| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238922996
Identifier: 238922996
GI number: 238922996
Start: 542380
End: 543009
Strand: Direct
Name: 238922996
Synonym: EUBREC_0585
Alternate gene names: NA
Gene position: 542380-543009 (Clockwise)
Preceding gene: 238922995
Following gene: 238922997
Centisome position: 15.72
GC content: 35.08
Gene sequence:
>630_bases GTGGGAGCACTGGGAGAAACCTTTGACTGGCCGGTGCCTATAACAATGATGCTGAGTCTTGCAGCAGGAATCACGGTAAG TATTTCGGGAAATAAATTGCTGTTTAAAAATGCAGATGGGATAGAGATTGGGTCGAAGACGCTGAGCGATGATGAAATTA AGATTGTTGAAAAGGAGATAGAAAAAAATACCAGAACGGAAATTCTTTCAAGTGAAGAGGCAGAAGAAATAGCCTTTAAT GCAATTCAGGGGGCAGATAAAGCTGATACAGTTGTATTGGGTAAATTCGACGCTTTAAAAGATGCAAATGAAAATTTTGT TTATGATGCAAATGGAAATCTTATACCAACAGATAAATCTTATAATAAAGTTGCAGAACAAATGGGAGCACAGTATTTTC AGTTGGATAATTGGGATGAACTTGCTGCTAAATATGATGATAATGAAATTTGGAAAATAAATGAAAAATTTTTAGATATT CAAATTGCATCTGGTAGAGAAATATACTTGTCTGCAAATCCAGAAGAATTTATTGATGGTACCTCATTTTATTCTAAAGA GCTTCAGTATTTAGAAAAGCATGGATATCATTTTGTGAAGGAAGGAGATATATGGCGTGCTGTTCAATAG
Upstream 100 bases:
>100_bases AAACTCCTTAAGCAAGACGTGGAGATTATAGAGGAAAAAGAGAAGATAGAACTATAGACAGGATATAGTTTTATGGATAT TAGGAAATGCAACCTGTGAT
Downstream 100 bases:
>100_bases CGAATTTTACGAGTTATATGTTAATACATTTGAAAAAAGTATAAAAGATATGTTTGGAACAGATATGAAACAGCGAGTAA AAACTTGTGCATTTCAACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MGALGETFDWPVPITMMLSLAAGITVSISGNKLLFKNADGIEIGSKTLSDDEIKIVEKEIEKNTRTEILSSEEAEEIAFN AIQGADKADTVVLGKFDALKDANENFVYDANGNLIPTDKSYNKVAEQMGAQYFQLDNWDELAAKYDDNEIWKINEKFLDI QIASGREIYLSANPEEFIDGTSFYSKELQYLEKHGYHFVKEGDIWRAVQ
Sequences:
>Translated_209_residues MGALGETFDWPVPITMMLSLAAGITVSISGNKLLFKNADGIEIGSKTLSDDEIKIVEKEIEKNTRTEILSSEEAEEIAFN AIQGADKADTVVLGKFDALKDANENFVYDANGNLIPTDKSYNKVAEQMGAQYFQLDNWDELAAKYDDNEIWKINEKFLDI QIASGREIYLSANPEEFIDGTSFYSKELQYLEKHGYHFVKEGDIWRAVQ >Mature_208_residues GALGETFDWPVPITMMLSLAAGITVSISGNKLLFKNADGIEIGSKTLSDDEIKIVEKEIEKNTRTEILSSEEAEEIAFNA IQGADKADTVVLGKFDALKDANENFVYDANGNLIPTDKSYNKVAEQMGAQYFQLDNWDELAAKYDDNEIWKINEKFLDIQ IASGREIYLSANPEEFIDGTSFYSKELQYLEKHGYHFVKEGDIWRAVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23509; Mature: 23378
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGALGETFDWPVPITMMLSLAAGITVSISGNKLLFKNADGIEIGSKTLSDDEIKIVEKEI CCCCCCCCCCCCHHHHHHHHHCCEEEEECCCEEEEECCCCCEECCCCCCCCHHHHHHHHH EKNTRTEILSSEEAEEIAFNAIQGADKADTVVLGKFDALKDANENFVYDANGNLIPTDKS HHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCHHHCCCCCCEEEECCCCEECCCCH YNKVAEQMGAQYFQLDNWDELAAKYDDNEIWKINEKFLDIQIASGREIYLSANPEEFIDG HHHHHHHHCCCEEECCCHHHHHHCCCCCCEEEECCEEEEEEEECCCEEEEECCHHHHHCC TSFYSKELQYLEKHGYHFVKEGDIWRAVQ CHHHHHHHHHHHHCCCEEEECCCEEECCC >Mature Secondary Structure GALGETFDWPVPITMMLSLAAGITVSISGNKLLFKNADGIEIGSKTLSDDEIKIVEKEI CCCCCCCCCCCHHHHHHHHHCCEEEEECCCEEEEECCCCCEECCCCCCCCHHHHHHHHH EKNTRTEILSSEEAEEIAFNAIQGADKADTVVLGKFDALKDANENFVYDANGNLIPTDKS HHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCHHHCCCCCCEEEECCCCEECCCCH YNKVAEQMGAQYFQLDNWDELAAKYDDNEIWKINEKFLDIQIASGREIYLSANPEEFIDG HHHHHHHHCCCEEECCCHHHHHHCCCCCCEEEECCEEEEEEEECCCEEEEECCHHHHHCC TSFYSKELQYLEKHGYHFVKEGDIWRAVQ CHHHHHHHHHHHHCCCEEEECCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA