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The map label for this gene is xylB [H]

Identifier: 238923078

GI number: 238923078

Start: 611345

End: 612943

Strand: Direct

Name: xylB [H]

Synonym: EUBREC_0668

Alternate gene names: 238923078

Gene position: 611345-612943 (Clockwise)

Preceding gene: 238923076

Following gene: 238923079

Centisome position: 17.72

GC content: 47.34

Gene sequence:

>1599_bases
ATGTCAGACGTAAAAAGTGTTATTGAAAGCGGCAGGGCTGTGCTCGGAATAGAGTTCGGTTCTACCAGAATAAAGGCGGT
GCTTATCGGGGAGGATCATGCTCCTATAGCCACAGGTGCCCATGATTGGGAAAACATGCTTGTGGACGGCATCTGGACAT
ACAGCCTGGATATGATTTGGGAGGGCATTTCAGACTGCTACAGCAAAATGGCGCAGGATGCAAAGGAAAAGTATGGTGTT
ACCATAAAAAAGCTTGCGGCAATCGGTATTTCCGGCATGATGCACGGCTATCTGCCTTTTGACGAGGAGGATAATCTGCT
TGTGCCATTTCGGACATGGAGAAATACCATCACAGGTGAGGCTGCAGCAGAGCTTACGGAGGTGCTTGGCTTTAATATTC
CGCAGAGGTGGAGCATAGCGCATCTGTATCAGGCTATATTAAATAAAGAAGAGCATGTATCAAAGATATCATATTTCACA
ACATTGGCAGGCTATATTCACTGGCAGCTCACAGGTGAAAAGGTCATGGGTGTAGGTGAGGCATCAGGCATGTTTCCTAT
CGATTCGAAGACCAGGGATTATGATGCGGCAATGCTTGATAAATTTGCAGCATTAGATAAGGTAAAAGAATATCCGTGGG
ATATAAGAGACATTCTGCCAAAGGTGCTTACGGCTGGAGAAAAGGCAGGTACGCTGACAGAGGAAGGAGCTAAAAGGCTT
GATGTAAGCGGCAATCTGGAGAGCGGTATATTGCTTGCACCGCCTGAGGGAGACGCAGGCACGGGAATGGTCGCAACCAA
TTCTGTTGCAGTGCGTACCGGAAATGTATCAGCGGGCACATCTGTATTTGCTATGGTGGTGCTTGAAAAGGCACTTAAGG
CAGTTCATGAGGAGCTTGATATGGTCACCACACCATCGGGAGATGCGGTAGCTATGGTGCACTGCAACAACTGTACGTCA
GACTTAAATGCATGGGTGGGATTATTCAAGGAATTTTCAGAGCTGTTTGGCATGGATATAGATATGAATGACATATATGG
AAAGCTCTACAACAATGCACTTACAGCCGATAAGGACTGTGGCGGCCTTGTGGCCTTTAACCTTTTCTCGGGAGAGCCTG
TCATCGGACTCAATGAGGGCAGACCTATGTTTGCCAGAAAGCCGGATGCAAGGATGAATCTTGCAAACTTTATGCGCACA
CATCTCTATGCAAGTCTTGCAACACTAAAAATCGGCTGTGATATTCTATTTAAAGAGGAAAAAGTAAAGGTAGACACACT
TTACGGTCATGGTGGTCTGTTCAAGACAAAGGGTGTGGGCCAGAGCATACTTGCAGCAGCCATGGATGCACCGGTTGCGG
TAATGGAGACTGCCGGAGAGGGCGGCCCGTGGGGCATGGCAGTGCTCGCAGCTTATATGGTGAATAAAGCAGATGGAGAG
CCTTTGGAAAAATATCTTTCAGACAGGGTATTTAATGGCGAAAAGGGCATAGTAATGCAGCCGGACCCTGATGATGTAAA
GGGCTTTGATGAGTACATAAATACATATAAGGCGGCAATTGAGGCAGAGCGTGCCATGGTAAAGGCGCTCCCGCTGTAA

Upstream 100 bases:

>100_bases
GTTTTCTTGTGTTTACTTTTGAAGGAAAACGTTGTACAATTACAGTATAATAATTTAAGGTAATTATTCAGAAATTTACA
TTACAAGGTGGAGGTATATT

Downstream 100 bases:

>100_bases
TAGCAGTAAAAAATAATAAGAGAGGAACAAAAAATGCTTGAAGAATTAAAGAAACAGGTTTACGAAGCAAACATGGAGCT
CCCAAGAAGAGGGCTTATCA

Product: L-ribulokinase (putative)

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 532; Mature: 531

Protein sequence:

>532_residues
MSDVKSVIESGRAVLGIEFGSTRIKAVLIGEDHAPIATGAHDWENMLVDGIWTYSLDMIWEGISDCYSKMAQDAKEKYGV
TIKKLAAIGISGMMHGYLPFDEEDNLLVPFRTWRNTITGEAAAELTEVLGFNIPQRWSIAHLYQAILNKEEHVSKISYFT
TLAGYIHWQLTGEKVMGVGEASGMFPIDSKTRDYDAAMLDKFAALDKVKEYPWDIRDILPKVLTAGEKAGTLTEEGAKRL
DVSGNLESGILLAPPEGDAGTGMVATNSVAVRTGNVSAGTSVFAMVVLEKALKAVHEELDMVTTPSGDAVAMVHCNNCTS
DLNAWVGLFKEFSELFGMDIDMNDIYGKLYNNALTADKDCGGLVAFNLFSGEPVIGLNEGRPMFARKPDARMNLANFMRT
HLYASLATLKIGCDILFKEEKVKVDTLYGHGGLFKTKGVGQSILAAAMDAPVAVMETAGEGGPWGMAVLAAYMVNKADGE
PLEKYLSDRVFNGEKGIVMQPDPDDVKGFDEYINTYKAAIEAERAMVKALPL

Sequences:

>Translated_532_residues
MSDVKSVIESGRAVLGIEFGSTRIKAVLIGEDHAPIATGAHDWENMLVDGIWTYSLDMIWEGISDCYSKMAQDAKEKYGV
TIKKLAAIGISGMMHGYLPFDEEDNLLVPFRTWRNTITGEAAAELTEVLGFNIPQRWSIAHLYQAILNKEEHVSKISYFT
TLAGYIHWQLTGEKVMGVGEASGMFPIDSKTRDYDAAMLDKFAALDKVKEYPWDIRDILPKVLTAGEKAGTLTEEGAKRL
DVSGNLESGILLAPPEGDAGTGMVATNSVAVRTGNVSAGTSVFAMVVLEKALKAVHEELDMVTTPSGDAVAMVHCNNCTS
DLNAWVGLFKEFSELFGMDIDMNDIYGKLYNNALTADKDCGGLVAFNLFSGEPVIGLNEGRPMFARKPDARMNLANFMRT
HLYASLATLKIGCDILFKEEKVKVDTLYGHGGLFKTKGVGQSILAAAMDAPVAVMETAGEGGPWGMAVLAAYMVNKADGE
PLEKYLSDRVFNGEKGIVMQPDPDDVKGFDEYINTYKAAIEAERAMVKALPL
>Mature_531_residues
SDVKSVIESGRAVLGIEFGSTRIKAVLIGEDHAPIATGAHDWENMLVDGIWTYSLDMIWEGISDCYSKMAQDAKEKYGVT
IKKLAAIGISGMMHGYLPFDEEDNLLVPFRTWRNTITGEAAAELTEVLGFNIPQRWSIAHLYQAILNKEEHVSKISYFTT
LAGYIHWQLTGEKVMGVGEASGMFPIDSKTRDYDAAMLDKFAALDKVKEYPWDIRDILPKVLTAGEKAGTLTEEGAKRLD
VSGNLESGILLAPPEGDAGTGMVATNSVAVRTGNVSAGTSVFAMVVLEKALKAVHEELDMVTTPSGDAVAMVHCNNCTSD
LNAWVGLFKEFSELFGMDIDMNDIYGKLYNNALTADKDCGGLVAFNLFSGEPVIGLNEGRPMFARKPDARMNLANFMRTH
LYASLATLKIGCDILFKEEKVKVDTLYGHGGLFKTKGVGQSILAAAMDAPVAVMETAGEGGPWGMAVLAAYMVNKADGEP
LEKYLSDRVFNGEKGIVMQPDPDDVKGFDEYINTYKAAIEAERAMVKALPL

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 57839; Mature: 57708

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVKSVIESGRAVLGIEFGSTRIKAVLIGEDHAPIATGAHDWENMLVDGIWTYSLDMIW
CCHHHHHHHCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
EGISDCYSKMAQDAKEKYGVTIKKLAAIGISGMMHGYLPFDEEDNLLVPFRTWRNTITGE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHCCCCCCH
AAAELTEVLGFNIPQRWSIAHLYQAILNKEEHVSKISYFTTLAGYIHWQLTGEKVMGVGE
HHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEEECCCEEECCC
ASGMFPIDSKTRDYDAAMLDKFAALDKVKEYPWDIRDILPKVLTAGEKAGTLTEEGAKRL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHEE
DVSGNLESGILLAPPEGDAGTGMVATNSVAVRTGNVSAGTSVFAMVVLEKALKAVHEELD
CCCCCCCCCEEEECCCCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC
MVTTPSGDAVAMVHCNNCTSDLNAWVGLFKEFSELFGMDIDMNDIYGKLYNNALTADKDC
EEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC
GGLVAFNLFSGEPVIGLNEGRPMFARKPDARMNLANFMRTHLYASLATLKIGCDILFKEE
CCEEEEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCEEEEECC
KVKVDTLYGHGGLFKTKGVGQSILAAAMDAPVAVMETAGEGGPWGMAVLAAYMVNKADGE
CEEEEEEECCCCEEECCCCCHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCC
PLEKYLSDRVFNGEKGIVMQPDPDDVKGFDEYINTYKAAIEAERAMVKALPL
HHHHHHHHCEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDVKSVIESGRAVLGIEFGSTRIKAVLIGEDHAPIATGAHDWENMLVDGIWTYSLDMIW
CHHHHHHHCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
EGISDCYSKMAQDAKEKYGVTIKKLAAIGISGMMHGYLPFDEEDNLLVPFRTWRNTITGE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHCCCCCCH
AAAELTEVLGFNIPQRWSIAHLYQAILNKEEHVSKISYFTTLAGYIHWQLTGEKVMGVGE
HHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEEECCCEEECCC
ASGMFPIDSKTRDYDAAMLDKFAALDKVKEYPWDIRDILPKVLTAGEKAGTLTEEGAKRL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHEE
DVSGNLESGILLAPPEGDAGTGMVATNSVAVRTGNVSAGTSVFAMVVLEKALKAVHEELD
CCCCCCCCCEEEECCCCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC
MVTTPSGDAVAMVHCNNCTSDLNAWVGLFKEFSELFGMDIDMNDIYGKLYNNALTADKDC
EEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC
GGLVAFNLFSGEPVIGLNEGRPMFARKPDARMNLANFMRTHLYASLATLKIGCDILFKEE
CCEEEEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCEEEEECC
KVKVDTLYGHGGLFKTKGVGQSILAAAMDAPVAVMETAGEGGPWGMAVLAAYMVNKADGE
CEEEEEEECCCCEEECCCCCHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCC
PLEKYLSDRVFNGEKGIVMQPDPDDVKGFDEYINTYKAAIEAERAMVKALPL
HHHHHHHHCEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]