFTTYMETTTGDRNTLAHVDLTSTVSQITWGSMAAAQYTNPVIALKEINDSY CEECCCHHHEEEEEEECCCCCCEEEEEEHHHHHHHHCCCCEEHHHHCCCEEEEEECCCCC DVVTIDYVMSCVDGKGETEYYNVREYFRLRQTESRMYVLNYERTANQIFNSENSFISDSG CEEEHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCEEEEEEECHHHHHHHCCCCCEECCCC SVMLGIRSSEAEYRANEAGSVICFVQEGDLYSYDINNGMIIKVFSFRDAEGIDERENWNH CEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCC HDIKIVSVDEAGSIDFVVYGYMNRGTHEGEVGTGVYHYDGLAHTIDEEAFIPSKTSYEVL CEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHH KAEMGKMLYLNEKNEFYLMMDDSLYRINLGSMSVKKVVEGLSTGSYCASESNRYFAWVDS HHHCCCEEEEECCCCEEEEECCCEEEEEECCCHHHHHHHHCCCCCEECCCCCCEEEEEEC ANQYSSNTIKVMDLKSGKTFEVKKGDDQYLRPLGFIGEDFIYGQANAADVVSDAAGNTTF CCCCCCCEEEEEEECCCCEEEEECCCHHHHHHHCCCCCCEEECCCCHHHHHHCCCCCCCC PMNGLIILDTSDQSELKTYTPSGGYVEKISVDGYTVTIDLIAQNNGVYAEIGQDTIMNRE CCCCEEEEECCCCCCCEEECCCCCEEEEEEECCEEEEEEEEECCCCEEEECCCCHHCCCC ADSKQKIALDTSQSDTKLTVSAISIAGGKKPDKLKQLTAQMTINSHDTAVDLKFDDNTVH CCCCCEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHEEEEEECCCCCEEEEEECCCEEE FYVYAKGDVIFASDNISDAIKQANDSMGVVIDSNQQYVWMRARKNAVNAFANIACNEIDK EEEEEECCEEEECCCHHHHHHHCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHCCC DADSVVKSVSAMLTYNDVTVSVSELIGAGSSAVDVLKNNLPDKEILDLQGVSSEDIIFYI CHHHHHHHHHHEEEECCEEEEHHHHHCCCCHHHHHHHCCCCCCCEEEECCCCCCCEEEEE SQGNPVFAMTGNTSAVLVTGYSSNGALYIYNPDNGATTSMSYEDADRMFYNGGLHFITYM ECCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCCEEECCCCCCCCEEECCCEEEEEEE TK EC >Mature Secondary Structure SKKVIKPIVLIVVFIAALITFCITTNKGNKDMTTKQADATLPVMSFNLDKIKINTLHGY CCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEECE TTEMDPTKMRDCVIPISDDRKLSLSISTYGMAVDRISYKIRSMDGKRLVADDEISSFSNK ECCCCCCHHCEEEEECCCCCEEEEEEEECCEEEEHHEEEEECCCCCEEEECCCHHHCCCC DNTIQADVNMPNVMDENTEYLLVFTITSGQDNVYYYSRIMQTDGKAAAKVVEFAKKFHDE CCEEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCC TFIKDDKSFFTTYMETTTGDRNTLAHVDLTSTVSQITWGSMAAAQYTNPVIALKEINDSY CEECCCHHHEEEEEEECCCCCCEEEEEEHHHHHHHHCCCCEEHHHHCCCEEEEEECCCCC DVVTIDYVMSCVDGKGETEYYNVREYFRLRQTESRMYVLNYERTANQIFNSENSFISDSG CEEEHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCEEEEEEECHHHHHHHCCCCCEECCCC SVMLGIRSSEAEYRANEAGSVICFVQEGDLYSYDINNGMIIKVFSFRDAEGIDERENWNH CEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCC HDIKIVSVDEAGSIDFVVYGYMNRGTHEGEVGTGVYHYDGLAHTIDEEAFIPSKTSYEVL CEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHH KAEMGKMLYLNEKNEFYLMMDDSLYRINLGSMSVKKVVEGLSTGSYCASESNRYFAWVDS HHHCCCEEEEECCCCEEEEECCCEEEEEECCCHHHHHHHHCCCCCEECCCCCCEEEEEEC ANQYSSNTIKVMDLKSGKTFEVKKGDDQYLRPLGFIGEDFIYGQANAADVVSDAAGNTTF CCCCCCCEEEEEEECCCCEEEEECCCHHHHHHHCCCCCCEEECCCCHHHHHHCCCCCCCC PMNGLIILDTSDQSELKTYTPSGGYVEKISVDGYTVTIDLIAQNNGVYAEIGQDTIMNRE CCCCEEEEECCCCCCCEEECCCCCEEEEEEECCEEEEEEEEECCCCEEEECCCCHHCCCC ADSKQKIALDTSQSDTKLTVSAISIAGGKKPDKLKQLTAQMTINSHDTAVDLKFDDNTVH CCCCCEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHEEEEEECCCCCEEEEEECCCEEE FYVYAKGDVIFASDNISDAIKQANDSMGVVIDSNQQYVWMRARKNAVNAFANIACNEIDK EEEEEECCEEEECCCHHHHHHHCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHCCC DADSVVKSVSAMLTYNDVTVSVSELIGAGSSAVDVLKNNLPDKEILDLQGVSSEDIIFYI CHHHHHHHHHHEEEECCEEEEHHHHHCCCCHHHHHHHCCCCCCCEEEECCCCCCCEEEEE SQGNPVFAMTGNTSAVLVTGYSSNGALYIYNPDNGATTSMSYEDADRMFYNGGLHFITYM ECCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCCEEECCCCCCCCEEECCCEEEEEEE TK EC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA