| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238923054
Identifier: 238923054
GI number: 238923054
Start: 584164
End: 585057
Strand: Direct
Name: 238923054
Synonym: EUBREC_0644
Alternate gene names: NA
Gene position: 584164-585057 (Clockwise)
Preceding gene: 238923053
Following gene: 238923055
Centisome position: 16.93
GC content: 32.21
Gene sequence:
>894_bases ATGAACAAAGTGAATGTGATAAAACAAAATTTGGAGTTCATAGGTAAAACGTGGATGAAGTGTATTGGCACATTTGCAAG TATATTATCGCTTTTCTTTTTGTTTTGGACTTGGGATGATATACGCATTACGTCAACGCAATATAAATGTGTGATAATAA TATTATTATGTGTGCTTGCACTCATACTTGCAATCCTATGGACGTGTATTTTTAAGAGAACAAAGACAATTTGGGAAAGT CCATCTGGGAAAATAAAAGTATGTTATTCTGATATTATGAAAGATGGGTTTGACAAAAGGAACAAGGAAGAAAAGTTATT TGTAATTCCGGTTAATTCATGTTTTGACACTATTGTAGATGAAGATATATCAACATGTTCAAAGCCATTGGTATCACCTA ATTTGTTACATGGAAGATGGATAAAAACAATGGTTAATAAGGGATTTACTATAGAAGAAATAGACAACAAGATACATAAT TGCTTGGAAATGCAAAATTTACTGCCCAAAAGTATTATTGCTGACGAAGATAAGGAACGTGGGAAAAGAGAAGTATATGA GTTAGGTACAGTGGCGATGATTAGGGGAAATAACAATAGTACCTTTTTGTTACTTGCAATTTCGGAATACGATAAAGATA ATATCGCTCATACTTCTGTCGATGATTTAGAAATGTGCATAAAGTCACTTCTTAATTTTTACGATCAACATGACCAAGGG CATAGATTGGTAATTCCATTGATGGGAACAAACCTTTCGAGAGCAGGATTGTCACATAATGATTCACTGAGAGTAATAAC ATCGTTATTTCAATTGTATGGAGATAAAATACATGGAGAAGTTGATGTTGTTATATATAAAGGAGATAAAGATAAAGTAA CATTAGACATATAG
Upstream 100 bases:
>100_bases TTGGAAAGTTCATAAAGCTGTTTGAGAGTGATGACAGTGGGTGGATTGAGGAGATTAATGAACAAATAGAGTAGTATAAG GAGAGTACAAAAGTTATATT
Downstream 100 bases:
>100_bases TAAAGGAGAAATTTAATATGTCATATCAAAATGCAAATTATAGTGCGTTTTATGTTTCGGAACCATTTAGCGAAAGTAAT TTAGGGGCAAATTCAACACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MNKVNVIKQNLEFIGKTWMKCIGTFASILSLFFLFWTWDDIRITSTQYKCVIIILLCVLALILAILWTCIFKRTKTIWES PSGKIKVCYSDIMKDGFDKRNKEEKLFVIPVNSCFDTIVDEDISTCSKPLVSPNLLHGRWIKTMVNKGFTIEEIDNKIHN CLEMQNLLPKSIIADEDKERGKREVYELGTVAMIRGNNNSTFLLLAISEYDKDNIAHTSVDDLEMCIKSLLNFYDQHDQG HRLVIPLMGTNLSRAGLSHNDSLRVITSLFQLYGDKIHGEVDVVIYKGDKDKVTLDI
Sequences:
>Translated_297_residues MNKVNVIKQNLEFIGKTWMKCIGTFASILSLFFLFWTWDDIRITSTQYKCVIIILLCVLALILAILWTCIFKRTKTIWES PSGKIKVCYSDIMKDGFDKRNKEEKLFVIPVNSCFDTIVDEDISTCSKPLVSPNLLHGRWIKTMVNKGFTIEEIDNKIHN CLEMQNLLPKSIIADEDKERGKREVYELGTVAMIRGNNNSTFLLLAISEYDKDNIAHTSVDDLEMCIKSLLNFYDQHDQG HRLVIPLMGTNLSRAGLSHNDSLRVITSLFQLYGDKIHGEVDVVIYKGDKDKVTLDI >Mature_297_residues MNKVNVIKQNLEFIGKTWMKCIGTFASILSLFFLFWTWDDIRITSTQYKCVIIILLCVLALILAILWTCIFKRTKTIWES PSGKIKVCYSDIMKDGFDKRNKEEKLFVIPVNSCFDTIVDEDISTCSKPLVSPNLLHGRWIKTMVNKGFTIEEIDNKIHN CLEMQNLLPKSIIADEDKERGKREVYELGTVAMIRGNNNSTFLLLAISEYDKDNIAHTSVDDLEMCIKSLLNFYDQHDQG HRLVIPLMGTNLSRAGLSHNDSLRVITSLFQLYGDKIHGEVDVVIYKGDKDKVTLDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34036; Mature: 34036
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKVNVIKQNLEFIGKTWMKCIGTFASILSLFFLFWTWDDIRITSTQYKCVIIILLCVLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH LILAILWTCIFKRTKTIWESPSGKIKVCYSDIMKDGFDKRNKEEKLFVIPVNSCFDTIVD HHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHH EDISTCSKPLVSPNLLHGRWIKTMVNKGFTIEEIDNKIHNCLEMQNLLPKSIIADEDKER HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHCCCHHHH GKREVYELGTVAMIRGNNNSTFLLLAISEYDKDNIAHTSVDDLEMCIKSLLNFYDQHDQG HHHHHHHHCCEEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC HRLVIPLMGTNLSRAGLSHNDSLRVITSLFQLYGDKIHGEVDVVIYKGDKDKVTLDI CEEEEEECCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEC >Mature Secondary Structure MNKVNVIKQNLEFIGKTWMKCIGTFASILSLFFLFWTWDDIRITSTQYKCVIIILLCVLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH LILAILWTCIFKRTKTIWESPSGKIKVCYSDIMKDGFDKRNKEEKLFVIPVNSCFDTIVD HHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHH EDISTCSKPLVSPNLLHGRWIKTMVNKGFTIEEIDNKIHNCLEMQNLLPKSIIADEDKER HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHCCCHHHH GKREVYELGTVAMIRGNNNSTFLLLAISEYDKDNIAHTSVDDLEMCIKSLLNFYDQHDQG HHHHHHHHCCEEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC HRLVIPLMGTNLSRAGLSHNDSLRVITSLFQLYGDKIHGEVDVVIYKGDKDKVTLDI CEEEEEECCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA