| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
Click here to switch to the map view.
The map label for this gene is 238923052
Identifier: 238923052
GI number: 238923052
Start: 582241
End: 583518
Strand: Direct
Name: 238923052
Synonym: EUBREC_0642
Alternate gene names: NA
Gene position: 582241-583518 (Clockwise)
Preceding gene: 238923051
Following gene: 238923053
Centisome position: 16.88
GC content: 33.72
Gene sequence:
>1278_bases ATGATTATAGAGGTAAGAGCAAAAAACTGTTATGCATTTGAGGATGATATTACATTTTCAATGAAAGCAGATATGCGAAA TAAAAAATTTGGAGCAAATGTTCACAAAGAGAATAATTTTAATGTCCTTAAAACGGTAGGAATATATGGACCAAACAATG CCGGTAAAACATGTCTAATCAAGTGCATTAGGGCAATAAGAAATGTACTTTTAAATAAGAAGAATGGACTGATGCCAAAT ATATTTACTGATAGTGATGTATGCAAGTTAGGTGTTACATTTATGGCATCTGGAAGAAAGTTTTCTTATGATTTTAAGTA TGATGCAGAAAAAGAAGAATATATATATGAGTCATTTTCGGAGATATTTAAAGATCAGTACAACAACGAAAAGGAAGTTT GTTGGTTAAAAAAAGATACTGTTAGTGAAATATATGAGTGTATTGATGAATCTGTTCAGAATATGATTTCAGTTGTATCG AAGAATAATTTGCTATGCTATGTGGTAGATACAAGTAAATTCGAACATATCAATGAGATGAAGCAGATTCTTGTCGGATT TGCAGAAAAAATTGATATCATCAATATGAATAACATACCTATGCAGCACACGATTGAACTTATGAAGAATAAGAATCAGT TACAGCAAAAGGTTGTTGAGTTCATAAAAAATGCTGACTTATATATGGATAATTTTGAATATGTGGATATGGATAAGATA CAGTTGAAAACTGGTGAAGGTGACGAAAAGCCAGATGAGAAAGTGCTTGATATTCCAGAGAACATTATGGATCAAATCAG ATTGGTTTCTACTTATAAGGGAGTCCATGTGCCAAGTATGATGTTTGACTCCACAGGAACAAAGAAGATTGCAGCTATTG CCAGCTATGTAATTGAAGCACTTGAACAAGGCAGGATTTTAGTCGTGGATGAGTTGGATAGCAGTATTCATTTTAAGCTC ACCAGGGCGATTGTTGCGATGTTTAATAATGAATTAAATACAAGTGCACAGATGATATTTACAGTACATGATATAAATCT TATGGATTGCAAGAGAATGTTTCGAAAGGAGCAGATTTGGTTTGTTCATAAGGATGAAGAAGGGGTGTATGTATATTCAC TTGCAGATTTTACAGCTCAGCAGGGAGTACGAGATACGACAGATGTTATGGAAAAATATAGGAAAGGTGCGCTTGGCGCT TTACCTGATCCTGAATTGATTAACTCATTGCTTAGTATTAAAAGTGGTGTAAAGGGGGATGATGCCGATGCCAAATAA
Upstream 100 bases:
>100_bases TATAGAATTAAATATTTTTTATGAAAAAAAGTTGCATAAAAAATATTTAATGATATAATAATGATAAGTAAATAGGAAAA GTGACTTGGAGGAATGAGCC
Downstream 100 bases:
>100_bases GCTCCCTAAGTTTTTGGATAACCATAAAATCTGTATTATCTGTGAAGGTAATGAGGAATATGAGTATCTAAATCGATTAA AAAATTTAAAAATATGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MIIEVRAKNCYAFEDDITFSMKADMRNKKFGANVHKENNFNVLKTVGIYGPNNAGKTCLIKCIRAIRNVLLNKKNGLMPN IFTDSDVCKLGVTFMASGRKFSYDFKYDAEKEEYIYESFSEIFKDQYNNEKEVCWLKKDTVSEIYECIDESVQNMISVVS KNNLLCYVVDTSKFEHINEMKQILVGFAEKIDIINMNNIPMQHTIELMKNKNQLQQKVVEFIKNADLYMDNFEYVDMDKI QLKTGEGDEKPDEKVLDIPENIMDQIRLVSTYKGVHVPSMMFDSTGTKKIAAIASYVIEALEQGRILVVDELDSSIHFKL TRAIVAMFNNELNTSAQMIFTVHDINLMDCKRMFRKEQIWFVHKDEEGVYVYSLADFTAQQGVRDTTDVMEKYRKGALGA LPDPELINSLLSIKSGVKGDDADAK
Sequences:
>Translated_425_residues MIIEVRAKNCYAFEDDITFSMKADMRNKKFGANVHKENNFNVLKTVGIYGPNNAGKTCLIKCIRAIRNVLLNKKNGLMPN IFTDSDVCKLGVTFMASGRKFSYDFKYDAEKEEYIYESFSEIFKDQYNNEKEVCWLKKDTVSEIYECIDESVQNMISVVS KNNLLCYVVDTSKFEHINEMKQILVGFAEKIDIINMNNIPMQHTIELMKNKNQLQQKVVEFIKNADLYMDNFEYVDMDKI QLKTGEGDEKPDEKVLDIPENIMDQIRLVSTYKGVHVPSMMFDSTGTKKIAAIASYVIEALEQGRILVVDELDSSIHFKL TRAIVAMFNNELNTSAQMIFTVHDINLMDCKRMFRKEQIWFVHKDEEGVYVYSLADFTAQQGVRDTTDVMEKYRKGALGA LPDPELINSLLSIKSGVKGDDADAK >Mature_425_residues MIIEVRAKNCYAFEDDITFSMKADMRNKKFGANVHKENNFNVLKTVGIYGPNNAGKTCLIKCIRAIRNVLLNKKNGLMPN IFTDSDVCKLGVTFMASGRKFSYDFKYDAEKEEYIYESFSEIFKDQYNNEKEVCWLKKDTVSEIYECIDESVQNMISVVS KNNLLCYVVDTSKFEHINEMKQILVGFAEKIDIINMNNIPMQHTIELMKNKNQLQQKVVEFIKNADLYMDNFEYVDMDKI QLKTGEGDEKPDEKVLDIPENIMDQIRLVSTYKGVHVPSMMFDSTGTKKIAAIASYVIEALEQGRILVVDELDSSIHFKL TRAIVAMFNNELNTSAQMIFTVHDINLMDCKRMFRKEQIWFVHKDEEGVYVYSLADFTAQQGVRDTTDVMEKYRKGALGA LPDPELINSLLSIKSGVKGDDADAK
Specific function: Unknown
COG id: COG1106
COG function: function code R; Predicted ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48765; Mature: 48765
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIEVRAKNCYAFEDDITFSMKADMRNKKFGANVHKENNFNVLKTVGIYGPNNAGKTCLI CEEEEECCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHH KCIRAIRNVLLNKKNGLMPNIFTDSDVCKLGVTFMASGRKFSYDFKYDAEKEEYIYESFS HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEEECCCEEEEECCCCCCHHHHHHHHHH EIFKDQYNNEKEVCWLKKDTVSEIYECIDESVQNMISVVSKNNLLCYVVDTSKFEHINEM HHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH KQILVGFAEKIDIINMNNIPMQHTIELMKNKNQLQQKVVEFIKNADLYMDNFEYVDMDKI HHHHHHHHHHEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCEEECCCCEECCCEE QLKTGEGDEKPDEKVLDIPENIMDQIRLVSTYKGVHVPSMMFDSTGTKKIAAIASYVIEA EEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHH LEQGRILVVDELDSSIHFKLTRAIVAMFNNELNTSAQMIFTVHDINLMDCKRMFRKEQIW HHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHCCEE FVHKDEEGVYVYSLADFTAQQGVRDTTDVMEKYRKGALGALPDPELINSLLSIKSGVKGD EEEECCCCEEEEEEHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCC DADAK CCCCC >Mature Secondary Structure MIIEVRAKNCYAFEDDITFSMKADMRNKKFGANVHKENNFNVLKTVGIYGPNNAGKTCLI CEEEEECCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHH KCIRAIRNVLLNKKNGLMPNIFTDSDVCKLGVTFMASGRKFSYDFKYDAEKEEYIYESFS HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEEECCCEEEEECCCCCCHHHHHHHHHH EIFKDQYNNEKEVCWLKKDTVSEIYECIDESVQNMISVVSKNNLLCYVVDTSKFEHINEM HHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH KQILVGFAEKIDIINMNNIPMQHTIELMKNKNQLQQKVVEFIKNADLYMDNFEYVDMDKI HHHHHHHHHHEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCEEECCCCEECCCEE QLKTGEGDEKPDEKVLDIPENIMDQIRLVSTYKGVHVPSMMFDSTGTKKIAAIASYVIEA EEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHH LEQGRILVVDELDSSIHFKLTRAIVAMFNNELNTSAQMIFTVHDINLMDCKRMFRKEQIW HHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHCCEE FVHKDEEGVYVYSLADFTAQQGVRDTTDVMEKYRKGALGALPDPELINSLLSIKSGVKGD EEEECCCCEEEEEEHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCC DADAK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA