| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
Click here to switch to the map view.
The map label for this gene is 238922994
Identifier: 238922994
GI number: 238922994
Start: 539738
End: 541534
Strand: Direct
Name: 238922994
Synonym: EUBREC_0583
Alternate gene names: NA
Gene position: 539738-541534 (Clockwise)
Preceding gene: 238922993
Following gene: 238922995
Centisome position: 15.65
GC content: 38.06
Gene sequence:
>1797_bases ATGGAAGAAGAAATAAAAAAAGCATACATGGATTGGAGTGAAAAAGGTGTAAGCTATTTAAATTGTATGTATGTGTATGA TACAATGATGGATGTGGACGAGGCACTGCAGACCTGTGATACAATTTTAGATGAAATTGACCTGGGAATTGACTATACAT CTAGGGAAAAGGATATTGACAGGCTTTTAGAGGGGCATGGAACCCTTCACCGTTATATTGATGTCTTAAATTGTTACGTG GATGATAAGCTGGATCAGCCTTTAAAGAAAGATTTCAAGAAAAATGCTACAGAAACAATCAGCCGAATCCATCTGGAAGA CTTTGAGGTAGATAATACACTGGGACTGACAGAAAACAATTACATAACCGGCGGAATGGGATATGCCGGAACCATGGTAG AACAGGAAAAAGCAAAGCTGACTTTTGCAGATTTTATTGGAACTTCTGACGGAAAGGCGGATGGAAATGGGCTTCATATA TCGTATACCAATGGAAGTGTAGAAGATTTTGCAAGTATTTTTGCAGCACAGTATGAGGCAATGAAAGCATCCGGAGCTTT GGGAGAAGACAATAATCTTACCCAACAGGAATTTTTGGAGCAGTTTTATAGGCAGGGAGAATTTACCCATGACAGCAGTA ACCCATTTTTAAACTTTGTTTCGTCCGTATTGGATATCACAATTATCAAACCTGTCATAGAGGCATGTACCGGAGAAGAT TTGATAACCGGAGAAGACCTGACAGACATGGAACGTGGACTTAAGGTGGTCTTTGCAATGGTGGATTTGGTTACGCTTGG AGGCGCCATTGCAGCAACAAAGTTCTCGGAAATGGGATTAAAAGAAGGACTTAAGGCATTTGGAAAAACAGCCCTGATAG ACTTTGCGGGAAATACAGCAGCCTGTGGTGTGGGAGCACTGGGAGAAACCTTTGACTGGCCGGTGCCTATAACAATGATG CTGAGTCTTGCAGCAGGAATCACGGTAAGTATTTCGGGAAATAAGTTGTTATTTAAAAATGCAGATGGGATAGAGATTGG GTCGAAGACGCTGAGTGATGCTGAGGTTAAAAAAATCGGGGATGTGTTGGATGAAGGACTAGATATAAATTTTGTTAGCG AAGACCTTAATAATATATTAAAAAACAAGGGAGTAACGTTGGAAGAATTTAATGCATTACGATTACGGGATGTTTCAACA TTGTCTGAAGAAGAAAGAGTAATGCTTAGGAAAATAGGGGAACAGCTAACAGAGGATGAGAGACTAAAACTTATTGGAAA AAGTACATGGGATAAAATTGTTAATTCGATTAGTAGTGAGGATAGGAAAAAGATTCAAGGATGGAAATTTACACCGAGTG ATGAATTGTATATAAAATATAAAGAAATTTATGATAATCCTAAGTATTATAATCAGAAAACAGGTGAAATTCATTGGCCA CCAAATGATGGTTTTAAGGAAGGAAGTAAGTGTAAAAAGGTTATACCCGCTGATACACTATTTAAGAGATATGGAGCTAA TAACGGAGAATTTTTAGGAAACTCAGTAGATTCGTTTGAATCAAGGGCATTAGCACCTCATAGTGAAGGGGCAGAAATTC ATTATTATCAATTAGTAGAAGATTATGAATTTACAACTGGAAAAGCTGCACCTTGGTTTGGAAGTGAGGGAGGAGCACAA CAGTATGTTGTTTATAAGCCAGATGGATCAAAGTATACTATAAAAGAGTTGGAAGAAACAGGTATAATAGAAGATGTCAC AGAGTTGGTAAATAAAGGAGAGATTGTAATTGAGTAA
Upstream 100 bases:
>100_bases CAGGAACGTACATTCAAAATGCTTATAATACTATGTATTATAATGAACAGCAGGTTGTGGAATGGGTCATTGGACAAATT GGAGGAAATGAATAAAAGTT
Downstream 100 bases:
>100_bases TGCACAACACGTATTGAATAAAGAAAATTTAAAAATAGAAAACAAGATAATTACAGAGATGAAAGGAAAAGTAGACCTAG AAAACTATATTTCTATAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 598; Mature: 598
Protein sequence:
>598_residues MEEEIKKAYMDWSEKGVSYLNCMYVYDTMMDVDEALQTCDTILDEIDLGIDYTSREKDIDRLLEGHGTLHRYIDVLNCYV DDKLDQPLKKDFKKNATETISRIHLEDFEVDNTLGLTENNYITGGMGYAGTMVEQEKAKLTFADFIGTSDGKADGNGLHI SYTNGSVEDFASIFAAQYEAMKASGALGEDNNLTQQEFLEQFYRQGEFTHDSSNPFLNFVSSVLDITIIKPVIEACTGED LITGEDLTDMERGLKVVFAMVDLVTLGGAIAATKFSEMGLKEGLKAFGKTALIDFAGNTAACGVGALGETFDWPVPITMM LSLAAGITVSISGNKLLFKNADGIEIGSKTLSDAEVKKIGDVLDEGLDINFVSEDLNNILKNKGVTLEEFNALRLRDVST LSEEERVMLRKIGEQLTEDERLKLIGKSTWDKIVNSISSEDRKKIQGWKFTPSDELYIKYKEIYDNPKYYNQKTGEIHWP PNDGFKEGSKCKKVIPADTLFKRYGANNGEFLGNSVDSFESRALAPHSEGAEIHYYQLVEDYEFTTGKAAPWFGSEGGAQ QYVVYKPDGSKYTIKELEETGIIEDVTELVNKGEIVIE
Sequences:
>Translated_598_residues MEEEIKKAYMDWSEKGVSYLNCMYVYDTMMDVDEALQTCDTILDEIDLGIDYTSREKDIDRLLEGHGTLHRYIDVLNCYV DDKLDQPLKKDFKKNATETISRIHLEDFEVDNTLGLTENNYITGGMGYAGTMVEQEKAKLTFADFIGTSDGKADGNGLHI SYTNGSVEDFASIFAAQYEAMKASGALGEDNNLTQQEFLEQFYRQGEFTHDSSNPFLNFVSSVLDITIIKPVIEACTGED LITGEDLTDMERGLKVVFAMVDLVTLGGAIAATKFSEMGLKEGLKAFGKTALIDFAGNTAACGVGALGETFDWPVPITMM LSLAAGITVSISGNKLLFKNADGIEIGSKTLSDAEVKKIGDVLDEGLDINFVSEDLNNILKNKGVTLEEFNALRLRDVST LSEEERVMLRKIGEQLTEDERLKLIGKSTWDKIVNSISSEDRKKIQGWKFTPSDELYIKYKEIYDNPKYYNQKTGEIHWP PNDGFKEGSKCKKVIPADTLFKRYGANNGEFLGNSVDSFESRALAPHSEGAEIHYYQLVEDYEFTTGKAAPWFGSEGGAQ QYVVYKPDGSKYTIKELEETGIIEDVTELVNKGEIVIE >Mature_598_residues MEEEIKKAYMDWSEKGVSYLNCMYVYDTMMDVDEALQTCDTILDEIDLGIDYTSREKDIDRLLEGHGTLHRYIDVLNCYV DDKLDQPLKKDFKKNATETISRIHLEDFEVDNTLGLTENNYITGGMGYAGTMVEQEKAKLTFADFIGTSDGKADGNGLHI SYTNGSVEDFASIFAAQYEAMKASGALGEDNNLTQQEFLEQFYRQGEFTHDSSNPFLNFVSSVLDITIIKPVIEACTGED LITGEDLTDMERGLKVVFAMVDLVTLGGAIAATKFSEMGLKEGLKAFGKTALIDFAGNTAACGVGALGETFDWPVPITMM LSLAAGITVSISGNKLLFKNADGIEIGSKTLSDAEVKKIGDVLDEGLDINFVSEDLNNILKNKGVTLEEFNALRLRDVST LSEEERVMLRKIGEQLTEDERLKLIGKSTWDKIVNSISSEDRKKIQGWKFTPSDELYIKYKEIYDNPKYYNQKTGEIHWP PNDGFKEGSKCKKVIPADTLFKRYGANNGEFLGNSVDSFESRALAPHSEGAEIHYYQLVEDYEFTTGKAAPWFGSEGGAQ QYVVYKPDGSKYTIKELEETGIIEDVTELVNKGEIVIE
Specific function: Unknown
COG id: COG5444
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66586; Mature: 66586
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEEIKKAYMDWSEKGVSYLNCMYVYDTMMDVDEALQTCDTILDEIDLGIDYTSREKDID CCHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH RLLEGHGTLHRYIDVLNCYVDDKLDQPLKKDFKKNATETISRIHLEDFEVDNTLGLTENN HHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC YITGGMGYAGTMVEQEKAKLTFADFIGTSDGKADGNGLHISYTNGSVEDFASIFAAQYEA EEECCCCCCCCHHHHHHHHEEHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH MKASGALGEDNNLTQQEFLEQFYRQGEFTHDSSNPFLNFVSSVLDITIIKPVIEACTGED HHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC LITGEDLTDMERGLKVVFAMVDLVTLGGAIAATKFSEMGLKEGLKAFGKTALIDFAGNTA CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC ACGVGALGETFDWPVPITMMLSLAAGITVSISGNKLLFKNADGIEIGSKTLSDAEVKKIG CCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHH DVLDEGLDINFVSEDLNNILKNKGVTLEEFNALRLRDVSTLSEEERVMLRKIGEQLTEDE HHHHCCCCEEEHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCH RLKLIGKSTWDKIVNSISSEDRKKIQGWKFTPSDELYIKYKEIYDNPKYYNQKTGEIHWP HHHHHCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEEEEHHHCCCCCCCCCCCCEEECC PNDGFKEGSKCKKVIPADTLFKRYGANNGEFLGNSVDSFESRALAPHSEGAEIHYYQLVE CCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEEH DYEFTTGKAAPWFGSEGGAQQYVVYKPDGSKYTIKELEETGIIEDVTELVNKGEIVIE HCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEHHHHHHHCCCHHHHHHHHCCCCEEEC >Mature Secondary Structure MEEEIKKAYMDWSEKGVSYLNCMYVYDTMMDVDEALQTCDTILDEIDLGIDYTSREKDID CCHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH RLLEGHGTLHRYIDVLNCYVDDKLDQPLKKDFKKNATETISRIHLEDFEVDNTLGLTENN HHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC YITGGMGYAGTMVEQEKAKLTFADFIGTSDGKADGNGLHISYTNGSVEDFASIFAAQYEA EEECCCCCCCCHHHHHHHHEEHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH MKASGALGEDNNLTQQEFLEQFYRQGEFTHDSSNPFLNFVSSVLDITIIKPVIEACTGED HHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC LITGEDLTDMERGLKVVFAMVDLVTLGGAIAATKFSEMGLKEGLKAFGKTALIDFAGNTA CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC ACGVGALGETFDWPVPITMMLSLAAGITVSISGNKLLFKNADGIEIGSKTLSDAEVKKIG CCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHH DVLDEGLDINFVSEDLNNILKNKGVTLEEFNALRLRDVSTLSEEERVMLRKIGEQLTEDE HHHHCCCCEEEHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCH RLKLIGKSTWDKIVNSISSEDRKKIQGWKFTPSDELYIKYKEIYDNPKYYNQKTGEIHWP HHHHHCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEEEEHHHCCCCCCCCCCCCEEECC PNDGFKEGSKCKKVIPADTLFKRYGANNGEFLGNSVDSFESRALAPHSEGAEIHYYQLVE CCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEEH DYEFTTGKAAPWFGSEGGAQQYVVYKPDGSKYTIKELEETGIIEDVTELVNKGEIVIE HCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEHHHHHHHCCCHHHHHHHHCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA