| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is tap [C]
Identifier: 238922922
GI number: 238922922
Start: 471896
End: 473608
Strand: Direct
Name: tap [C]
Synonym: EUBREC_0510
Alternate gene names: 238922922
Gene position: 471896-473608 (Clockwise)
Preceding gene: 238922921
Following gene: 238922923
Centisome position: 13.68
GC content: 42.09
Gene sequence:
>1713_bases ATGTCTTCAAAAAAAGATGCGATGAAAAAGAAATTGGAAAACATGCATTTGGGTGAAAGGATTAACTATGGCTATAGAAT GGTTATTACCATGATGCTTATTTCGGGACTGCTTTCGATTGCGGTCATTGGTGTGTTGTTTTTCAATATGTTAAACTATG TAAACAAGGTAAATGCTGCCGATCAGGCGGTTAAGACATGTAGAATAAATGTAAATGCAGCGGCTAGAAATGTAAGAGAG ATGGCACTTAATCCTGACAAATCAACATATGACGACTATGAGCAGGGCGCAAAAGAAAAGCTTGAAGATGTTGATGTGCA GTTAAAAACAATAAAAAAATCAGGTATCGTTCCTGAGAATCAGTATAATGAATATTCAAAGGCTCTTTCTGACTGGGCGA ATATCGGATACTCAATCATGGATAAGATTAAAGCCGGACAGAAGGATGAGGCTGTTGATCAGATTATCAATGAGTGTACA CCAAAGTTAAATAAAACAGTTGAGCTTGCAAAGGAAATCAACAAGCTGACTGACGAAAGAAGCCATCAGGCAGTTGTAAG GACATATGTATGTGCTGCAGTCGGACTCATAGTCATCATTATCTGTCTGATATGTGCATGGCAGTTGACAAAGAGAACAG GAAAGATCGTGCTTGATACAATCCTTGAGCCATTACATGCAATCGAGGAAGTGGCAAAGGAGCTGACAGAAGGAAATCTT CACAGCACACTTGATTACCGTTCAGAGGATGAAATCGGTAGATTGGCACACAGCATGAGAAAGTCTATCCGTATTCTCGG CTCATATGTGGATGATATAGACAGGTCGATGAAGCTCTTTGCGGACGGACATTTTGATGCACAGCCGGAAGTAGAGTGGA GAGGCGATTTTGTAGGTATTTTACATTCATTTATGGAATTTGAAAAAAGTATGGCAGTCACCATAAAGGGAATCCAGAAT GTATCAAGCGAGGTTTCAAGTGCGGCAGAGCAGGTAGCTGCAAGCTCAAATGACCTTGCAGACGGTGCAACCAATCAGGC TGCGGTTGTAGAGGAACTGACAGCGACGGTTGAGGGAGTTTCAGAGCAGGTGGAGCAGAATTCAAAGAGTGCAAAGGAAA TCAGTGGAAGAGTGGATGAGCTTGGAGGTGCAATTTGGGAAAGCAATGGAAAGATGCAGGAGATGGTTACATCTATGCAT GAAATAAACGAAGCCTCTAAACAGATAGATCAGATTATATCAACCATTAATGAGATTGCATCACAGACCAACCTGCTTGC ATTAAACGCTTCTATTGAGGCAGCAAGAGCAGGGGAGGCAGGAAAAGGCTTTGCGGTTGTGGCAAATCAGGTAAATATGC TTGCCGATCAAAGTGCACAGGCTGCAAAGGAATCAGCTGCGCTTATAGAGACATCTGTGCAGGCTGTTGAAAAAGGCATG AATATTGCAGAGCAGACAGCTTCACAGCTTGAAGAAGTAGCAGAGAACTCTAAGGTGATTACAAAAGAGGTGACTAATAT AGCTGATACACTGGAGACCCAGACCAGTGAGATCAAGCAGATTAACGAAGGAATTGAGCAGATCAATGATGTTGTACAGA CCAATTCAGCAACATCACAGGAGTGTGCGGCTGCGAGCCAGCAGATGAGCAGTGAATCAGAAAATCTGAGTGAAATGATA GCAAAATTCAAAATCTCAGACATTGAAGAGTAA
Upstream 100 bases:
>100_bases GTCTGATGAATTTAGACTTGAGTATAAATGCCCTTGAGTATAAATAATAATATAATTAAATGGTCAAAAGGTATCATAAG ATAGGAGGAAATAACAAACT
Downstream 100 bases:
>100_bases TATAATAGAAGGTGAAATTTAATGAGGGCTTTTGATGCATATAAAATACTTGACGAGCAGGAGGCAGGAAGTCTGATAGA CTTAATTGCACCTTGTATGG
Product: putative methyl-accepting chemotaxis protein (MCP)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 570; Mature: 569
Protein sequence:
>570_residues MSSKKDAMKKKLENMHLGERINYGYRMVITMMLISGLLSIAVIGVLFFNMLNYVNKVNAADQAVKTCRINVNAAARNVRE MALNPDKSTYDDYEQGAKEKLEDVDVQLKTIKKSGIVPENQYNEYSKALSDWANIGYSIMDKIKAGQKDEAVDQIINECT PKLNKTVELAKEINKLTDERSHQAVVRTYVCAAVGLIVIIICLICAWQLTKRTGKIVLDTILEPLHAIEEVAKELTEGNL HSTLDYRSEDEIGRLAHSMRKSIRILGSYVDDIDRSMKLFADGHFDAQPEVEWRGDFVGILHSFMEFEKSMAVTIKGIQN VSSEVSSAAEQVAASSNDLADGATNQAAVVEELTATVEGVSEQVEQNSKSAKEISGRVDELGGAIWESNGKMQEMVTSMH EINEASKQIDQIISTINEIASQTNLLALNASIEAARAGEAGKGFAVVANQVNMLADQSAQAAKESAALIETSVQAVEKGM NIAEQTASQLEEVAENSKVITKEVTNIADTLETQTSEIKQINEGIEQINDVVQTNSATSQECAAASQQMSSESENLSEMI AKFKISDIEE
Sequences:
>Translated_570_residues MSSKKDAMKKKLENMHLGERINYGYRMVITMMLISGLLSIAVIGVLFFNMLNYVNKVNAADQAVKTCRINVNAAARNVRE MALNPDKSTYDDYEQGAKEKLEDVDVQLKTIKKSGIVPENQYNEYSKALSDWANIGYSIMDKIKAGQKDEAVDQIINECT PKLNKTVELAKEINKLTDERSHQAVVRTYVCAAVGLIVIIICLICAWQLTKRTGKIVLDTILEPLHAIEEVAKELTEGNL HSTLDYRSEDEIGRLAHSMRKSIRILGSYVDDIDRSMKLFADGHFDAQPEVEWRGDFVGILHSFMEFEKSMAVTIKGIQN VSSEVSSAAEQVAASSNDLADGATNQAAVVEELTATVEGVSEQVEQNSKSAKEISGRVDELGGAIWESNGKMQEMVTSMH EINEASKQIDQIISTINEIASQTNLLALNASIEAARAGEAGKGFAVVANQVNMLADQSAQAAKESAALIETSVQAVEKGM NIAEQTASQLEEVAENSKVITKEVTNIADTLETQTSEIKQINEGIEQINDVVQTNSATSQECAAASQQMSSESENLSEMI AKFKISDIEE >Mature_569_residues SSKKDAMKKKLENMHLGERINYGYRMVITMMLISGLLSIAVIGVLFFNMLNYVNKVNAADQAVKTCRINVNAAARNVREM ALNPDKSTYDDYEQGAKEKLEDVDVQLKTIKKSGIVPENQYNEYSKALSDWANIGYSIMDKIKAGQKDEAVDQIINECTP KLNKTVELAKEINKLTDERSHQAVVRTYVCAAVGLIVIIICLICAWQLTKRTGKIVLDTILEPLHAIEEVAKELTEGNLH STLDYRSEDEIGRLAHSMRKSIRILGSYVDDIDRSMKLFADGHFDAQPEVEWRGDFVGILHSFMEFEKSMAVTIKGIQNV SSEVSSAAEQVAASSNDLADGATNQAAVVEELTATVEGVSEQVEQNSKSAKEISGRVDELGGAIWESNGKMQEMVTSMHE INEASKQIDQIISTINEIASQTNLLALNASIEAARAGEAGKGFAVVANQVNMLADQSAQAAKESAALIETSVQAVEKGMN IAEQTASQLEEVAENSKVITKEVTNIADTLETQTSEIKQINEGIEQINDVVQTNSATSQECAAASQQMSSESENLSEMIA KFKISDIEE
Specific function: May bind attractants or detect changes in the extracellular concentration of soluble sugars [H]
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
Organism=Escherichia coli, GI1788194, Length=309, Percent_Identity=32.0388349514563, Blast_Score=147, Evalue=2e-36, Organism=Escherichia coli, GI1787690, Length=423, Percent_Identity=27.4231678486998, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI1788195, Length=304, Percent_Identity=32.2368421052632, Blast_Score=136, Evalue=3e-33, Organism=Escherichia coli, GI2367378, Length=310, Percent_Identity=32.9032258064516, Blast_Score=134, Evalue=1e-32, Organism=Escherichia coli, GI1789453, Length=246, Percent_Identity=30.8943089430894, Blast_Score=110, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004090 - InterPro: IPR004089 - InterPro: IPR003660 [H]
Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]
EC number: NA
Molecular weight: Translated: 62449; Mature: 62318
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKKDAMKKKLENMHLGERINYGYRMVITMMLISGLLSIAVIGVLFFNMLNYVNKVNAA CCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH DQAVKTCRINVNAAARNVREMALNPDKSTYDDYEQGAKEKLEDVDVQLKTIKKSGIVPEN HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QYNEYSKALSDWANIGYSIMDKIKAGQKDEAVDQIINECTPKLNKTVELAKEINKLTDER HHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH SHQAVVRTYVCAAVGLIVIIICLICAWQLTKRTGKIVLDTILEPLHAIEEVAKELTEGNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC HSTLDYRSEDEIGRLAHSMRKSIRILGSYVDDIDRSMKLFADGHFDAQPEVEWRGDFVGI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH LHSFMEFEKSMAVTIKGIQNVSSEVSSAAEQVAASSNDLADGATNQAAVVEELTATVEGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH SEQVEQNSKSAKEISGRVDELGGAIWESNGKMQEMVTSMHEINEASKQIDQIISTINEIA HHHHHHCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQTNLLALNASIEAARAGEAGKGFAVVANQVNMLADQSAQAAKESAALIETSVQAVEKGM HHCCEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NIAEQTASQLEEVAENSKVITKEVTNIADTLETQTSEIKQINEGIEQINDVVQTNSATSQ CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ECAAASQQMSSESENLSEMIAKFKISDIEE HHHHHHHHHCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SSKKDAMKKKLENMHLGERINYGYRMVITMMLISGLLSIAVIGVLFFNMLNYVNKVNAA CCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH DQAVKTCRINVNAAARNVREMALNPDKSTYDDYEQGAKEKLEDVDVQLKTIKKSGIVPEN HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QYNEYSKALSDWANIGYSIMDKIKAGQKDEAVDQIINECTPKLNKTVELAKEINKLTDER HHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH SHQAVVRTYVCAAVGLIVIIICLICAWQLTKRTGKIVLDTILEPLHAIEEVAKELTEGNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC HSTLDYRSEDEIGRLAHSMRKSIRILGSYVDDIDRSMKLFADGHFDAQPEVEWRGDFVGI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH LHSFMEFEKSMAVTIKGIQNVSSEVSSAAEQVAASSNDLADGATNQAAVVEELTATVEGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH SEQVEQNSKSAKEISGRVDELGGAIWESNGKMQEMVTSMHEINEASKQIDQIISTINEIA HHHHHHCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQTNLLALNASIEAARAGEAGKGFAVVANQVNMLADQSAQAAKESAALIETSVQAVEKGM HHCCEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NIAEQTASQLEEVAENSKVITKEVTNIADTLETQTSEIKQINEGIEQINDVVQTNSATSQ CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ECAAASQQMSSESENLSEMIAKFKISDIEE HHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8436949 [H]