Definition Eubacterium rectale ATCC 33656, complete genome.
Accession NC_012781
Length 3,449,685

Click here to switch to the map view.

The map label for this gene is 238923066

Identifier: 238923066

GI number: 238923066

Start: 598407

End: 599423

Strand: Direct

Name: 238923066

Synonym: EUBREC_0656

Alternate gene names: NA

Gene position: 598407-599423 (Clockwise)

Preceding gene: 238923065

Following gene: 238923068

Centisome position: 17.35

GC content: 35.3

Gene sequence:

>1017_bases
ATGAGCAAAGGATTACAGATAAGAAATAGCACTGTTGATTTCTTGGTTTTCACACGAGATGCAGGAGAAGACGGAATAGA
AGTCAGGGTTCAGAATGGCGATGTATGGCTTACGCAGAAGGCAATTTCACGGCTTTTTGATGTAGATAGAAGTGTGATTA
CAAAACATCTGAGCAATATTTTTAAAGAGGGAGAATTAGATGAAAATTCAGTTTGTGCAAAATTTGCACAAACTGCGGAT
GATGGGAAAACATACAATTATAAGTTTTATTCATTAGCTGCAATTATTGCTGTGGGCTATCGCATTAATTCAGAGCGGGC
AATGCAGTTTAGAACATGGGCAACAAAGGTATTGGATACATTTACAAAGCAGGGTTATGTTCTTGATAAAAGCAGATTGA
TTAATGGACAGATTTTCGACGAAGATTATTTTGAGCATCTTATTGCTGAGATTCAGGAAATCAGAGCAAGTGAGAGAAGA
TTTTACCAGAAAATTACAGACATATATGCAACAGCAGTTGATTATGATAAGAATTCACAGGTGACAAGAGAATTTTATGC
AACAGTTCAGAATAAGATGCATTATGCAGTTCATGGTAATACAGCGGCAGAAGTGATAGTGGCAAGAGCTGATCATAATA
AGGAACATATGGGACTTAAATCATGGAAAAATGCGCCTGATGGTAAAATAGTAAAAACAGATGTGTCAATTGCAAAAAAC
TACTTGGAAAAAGAAGAACTTGCAGAATTAAATGAGATTGTGACAATGTATCTTGATTATGCAACAAGACAGGCACGAAG
ACATATTCCTATGACTATGGAAGATTGGAAAACAAAGCTTGACGCATTTCTTAGATTTAATGATGCTGATGTACTTCAGG
ATAAAGGAAAAGTAACAGCAGCTATTGCAAAGGAATTTGCAGAAAGTGAGTTTGAGAAATACAGAATTATACAGGATTCA
CTATATGAAAGTGACTTTGATAAATTGATGAATGATATGGAAAAGAATGATAGCTGA

Upstream 100 bases:

>100_bases
TACATTTGGAGATAATGGTTGAGCTGAATAGGACTAAAACATATGGATTCCATAAGATGTAAAGAAGACGTTTCATGAGA
ATAGAGAAAGGAATGCGTTT

Downstream 100 bases:

>100_bases
TATTTATCACGTTACAAAACAGTGTCCATTAAGATACAAGAAAGTATATTTCGCTGGATGATAAGAATCAGTATTTGATC
ATAGGAAGAAATCCAAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSKGLQIRNSTVDFLVFTRDAGEDGIEVRVQNGDVWLTQKAISRLFDVDRSVITKHLSNIFKEGELDENSVCAKFAQTAD
DGKTYNYKFYSLAAIIAVGYRINSERAMQFRTWATKVLDTFTKQGYVLDKSRLINGQIFDEDYFEHLIAEIQEIRASERR
FYQKITDIYATAVDYDKNSQVTREFYATVQNKMHYAVHGNTAAEVIVARADHNKEHMGLKSWKNAPDGKIVKTDVSIAKN
YLEKEELAELNEIVTMYLDYATRQARRHIPMTMEDWKTKLDAFLRFNDADVLQDKGKVTAAIAKEFAESEFEKYRIIQDS
LYESDFDKLMNDMEKNDS

Sequences:

>Translated_338_residues
MSKGLQIRNSTVDFLVFTRDAGEDGIEVRVQNGDVWLTQKAISRLFDVDRSVITKHLSNIFKEGELDENSVCAKFAQTAD
DGKTYNYKFYSLAAIIAVGYRINSERAMQFRTWATKVLDTFTKQGYVLDKSRLINGQIFDEDYFEHLIAEIQEIRASERR
FYQKITDIYATAVDYDKNSQVTREFYATVQNKMHYAVHGNTAAEVIVARADHNKEHMGLKSWKNAPDGKIVKTDVSIAKN
YLEKEELAELNEIVTMYLDYATRQARRHIPMTMEDWKTKLDAFLRFNDADVLQDKGKVTAAIAKEFAESEFEKYRIIQDS
LYESDFDKLMNDMEKNDS
>Mature_337_residues
SKGLQIRNSTVDFLVFTRDAGEDGIEVRVQNGDVWLTQKAISRLFDVDRSVITKHLSNIFKEGELDENSVCAKFAQTADD
GKTYNYKFYSLAAIIAVGYRINSERAMQFRTWATKVLDTFTKQGYVLDKSRLINGQIFDEDYFEHLIAEIQEIRASERRF
YQKITDIYATAVDYDKNSQVTREFYATVQNKMHYAVHGNTAAEVIVARADHNKEHMGLKSWKNAPDGKIVKTDVSIAKNY
LEKEELAELNEIVTMYLDYATRQARRHIPMTMEDWKTKLDAFLRFNDADVLQDKGKVTAAIAKEFAESEFEKYRIIQDSL
YESDFDKLMNDMEKNDS

Specific function: Unknown

COG id: COG3943

COG function: function code R; Virulence protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39122; Mature: 38991

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKGLQIRNSTVDFLVFTRDAGEDGIEVRVQNGDVWLTQKAISRLFDVDRSVITKHLSNI
CCCCCEEECCCEEEEEEECCCCCCCCEEEEECCCEEEEHHHHHHHHHCCHHHHHHHHHHH
FKEGELDENSVCAKFAQTADDGKTYNYKFYSLAAIIAVGYRINSERAMQFRTWATKVLDT
HHCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCEECCHHHHHHHHHHHHHHHH
FTKQGYVLDKSRLINGQIFDEDYFEHLIAEIQEIRASERRFYQKITDIYATAVDYDKNSQ
HHHCCEEEEHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
VTREFYATVQNKMHYAVHGNTAAEVIVARADHNKEHMGLKSWKNAPDGKIVKTDVSIAKN
HHHHHHHHHHHCEEEEEECCCHHEEEEEECCCCCHHCCHHHHCCCCCCCEEEHHHHHHHH
YLEKEELAELNEIVTMYLDYATRQARRHIPMTMEDWKTKLDAFLRFNDADVLQDKGKVTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCHHH
AIAKEFAESEFEKYRIIQDSLYESDFDKLMNDMEKNDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SKGLQIRNSTVDFLVFTRDAGEDGIEVRVQNGDVWLTQKAISRLFDVDRSVITKHLSNI
CCCCEEECCCEEEEEEECCCCCCCCEEEEECCCEEEEHHHHHHHHHCCHHHHHHHHHHH
FKEGELDENSVCAKFAQTADDGKTYNYKFYSLAAIIAVGYRINSERAMQFRTWATKVLDT
HHCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCEECCHHHHHHHHHHHHHHHH
FTKQGYVLDKSRLINGQIFDEDYFEHLIAEIQEIRASERRFYQKITDIYATAVDYDKNSQ
HHHCCEEEEHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
VTREFYATVQNKMHYAVHGNTAAEVIVARADHNKEHMGLKSWKNAPDGKIVKTDVSIAKN
HHHHHHHHHHHCEEEEEECCCHHEEEEEECCCCCHHCCHHHHCCCCCCCEEEHHHHHHHH
YLEKEELAELNEIVTMYLDYATRQARRHIPMTMEDWKTKLDAFLRFNDADVLQDKGKVTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCHHH
AIAKEFAESEFEKYRIIQDSLYESDFDKLMNDMEKNDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA