| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238922989
Identifier: 238922989
GI number: 238922989
Start: 536919
End: 537845
Strand: Direct
Name: 238922989
Synonym: EUBREC_0578
Alternate gene names: NA
Gene position: 536919-537845 (Clockwise)
Preceding gene: 238922988
Following gene: 238922990
Centisome position: 15.56
GC content: 38.83
Gene sequence:
>927_bases ATGCAACGCAGACGGAAAGGAAAATTTATTATGAAGAAAGCAATATCAGTTCTTATGGTAGCGGCATGTATGTTATGTAT GGTGACAGCATGTGAAAAAAAGGATAAAAAGGAAAATGACACATCAGCAGTTCAGGCAACAGAAACAGATTGCACGGCAG CAGAGCTTGTAACCACAGAGCCGGAAGGTGAAATCACGATATCAGAGATGATAGATCAAAGGATTAAAGAGGAAGGAAAG ATAATGATATATAGGATGCGTTTTGGCCCGTCAAAGACTCCTTTGGAAATAACAGAGGATTTAAACGTAAATATTATATC GTATGATGGGAAAGAACTTATCGGTTATAGAAATAGCTCTAATCGCAGAGGGGAGACCAGACTTGGTGACATAATACATA ATAAAGTGGATTATTCAACATATAATATAGGCGCATATGGTGGAAACTGGAAAAGATATGATAATGAGTTTGGAGATGAA AAATATGTGGAAGAAGAAGGCTATGTACAGCGCGAAATCACTACAGATGATTCGGGAAATAATGCCCAGCTGGAGACACT GTATTCGTATTCAAAGGGAACTCTTTATAGCAGGGATGCTGGAAGTAAAGAATGGAACCAGACAGAGAAAGAGGACAGTC TAGATATAGTATCATTTGGAACATTTGAGAGGATAAAGCTGGATGGAAAAACATACATGACATTCTGCGTAAGAGATAAT TTGAATCTGATAGAGTATGATATTATTCCGGACAATAAATTCACAGAGAACAAGACAGTTGTATATGACACTCCGGGAAC AGAGAAAACCACAGTCAATACAGTGGATTACCTCAAAGAATACCAGGCGGTTCCCAAAGAAGAACTGGAGCAGATGATAG TTTTCCCGGGCAGTAAAAAAGCGGAAAGCTCACAGGCTGCAGATTAA
Upstream 100 bases:
>100_bases TCAGAGAGAGGATGACGAAAGTTATAAGGATTTATGTCGAAGAGTGTCAAAATATATTGATTACGTTATAGAAAATTGAG ATAACAATAAATAGGCATGA
Downstream 100 bases:
>100_bases ATACGGTATGATTGCATATGCCAACAAGTTTGCAGAGCTCAGACCTTTATTTGTAAAAGTTTATCAGAACAAGAGGAGAA GCAATATGGCAAGTCTGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MQRRRKGKFIMKKAISVLMVAACMLCMVTACEKKDKKENDTSAVQATETDCTAAELVTTEPEGEITISEMIDQRIKEEGK IMIYRMRFGPSKTPLEITEDLNVNIISYDGKELIGYRNSSNRRGETRLGDIIHNKVDYSTYNIGAYGGNWKRYDNEFGDE KYVEEEGYVQREITTDDSGNNAQLETLYSYSKGTLYSRDAGSKEWNQTEKEDSLDIVSFGTFERIKLDGKTYMTFCVRDN LNLIEYDIIPDNKFTENKTVVYDTPGTEKTTVNTVDYLKEYQAVPKEELEQMIVFPGSKKAESSQAAD
Sequences:
>Translated_308_residues MQRRRKGKFIMKKAISVLMVAACMLCMVTACEKKDKKENDTSAVQATETDCTAAELVTTEPEGEITISEMIDQRIKEEGK IMIYRMRFGPSKTPLEITEDLNVNIISYDGKELIGYRNSSNRRGETRLGDIIHNKVDYSTYNIGAYGGNWKRYDNEFGDE KYVEEEGYVQREITTDDSGNNAQLETLYSYSKGTLYSRDAGSKEWNQTEKEDSLDIVSFGTFERIKLDGKTYMTFCVRDN LNLIEYDIIPDNKFTENKTVVYDTPGTEKTTVNTVDYLKEYQAVPKEELEQMIVFPGSKKAESSQAAD >Mature_308_residues MQRRRKGKFIMKKAISVLMVAACMLCMVTACEKKDKKENDTSAVQATETDCTAAELVTTEPEGEITISEMIDQRIKEEGK IMIYRMRFGPSKTPLEITEDLNVNIISYDGKELIGYRNSSNRRGETRLGDIIHNKVDYSTYNIGAYGGNWKRYDNEFGDE KYVEEEGYVQREITTDDSGNNAQLETLYSYSKGTLYSRDAGSKEWNQTEKEDSLDIVSFGTFERIKLDGKTYMTFCVRDN LNLIEYDIIPDNKFTENKTVVYDTPGTEKTTVNTVDYLKEYQAVPKEELEQMIVFPGSKKAESSQAAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35166; Mature: 35166
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRRKGKFIMKKAISVLMVAACMLCMVTACEKKDKKENDTSAVQATETDCTAAELVTTE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEEEC PEGEITISEMIDQRIKEEGKIMIYRMRFGPSKTPLEITEDLNVNIISYDGKELIGYRNSS CCCCEEHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCEEEEEECCCEEEEECCCC NRRGETRLGDIIHNKVDYSTYNIGAYGGNWKRYDNEFGDEKYVEEEGYVQREITTDDSGN CCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHCCCCCCCCHHCCCCCCEEEEEECCCCCC NAQLETLYSYSKGTLYSRDAGSKEWNQTEKEDSLDIVSFGTFERIKLDGKTYMTFCVRDN CCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCEEEEEEEECC LNLIEYDIIPDNKFTENKTVVYDTPGTEKTTVNTVDYLKEYQAVPKEELEQMIVFPGSKK CCEEEEEECCCCCCCCCCEEEEECCCCCCEEHHHHHHHHHHHCCCHHHHHHEEECCCCCC AESSQAAD CCCCCCCC >Mature Secondary Structure MQRRRKGKFIMKKAISVLMVAACMLCMVTACEKKDKKENDTSAVQATETDCTAAELVTTE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEEEC PEGEITISEMIDQRIKEEGKIMIYRMRFGPSKTPLEITEDLNVNIISYDGKELIGYRNSS CCCCEEHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCEEEEEECCCEEEEECCCC NRRGETRLGDIIHNKVDYSTYNIGAYGGNWKRYDNEFGDEKYVEEEGYVQREITTDDSGN CCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHCCCCCCCCHHCCCCCCEEEEEECCCCCC NAQLETLYSYSKGTLYSRDAGSKEWNQTEKEDSLDIVSFGTFERIKLDGKTYMTFCVRDN CCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCEEEEEEEECC LNLIEYDIIPDNKFTENKTVVYDTPGTEKTTVNTVDYLKEYQAVPKEELEQMIVFPGSKK CCEEEEEECCCCCCCCCCEEEEECCCCCCEEHHHHHHHHHHHCCCHHHHHHEEECCCCCC AESSQAAD CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA