| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238923066
Identifier: 238923066
GI number: 238923066
Start: 598407
End: 599423
Strand: Direct
Name: 238923066
Synonym: EUBREC_0656
Alternate gene names: NA
Gene position: 598407-599423 (Clockwise)
Preceding gene: 238923065
Following gene: 238923068
Centisome position: 17.35
GC content: 35.3
Gene sequence:
>1017_bases ATGAGCAAAGGATTACAGATAAGAAATAGCACTGTTGATTTCTTGGTTTTCACACGAGATGCAGGAGAAGACGGAATAGA AGTCAGGGTTCAGAATGGCGATGTATGGCTTACGCAGAAGGCAATTTCACGGCTTTTTGATGTAGATAGAAGTGTGATTA CAAAACATCTGAGCAATATTTTTAAAGAGGGAGAATTAGATGAAAATTCAGTTTGTGCAAAATTTGCACAAACTGCGGAT GATGGGAAAACATACAATTATAAGTTTTATTCATTAGCTGCAATTATTGCTGTGGGCTATCGCATTAATTCAGAGCGGGC AATGCAGTTTAGAACATGGGCAACAAAGGTATTGGATACATTTACAAAGCAGGGTTATGTTCTTGATAAAAGCAGATTGA TTAATGGACAGATTTTCGACGAAGATTATTTTGAGCATCTTATTGCTGAGATTCAGGAAATCAGAGCAAGTGAGAGAAGA TTTTACCAGAAAATTACAGACATATATGCAACAGCAGTTGATTATGATAAGAATTCACAGGTGACAAGAGAATTTTATGC AACAGTTCAGAATAAGATGCATTATGCAGTTCATGGTAATACAGCGGCAGAAGTGATAGTGGCAAGAGCTGATCATAATA AGGAACATATGGGACTTAAATCATGGAAAAATGCGCCTGATGGTAAAATAGTAAAAACAGATGTGTCAATTGCAAAAAAC TACTTGGAAAAAGAAGAACTTGCAGAATTAAATGAGATTGTGACAATGTATCTTGATTATGCAACAAGACAGGCACGAAG ACATATTCCTATGACTATGGAAGATTGGAAAACAAAGCTTGACGCATTTCTTAGATTTAATGATGCTGATGTACTTCAGG ATAAAGGAAAAGTAACAGCAGCTATTGCAAAGGAATTTGCAGAAAGTGAGTTTGAGAAATACAGAATTATACAGGATTCA CTATATGAAAGTGACTTTGATAAATTGATGAATGATATGGAAAAGAATGATAGCTGA
Upstream 100 bases:
>100_bases TACATTTGGAGATAATGGTTGAGCTGAATAGGACTAAAACATATGGATTCCATAAGATGTAAAGAAGACGTTTCATGAGA ATAGAGAAAGGAATGCGTTT
Downstream 100 bases:
>100_bases TATTTATCACGTTACAAAACAGTGTCCATTAAGATACAAGAAAGTATATTTCGCTGGATGATAAGAATCAGTATTTGATC ATAGGAAGAAATCCAAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MSKGLQIRNSTVDFLVFTRDAGEDGIEVRVQNGDVWLTQKAISRLFDVDRSVITKHLSNIFKEGELDENSVCAKFAQTAD DGKTYNYKFYSLAAIIAVGYRINSERAMQFRTWATKVLDTFTKQGYVLDKSRLINGQIFDEDYFEHLIAEIQEIRASERR FYQKITDIYATAVDYDKNSQVTREFYATVQNKMHYAVHGNTAAEVIVARADHNKEHMGLKSWKNAPDGKIVKTDVSIAKN YLEKEELAELNEIVTMYLDYATRQARRHIPMTMEDWKTKLDAFLRFNDADVLQDKGKVTAAIAKEFAESEFEKYRIIQDS LYESDFDKLMNDMEKNDS
Sequences:
>Translated_338_residues MSKGLQIRNSTVDFLVFTRDAGEDGIEVRVQNGDVWLTQKAISRLFDVDRSVITKHLSNIFKEGELDENSVCAKFAQTAD DGKTYNYKFYSLAAIIAVGYRINSERAMQFRTWATKVLDTFTKQGYVLDKSRLINGQIFDEDYFEHLIAEIQEIRASERR FYQKITDIYATAVDYDKNSQVTREFYATVQNKMHYAVHGNTAAEVIVARADHNKEHMGLKSWKNAPDGKIVKTDVSIAKN YLEKEELAELNEIVTMYLDYATRQARRHIPMTMEDWKTKLDAFLRFNDADVLQDKGKVTAAIAKEFAESEFEKYRIIQDS LYESDFDKLMNDMEKNDS >Mature_337_residues SKGLQIRNSTVDFLVFTRDAGEDGIEVRVQNGDVWLTQKAISRLFDVDRSVITKHLSNIFKEGELDENSVCAKFAQTADD GKTYNYKFYSLAAIIAVGYRINSERAMQFRTWATKVLDTFTKQGYVLDKSRLINGQIFDEDYFEHLIAEIQEIRASERRF YQKITDIYATAVDYDKNSQVTREFYATVQNKMHYAVHGNTAAEVIVARADHNKEHMGLKSWKNAPDGKIVKTDVSIAKNY LEKEELAELNEIVTMYLDYATRQARRHIPMTMEDWKTKLDAFLRFNDADVLQDKGKVTAAIAKEFAESEFEKYRIIQDSL YESDFDKLMNDMEKNDS
Specific function: Unknown
COG id: COG3943
COG function: function code R; Virulence protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39122; Mature: 38991
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKGLQIRNSTVDFLVFTRDAGEDGIEVRVQNGDVWLTQKAISRLFDVDRSVITKHLSNI CCCCCEEECCCEEEEEEECCCCCCCCEEEEECCCEEEEHHHHHHHHHCCHHHHHHHHHHH FKEGELDENSVCAKFAQTADDGKTYNYKFYSLAAIIAVGYRINSERAMQFRTWATKVLDT HHCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCEECCHHHHHHHHHHHHHHHH FTKQGYVLDKSRLINGQIFDEDYFEHLIAEIQEIRASERRFYQKITDIYATAVDYDKNSQ HHHCCEEEEHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH VTREFYATVQNKMHYAVHGNTAAEVIVARADHNKEHMGLKSWKNAPDGKIVKTDVSIAKN HHHHHHHHHHHCEEEEEECCCHHEEEEEECCCCCHHCCHHHHCCCCCCCEEEHHHHHHHH YLEKEELAELNEIVTMYLDYATRQARRHIPMTMEDWKTKLDAFLRFNDADVLQDKGKVTA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCHHH AIAKEFAESEFEKYRIIQDSLYESDFDKLMNDMEKNDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SKGLQIRNSTVDFLVFTRDAGEDGIEVRVQNGDVWLTQKAISRLFDVDRSVITKHLSNI CCCCEEECCCEEEEEEECCCCCCCCEEEEECCCEEEEHHHHHHHHHCCHHHHHHHHHHH FKEGELDENSVCAKFAQTADDGKTYNYKFYSLAAIIAVGYRINSERAMQFRTWATKVLDT HHCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCEECCHHHHHHHHHHHHHHHH FTKQGYVLDKSRLINGQIFDEDYFEHLIAEIQEIRASERRFYQKITDIYATAVDYDKNSQ HHHCCEEEEHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH VTREFYATVQNKMHYAVHGNTAAEVIVARADHNKEHMGLKSWKNAPDGKIVKTDVSIAKN HHHHHHHHHHHCEEEEEECCCHHEEEEEECCCCCHHCCHHHHCCCCCCCEEEHHHHHHHH YLEKEELAELNEIVTMYLDYATRQARRHIPMTMEDWKTKLDAFLRFNDADVLQDKGKVTA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCHHH AIAKEFAESEFEKYRIIQDSLYESDFDKLMNDMEKNDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA