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The map label for this gene is pqqE [H]

Identifier: 238922810

GI number: 238922810

Start: 362013

End: 363023

Strand: Direct

Name: pqqE [H]

Synonym: EUBREC_0398

Alternate gene names: 238922810

Gene position: 362013-363023 (Clockwise)

Preceding gene: 238922809

Following gene: 238922811

Centisome position: 10.49

GC content: 30.86

Gene sequence:

>1011_bases
ATGAATAAATTAACTACAGCTGTATGGGAAATAACAATGGGTTGTAATATGCGTTGTAAACATTGCGGTTCAAGTTGTGC
AGAAGCGCTACCCGATGAGTTGAATACATCAGAAGCTCTTGAGGTGTGTGACCAATTAAAAGATTTGGGATTAAAAGTTA
TTACATTATCTGGAGGGGAACCTACGACACGTAGTGACTGGCATATTATTGCGAAAAGATTAGTAGATAATGGCATAATA
ACAAGTATTATTACAAATGGTTGGTTGATTGATGAAAACTTTATTCATAATGCGATAACATCAGGAATTAGAAGTGTCTG
TTTAAGTATTGATGGTCTTGAAAAAACTCACGATTTTATACGGAGATCGGGATCATTCAATAAAAGTATTAAAGCATTGA
AAGAATTAAGAAAAAATAATATTTCGACATCAGTAATAACTTCAATAAATAAAGAAAATATATGTGAATTGGAAGAACTA
TATCAATTATTAATTGTTTTGGCAGATTGCATAGGTTATTATAGCAATAAAGATATAAAAGTAAATGAGAATTTTCTTAA
TGATAATTGGTCTTGGACAGGTTGTGGAGCAGGAAAGCATGTAATTGGTATTCTGCATAATGGAGATATTGTTGCTTGTA
CTTCTATTAGAGATAAAACATTAGTAGCGGGAAATATTCGTGAAAAATCTTTAAAGTCGATTTGGGAAAGTCCGGACTCT
TTTAAGTGGAATAGAAATTTTGATAGTAGTAAGTTAAAAGGATTTTGCAGAGAATGTCGTTATACAGAACGATGCTTAGG
AGGATGTAGTAATAGTCGTTATTGCATTAACGGCTCATTTGAAAGTGAAAATAGATACTGTGCATATAATGTTGAAATGA
AAAAATGGAAAAAATATTTGGAATCACTTAATGATATATCAGAAATTGATAATGTTATAGAAAAAGCAGCGGCTTTAAAA
CATCAGGATCTTTATAAGATAGCTTGCGAAATTAAACAATCTAAATTATGA

Upstream 100 bases:

>100_bases
AACAGGTGTGAGAATGTAGTTTGTAGAAAAGACTTGCTCTATGTAAAAAGAAATATAGAGTAGGTCTTTTTTATTTAAAA
AGGATTATAGGAGAGAATAT

Downstream 100 bases:

>100_bases
TTAGAGAGGTAACAAATATGAATAAACATGAGTTATATCATAACCACAATTATGTTTATCTGCTGACTTCTAATATTATT
AACCGCTGTGGTGATTCATT

Product: pyrroloquinoline quinone biosynthesis protein PqqE

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MNKLTTAVWEITMGCNMRCKHCGSSCAEALPDELNTSEALEVCDQLKDLGLKVITLSGGEPTTRSDWHIIAKRLVDNGII
TSIITNGWLIDENFIHNAITSGIRSVCLSIDGLEKTHDFIRRSGSFNKSIKALKELRKNNISTSVITSINKENICELEEL
YQLLIVLADCIGYYSNKDIKVNENFLNDNWSWTGCGAGKHVIGILHNGDIVACTSIRDKTLVAGNIREKSLKSIWESPDS
FKWNRNFDSSKLKGFCRECRYTERCLGGCSNSRYCINGSFESENRYCAYNVEMKKWKKYLESLNDISEIDNVIEKAAALK
HQDLYKIACEIKQSKL

Sequences:

>Translated_336_residues
MNKLTTAVWEITMGCNMRCKHCGSSCAEALPDELNTSEALEVCDQLKDLGLKVITLSGGEPTTRSDWHIIAKRLVDNGII
TSIITNGWLIDENFIHNAITSGIRSVCLSIDGLEKTHDFIRRSGSFNKSIKALKELRKNNISTSVITSINKENICELEEL
YQLLIVLADCIGYYSNKDIKVNENFLNDNWSWTGCGAGKHVIGILHNGDIVACTSIRDKTLVAGNIREKSLKSIWESPDS
FKWNRNFDSSKLKGFCRECRYTERCLGGCSNSRYCINGSFESENRYCAYNVEMKKWKKYLESLNDISEIDNVIEKAAALK
HQDLYKIACEIKQSKL
>Mature_336_residues
MNKLTTAVWEITMGCNMRCKHCGSSCAEALPDELNTSEALEVCDQLKDLGLKVITLSGGEPTTRSDWHIIAKRLVDNGII
TSIITNGWLIDENFIHNAITSGIRSVCLSIDGLEKTHDFIRRSGSFNKSIKALKELRKNNISTSVITSINKENICELEEL
YQLLIVLADCIGYYSNKDIKVNENFLNDNWSWTGCGAGKHVIGILHNGDIVACTSIRDKTLVAGNIREKSLKSIWESPDS
FKWNRNFDSSKLKGFCRECRYTERCLGGCSNSRYCINGSFESENRYCAYNVEMKKWKKYLESLNDISEIDNVIEKAAALK
HQDLYKIACEIKQSKL

Specific function: Potential Positive Factor For The Regulation Of Arylsulfatase. [C]

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 37921; Mature: 37921

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLTTAVWEITMGCNMRCKHCGSSCAEALPDELNTSEALEVCDQLKDLGLKVITLSGGE
CCCHHHHHHHHHCCCCCHHHHCCHHHHHHCCHHCCHHHHHHHHHHHHHCCEEEEEECCCC
PTTRSDWHIIAKRLVDNGIITSIITNGWLIDENFIHNAITSGIRSVCLSIDGLEKTHDFI
CCCCCHHHHHHHHHHCCCHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RRSGSFNKSIKALKELRKNNISTSVITSINKENICELEELYQLLIVLADCIGYYSNKDIK
HHCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE
VNENFLNDNWSWTGCGAGKHVIGILHNGDIVACTSIRDKTLVAGNIREKSLKSIWESPDS
EECCCCCCCCCEECCCCCCEEEEEEECCCEEEEECCCCCEEEECCCHHHHHHHHHCCCCC
FKWNRNFDSSKLKGFCRECRYTERCLGGCSNSRYCINGSFESENRYCAYNVEMKKWKKYL
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEECCHHHHHHHH
ESLNDISEIDNVIEKAAALKHQDLYKIACEIKQSKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKLTTAVWEITMGCNMRCKHCGSSCAEALPDELNTSEALEVCDQLKDLGLKVITLSGGE
CCCHHHHHHHHHCCCCCHHHHCCHHHHHHCCHHCCHHHHHHHHHHHHHCCEEEEEECCCC
PTTRSDWHIIAKRLVDNGIITSIITNGWLIDENFIHNAITSGIRSVCLSIDGLEKTHDFI
CCCCCHHHHHHHHHHCCCHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RRSGSFNKSIKALKELRKNNISTSVITSINKENICELEELYQLLIVLADCIGYYSNKDIK
HHCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE
VNENFLNDNWSWTGCGAGKHVIGILHNGDIVACTSIRDKTLVAGNIREKSLKSIWESPDS
EECCCCCCCCCEECCCCCCEEEEEEECCCEEEEECCCCCEEEECCCHHHHHHHHHCCCCC
FKWNRNFDSSKLKGFCRECRYTERCLGGCSNSRYCINGSFESENRYCAYNVEMKKWKKYL
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEECCHHHHHHHH
ESLNDISEIDNVIEKAAALKHQDLYKIACEIKQSKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA