| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238923062
Identifier: 238923062
GI number: 238923062
Start: 592233
End: 593612
Strand: Direct
Name: 238923062
Synonym: EUBREC_0652
Alternate gene names: NA
Gene position: 592233-593612 (Clockwise)
Preceding gene: 238923061
Following gene: 238923063
Centisome position: 17.17
GC content: 37.68
Gene sequence:
>1380_bases ATGAAGGAAAAAGAACATCAATCCATAGAGTGGAAGGAATCATGGCAGGATGAGTATTTGAAATGGATTTGTGGATATGC CAATGCCTATGGTGGAACAATATACATAGGTACGGATGACGATGGTAATGTTGTAGGTATTGATAATGCAAGAGATTTAT TAGAGCGAATCCCCAATAAAATTACGGACACAATGGGAATCATTGTAGATGTAAATTTGTTATATAAAGGCGAACTTGAG TATCTGCAGATAATTGTTGATAAATATCCATCTTTAATAAGTTTTCGTGGGAAATATTATTATCGTTCAGGAAGTACCAT GCGTGAAATTACCGGAAAGGAATTAGAAAGAGCTTTGTTAAAAACGCAGGGAAGAACATGGGATGGTGTGCCTCTACCCA AACTGACGGTAGCTGATTTAAAGCAGGATGCAATACAGTTATTCAAAGATAAGGCAGTGAAAAGAGGAAGGCTTACAAAG GAAGAAGTCAGTGTGGAAGATACTATATTGATGGATAACCTGCACCTGATTGATGAAGATGGATATTTGATAAGAGCAGC AATGCTTGCGTTTTATAAAGATCCAGAGAAGTGGGTAACAGGTTCTTATATCAAAATCGGATATTTTGGAAAATCAGATT CGGATTTGGTGTACCAGGATGAGGTGCACGGTCCTTTGATAGAGCAGGTAGATAAGACCGTTGATTTAGTTTATACAAAA TATATGAAGGCATTGATTGATTATGAGGGAGTCCAGAGAATTGAGCAGTTTATGTTCCACAAGGACGCATTTCGTGAGAT TTTGTTAAATGCCGTTGTTCATAAGGATTACAGCAGTTGCAATCCAATTCAGATTAGCGTTTACGAGGACAAGATATATA TTTGGAATGATGGTGAGATGCCTCCAAATCTGGATTCTACTGACAAGTTGTTTATGAAACATTCATCAAAGCCTTATAAT CCGAAATTGGCTAACGTCTTTTTCAAAAGCGGTATGATTGAAGCTTGGGGAAGAGGATTTGAGAAGATTAGGGAAGCCTG TGCGTTGTATGATGGACCATTGCCGGAATACGAGATTAATGAGGCTGGAATTATGGTTCTTTGCAAGGCTTGTGATAAGT ATCTGGGGTTGTTGAGGAATGATGGTCAGCATCATGGTCAATGCGACCAAGAAGGTGACCATGATGAAGAACAAGATATA ATGAGGCAGATAATCGCATTTTGCATGGAACCCAAAACTGCAAGTGAAATAATGCAAAAATTCAATTTGGAGCGTTCATA TTTTCGAAGGCATTATCTAAATAAGATGCTCAAAACTGGTAAGTTACAAAGAACTGAGCCTGATAAACCGAAAAGTAAGA ATCAAAAGTATTATTCGTAA
Upstream 100 bases:
>100_bases AACAAATAAAAGAATTATTTGATGCAAATATGTTTGTGGATACATTGGAGTATTTTTTTACGGAAGTGGATAAGTAGTAA TTTGGAAAGTTGGTGGATAT
Downstream 100 bases:
>100_bases ACATATTCATCAACTTGGTCACAATGACCAAGTTGAGAACATGTAATGTAAAACAATATATTTAGAAAAGGATTCGTTTT ATACGTTATGAGGGAACAGA
Product: ATP-dependent DNA helicase RecG-related protein
Products: NA
Alternate protein names: ATP-Dependent DNA Helicase; ATP-Dependent DNA Helicase RecG; Divergent AAA Domain Protein; ATP-Dependent DNA Helicase RecG-Related Protein; Divergent AAA ATPase; DNA Recombinase RecG; AAA-4 Family Protein; Transcription Regulator HTH/DeoR Family; Divergent AAA Domain Family
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MKEKEHQSIEWKESWQDEYLKWICGYANAYGGTIYIGTDDDGNVVGIDNARDLLERIPNKITDTMGIIVDVNLLYKGELE YLQIIVDKYPSLISFRGKYYYRSGSTMREITGKELERALLKTQGRTWDGVPLPKLTVADLKQDAIQLFKDKAVKRGRLTK EEVSVEDTILMDNLHLIDEDGYLIRAAMLAFYKDPEKWVTGSYIKIGYFGKSDSDLVYQDEVHGPLIEQVDKTVDLVYTK YMKALIDYEGVQRIEQFMFHKDAFREILLNAVVHKDYSSCNPIQISVYEDKIYIWNDGEMPPNLDSTDKLFMKHSSKPYN PKLANVFFKSGMIEAWGRGFEKIREACALYDGPLPEYEINEAGIMVLCKACDKYLGLLRNDGQHHGQCDQEGDHDEEQDI MRQIIAFCMEPKTASEIMQKFNLERSYFRRHYLNKMLKTGKLQRTEPDKPKSKNQKYYS
Sequences:
>Translated_459_residues MKEKEHQSIEWKESWQDEYLKWICGYANAYGGTIYIGTDDDGNVVGIDNARDLLERIPNKITDTMGIIVDVNLLYKGELE YLQIIVDKYPSLISFRGKYYYRSGSTMREITGKELERALLKTQGRTWDGVPLPKLTVADLKQDAIQLFKDKAVKRGRLTK EEVSVEDTILMDNLHLIDEDGYLIRAAMLAFYKDPEKWVTGSYIKIGYFGKSDSDLVYQDEVHGPLIEQVDKTVDLVYTK YMKALIDYEGVQRIEQFMFHKDAFREILLNAVVHKDYSSCNPIQISVYEDKIYIWNDGEMPPNLDSTDKLFMKHSSKPYN PKLANVFFKSGMIEAWGRGFEKIREACALYDGPLPEYEINEAGIMVLCKACDKYLGLLRNDGQHHGQCDQEGDHDEEQDI MRQIIAFCMEPKTASEIMQKFNLERSYFRRHYLNKMLKTGKLQRTEPDKPKSKNQKYYS >Mature_459_residues MKEKEHQSIEWKESWQDEYLKWICGYANAYGGTIYIGTDDDGNVVGIDNARDLLERIPNKITDTMGIIVDVNLLYKGELE YLQIIVDKYPSLISFRGKYYYRSGSTMREITGKELERALLKTQGRTWDGVPLPKLTVADLKQDAIQLFKDKAVKRGRLTK EEVSVEDTILMDNLHLIDEDGYLIRAAMLAFYKDPEKWVTGSYIKIGYFGKSDSDLVYQDEVHGPLIEQVDKTVDLVYTK YMKALIDYEGVQRIEQFMFHKDAFREILLNAVVHKDYSSCNPIQISVYEDKIYIWNDGEMPPNLDSTDKLFMKHSSKPYN PKLANVFFKSGMIEAWGRGFEKIREACALYDGPLPEYEINEAGIMVLCKACDKYLGLLRNDGQHHGQCDQEGDHDEEQDI MRQIIAFCMEPKTASEIMQKFNLERSYFRRHYLNKMLKTGKLQRTEPDKPKSKNQKYYS
Specific function: Unknown
COG id: COG2865
COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53339; Mature: 53339
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKEHQSIEWKESWQDEYLKWICGYANAYGGTIYIGTDDDGNVVGIDNARDLLERIPNK CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCHHHHHHHCCHH ITDTMGIIVDVNLLYKGELEYLQIIVDKYPSLISFRGKYYYRSGSTMREITGKELERALL HHHHHEEEEEEEEEEECCHHHHHHHHHHCCHHHEECCCEEEECCCHHHHHHHHHHHHHHH KTQGRTWDGVPLPKLTVADLKQDAIQLFKDKAVKRGRLTKEEVSVEDTILMDNLHLIDED HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHEEEECCCEEECCC GYLIRAAMLAFYKDPEKWVTGSYIKIGYFGKSDSDLVYQDEVHGPLIEQVDKTVDLVYTK CHHHHHHHHHHHCCCHHHCCCCEEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHH YMKALIDYEGVQRIEQFMFHKDAFREILLNAVVHKDYSSCNPIQISVYEDKIYIWNDGEM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECEEEEEECCCC PPNLDSTDKLFMKHSSKPYNPKLANVFFKSGMIEAWGRGFEKIREACALYDGPLPEYEIN CCCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEC EAGIMVLCKACDKYLGLLRNDGQHHGQCDQEGDHDEEQDIMRQIIAFCMEPKTASEIMQK CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH FNLERSYFRRHYLNKMLKTGKLQRTEPDKPKSKNQKYYS HCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKEKEHQSIEWKESWQDEYLKWICGYANAYGGTIYIGTDDDGNVVGIDNARDLLERIPNK CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCHHHHHHHCCHH ITDTMGIIVDVNLLYKGELEYLQIIVDKYPSLISFRGKYYYRSGSTMREITGKELERALL HHHHHEEEEEEEEEEECCHHHHHHHHHHCCHHHEECCCEEEECCCHHHHHHHHHHHHHHH KTQGRTWDGVPLPKLTVADLKQDAIQLFKDKAVKRGRLTKEEVSVEDTILMDNLHLIDED HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHEEEECCCEEECCC GYLIRAAMLAFYKDPEKWVTGSYIKIGYFGKSDSDLVYQDEVHGPLIEQVDKTVDLVYTK CHHHHHHHHHHHCCCHHHCCCCEEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHH YMKALIDYEGVQRIEQFMFHKDAFREILLNAVVHKDYSSCNPIQISVYEDKIYIWNDGEM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECEEEEEECCCC PPNLDSTDKLFMKHSSKPYNPKLANVFFKSGMIEAWGRGFEKIREACALYDGPLPEYEIN CCCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEC EAGIMVLCKACDKYLGLLRNDGQHHGQCDQEGDHDEEQDIMRQIIAFCMEPKTASEIMQK CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH FNLERSYFRRHYLNKMLKTGKLQRTEPDKPKSKNQKYYS HCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA