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The map label for this gene is int [H]

Identifier: 238923034

GI number: 238923034

Start: 569927

End: 571012

Strand: Direct

Name: int [H]

Synonym: EUBREC_0624

Alternate gene names: 238923034

Gene position: 569927-571012 (Clockwise)

Preceding gene: 238923033

Following gene: 238923035

Centisome position: 16.52

GC content: 37.85

Gene sequence:

>1086_bases
TTGACAGTAATCAAAAACCAAAAGTCAAATACTTACGAGGTAAGAACCTATTATAAGGATTGGACCGGCGTAAGAAAGCA
GAAGACGAAAAGGGGATTTAAACGTAAATGTGATGCCCAGGAATGGGAAAGAGCGTTTAAGTTAAAGGAGAATTTGAGTC
TGGATATGTATTTTGAAGATTTCGTAGATCTTTATCTGAATGATATCAAATCCAGAATCAAATATAATACCTGGCTGACG
AAAAAGCATATTGTAGAAAAAAAGATTCTCCCATATTTTTCGAAAAAGAAGTTGCAGGAAATAAAACCTTCCGATATTCG
ACAGTGGCAGAACACCATGATGAACTATCGGAATAAACAAGGAGAAGGCTATTCGCAGGTCTATCTAAAGACCATCCATA
ATCAGCTGAGTGCAATTTTGAATCATGCAGTTAATTTCTATGATTTGAAAAGCAATGCTGCACGCAAGGCTGGATCTATG
GGAAAAGAAAGAACAAAAGAGATGCTTTTCTGGACAAAAGAAGAGTATATGAAGTTTATTGAAGCGGTGGCGGATAAGCC
AATTTCCTTTTATGCATTTGAAATCTTATATTGGTGTGGAGTGCGTATGGGAGAGTTGTTAGCGCTGACACCGGCAGATT
TCGATTTTCAGGCTTGTACTATCCGAATCAATAAATCTTATCAAAGATTAGAGGGGAAGGATATTATTACGGATCCTAAG
ACTACGAAGCGTAATCGCATGATCACCATGCCGGAATTTTTAAGCGAAGAATTAGAATCGTATATAGGAATGCTGTATGG
TCTGAATGAAAATGACAGGATATTTCAAATTTCAAAAAGTTATCTTCACCATGAAATGGATCGTGGTGTGAAGCTGTCAG
GAGTGAAGAGGATACGAATCCATGATTTACGACATTCTCATGTGTCGTTATTGATCAATATGGGATATTCTGCGGTGGCA
ATTGGAGAAAGGGTAGGACATGAAAGTGTGGAGATCACATATCGATATGCACATTTGTTCCCGACAATCCAAACAGAAAT
GGCGGAAAATCTAAATCAGGAAAGAGAGGAATATCTGGATGAGTGA

Upstream 100 bases:

>100_bases
AGCAAAAAGGTTTCGTTGTTGTCAAAGGAAAAATCAGCCGTAAATATTTTGAAGAACGAGTTTACGGTATGAACGAAATG
AAATAGTAGGAGGTGATGTT

Downstream 100 bases:

>100_bases
AAAAAATAGGGATAGCAAGAATCGGTGGCGTAATGTAACCATAGCATTTCGAATGTCTCCGGAAGAAGATGCAGAATTAG
ATTTAAGAGTGAAACTTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MTVIKNQKSNTYEVRTYYKDWTGVRKQKTKRGFKRKCDAQEWERAFKLKENLSLDMYFEDFVDLYLNDIKSRIKYNTWLT
KKHIVEKKILPYFSKKKLQEIKPSDIRQWQNTMMNYRNKQGEGYSQVYLKTIHNQLSAILNHAVNFYDLKSNAARKAGSM
GKERTKEMLFWTKEEYMKFIEAVADKPISFYAFEILYWCGVRMGELLALTPADFDFQACTIRINKSYQRLEGKDIITDPK
TTKRNRMITMPEFLSEELESYIGMLYGLNENDRIFQISKSYLHHEMDRGVKLSGVKRIRIHDLRHSHVSLLINMGYSAVA
IGERVGHESVEITYRYAHLFPTIQTEMAENLNQEREEYLDE

Sequences:

>Translated_361_residues
MTVIKNQKSNTYEVRTYYKDWTGVRKQKTKRGFKRKCDAQEWERAFKLKENLSLDMYFEDFVDLYLNDIKSRIKYNTWLT
KKHIVEKKILPYFSKKKLQEIKPSDIRQWQNTMMNYRNKQGEGYSQVYLKTIHNQLSAILNHAVNFYDLKSNAARKAGSM
GKERTKEMLFWTKEEYMKFIEAVADKPISFYAFEILYWCGVRMGELLALTPADFDFQACTIRINKSYQRLEGKDIITDPK
TTKRNRMITMPEFLSEELESYIGMLYGLNENDRIFQISKSYLHHEMDRGVKLSGVKRIRIHDLRHSHVSLLINMGYSAVA
IGERVGHESVEITYRYAHLFPTIQTEMAENLNQEREEYLDE
>Mature_360_residues
TVIKNQKSNTYEVRTYYKDWTGVRKQKTKRGFKRKCDAQEWERAFKLKENLSLDMYFEDFVDLYLNDIKSRIKYNTWLTK
KHIVEKKILPYFSKKKLQEIKPSDIRQWQNTMMNYRNKQGEGYSQVYLKTIHNQLSAILNHAVNFYDLKSNAARKAGSMG
KERTKEMLFWTKEEYMKFIEAVADKPISFYAFEILYWCGVRMGELLALTPADFDFQACTIRINKSYQRLEGKDIITDPKT
TKRNRMITMPEFLSEELESYIGMLYGLNENDRIFQISKSYLHHEMDRGVKLSGVKRIRIHDLRHSHVSLLINMGYSAVAI
GERVGHESVEITYRYAHLFPTIQTEMAENLNQEREEYLDE

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 42967; Mature: 42836

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVIKNQKSNTYEVRTYYKDWTGVRKQKTKRGFKRKCDAQEWERAFKLKENLSLDMYFED
CCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEHHHHH
FVDLYLNDIKSRIKYNTWLTKKHIVEKKILPYFSKKKLQEIKPSDIRQWQNTMMNYRNKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
GEGYSQVYLKTIHNQLSAILNHAVNFYDLKSNAARKAGSMGKERTKEMLFWTKEEYMKFI
CCCHHHHHHHHHHHHHHHHHHHHCHHEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
EAVADKPISFYAFEILYWCGVRMGELLALTPADFDFQACTIRINKSYQRLEGKDIITDPK
HHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCHHHHCCCCCCCCCCC
TTKRNRMITMPEFLSEELESYIGMLYGLNENDRIFQISKSYLHHEMDRGVKLSGVKRIRI
CCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCEECCEEEEEH
HDLRHSHVSLLINMGYSAVAIGERVGHESVEITYRYAHLFPTIQTEMAENLNQEREEYLD
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCC
E
C
>Mature Secondary Structure 
TVIKNQKSNTYEVRTYYKDWTGVRKQKTKRGFKRKCDAQEWERAFKLKENLSLDMYFED
CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEHHHHH
FVDLYLNDIKSRIKYNTWLTKKHIVEKKILPYFSKKKLQEIKPSDIRQWQNTMMNYRNKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
GEGYSQVYLKTIHNQLSAILNHAVNFYDLKSNAARKAGSMGKERTKEMLFWTKEEYMKFI
CCCHHHHHHHHHHHHHHHHHHHHCHHEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
EAVADKPISFYAFEILYWCGVRMGELLALTPADFDFQACTIRINKSYQRLEGKDIITDPK
HHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCHHHHCCCCCCCCCCC
TTKRNRMITMPEFLSEELESYIGMLYGLNENDRIFQISKSYLHHEMDRGVKLSGVKRIRI
CCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCEECCEEEEEH
HDLRHSHVSLLINMGYSAVAIGERVGHESVEITYRYAHLFPTIQTEMAENLNQEREEYLD
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]