| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238923055
Identifier: 238923055
GI number: 238923055
Start: 585075
End: 585641
Strand: Direct
Name: 238923055
Synonym: EUBREC_0645
Alternate gene names: NA
Gene position: 585075-585641 (Clockwise)
Preceding gene: 238923054
Following gene: 238923056
Centisome position: 16.96
GC content: 32.45
Gene sequence:
>567_bases ATGTCATATCAAAATGCAAATTATAGTGCGTTTTATGTTTCGGAACCATTTAGCGAAAGTAATTTAGGGGCAAATTCAAC ACATGATTTTGTTTACTACAATATGTTAAGAATGTGGAAAGGAGAGGATAATAGTTTTCCCTTTAATGATGCACATGATA AGACATATAATGTGCGAGATGGTAGTGATTGGGAAAAGACTCTTAAGCCTAGACTTCATACAAGACTTGACAATTCTAAG AACATTATTTTATTTTTAAGTTCCATTACTGCCAATAGTCGTGCATTGAGGGAGGAAATGAATTACGGAATAGGTACAAA AGGTTTACCGGTAATTGTAATTTATCCAGATTACGACAAGAAGTCAGATATAGTTGATAGTAATGGAAATTTCAAGAAGC AGATTAAAGATTTGTGGGATAAGTTGCCGGCTTTTCGTGATAATATGTCTTCGGTAGCTACATTGCATATTCCATGTACT AAGAGCGTTATTATATCAGCATTGAATAATGAAGATTTTATGGTAAATACAATGGCAGATGCTGAAAAATATTATTATAA ACCATAA
Upstream 100 bases:
>100_bases AATTGTATGGAGATAAAATACATGGAGAAGTTGATGTTGTTATATATAAAGGAGATAAAGATAAAGTAACATTAGACATA TAGTAAAGGAGAAATTTAAT
Downstream 100 bases:
>100_bases ACAATGACATTTTGAAAATAACGAAACTTGTAGTGATTGCAAAATGCTTGCAAAAAGTTCCGAAACGGCAAAGAATATGT AGAATTTTAAGAATAATCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSYQNANYSAFYVSEPFSESNLGANSTHDFVYYNMLRMWKGEDNSFPFNDAHDKTYNVRDGSDWEKTLKPRLHTRLDNSK NIILFLSSITANSRALREEMNYGIGTKGLPVIVIYPDYDKKSDIVDSNGNFKKQIKDLWDKLPAFRDNMSSVATLHIPCT KSVIISALNNEDFMVNTMADAEKYYYKP
Sequences:
>Translated_188_residues MSYQNANYSAFYVSEPFSESNLGANSTHDFVYYNMLRMWKGEDNSFPFNDAHDKTYNVRDGSDWEKTLKPRLHTRLDNSK NIILFLSSITANSRALREEMNYGIGTKGLPVIVIYPDYDKKSDIVDSNGNFKKQIKDLWDKLPAFRDNMSSVATLHIPCT KSVIISALNNEDFMVNTMADAEKYYYKP >Mature_187_residues SYQNANYSAFYVSEPFSESNLGANSTHDFVYYNMLRMWKGEDNSFPFNDAHDKTYNVRDGSDWEKTLKPRLHTRLDNSKN IILFLSSITANSRALREEMNYGIGTKGLPVIVIYPDYDKKSDIVDSNGNFKKQIKDLWDKLPAFRDNMSSVATLHIPCTK SVIISALNNEDFMVNTMADAEKYYYKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21673; Mature: 21542
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYQNANYSAFYVSEPFSESNLGANSTHDFVYYNMLRMWKGEDNSFPFNDAHDKTYNVRD CCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCC GSDWEKTLKPRLHTRLDNSKNIILFLSSITANSRALREEMNYGIGTKGLPVIVIYPDYDK CCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCC KSDIVDSNGNFKKQIKDLWDKLPAFRDNMSSVATLHIPCTKSVIISALNNEDFMVNTMAD CCCEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCEEEEEHHC AEKYYYKP CCHHCCCC >Mature Secondary Structure SYQNANYSAFYVSEPFSESNLGANSTHDFVYYNMLRMWKGEDNSFPFNDAHDKTYNVRD CCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCC GSDWEKTLKPRLHTRLDNSKNIILFLSSITANSRALREEMNYGIGTKGLPVIVIYPDYDK CCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCC KSDIVDSNGNFKKQIKDLWDKLPAFRDNMSSVATLHIPCTKSVIISALNNEDFMVNTMAD CCCEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCEEEEEHHC AEKYYYKP CCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA