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The map label for this gene is yoeB [H]

Identifier: 238922741

GI number: 238922741

Start: 291639

End: 291899

Strand: Direct

Name: yoeB [H]

Synonym: EUBREC_0317

Alternate gene names: 238922741

Gene position: 291639-291899 (Clockwise)

Preceding gene: 238922740

Following gene: 238922742

Centisome position: 8.45

GC content: 36.78

Gene sequence:

>261_bases
ATGAATGTTGTATTTACTCCGACTGCATGGCAGCAGTACACAGACTGGCAGAAGGAAGATAAAAAGATCGTAAAGCGGAT
TAACGAGCTTATAAAGAGTATAGATCGTGATGGACTATTAGAAGGAATCGGTAAGCCTGAACCGTTGAAGTATAGGAAAG
TATGTAGCAGACGGATAACGGACGAACACAGACTTACATATAACTTTGATAGTAACCAAAATCTCATAATATATTCCTGT
AAATTTCATTATGAAGATTAG

Upstream 100 bases:

>100_bases
GAAATGCTGAATACCTTGCTATGCTGGATAAATCTATGGCTGAAGCCGAAGCAGGTGGTTTTATTACAAAGACAGTGGAT
GAGTTAGGAGCATACGAATA

Downstream 100 bases:

>100_bases
CACCGCATTAGGTGACTTTCTTTTTACTCAATAAGCTCATTATCTAAGAGAATATTATAACAGGGCATAAAAATAAAATA
TTAAAAACCCCATAAATTCC

Product: hypothetical protein

Products: NA

Alternate protein names: Endoribonuclease YoeB; Putative mRNA interferase YoeB [H]

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MNVVFTPTAWQQYTDWQKEDKKIVKRINELIKSIDRDGLLEGIGKPEPLKYRKVCSRRITDEHRLTYNFDSNQNLIIYSC
KFHYED

Sequences:

>Translated_86_residues
MNVVFTPTAWQQYTDWQKEDKKIVKRINELIKSIDRDGLLEGIGKPEPLKYRKVCSRRITDEHRLTYNFDSNQNLIIYSC
KFHYED
>Mature_86_residues
MNVVFTPTAWQQYTDWQKEDKKIVKRINELIKSIDRDGLLEGIGKPEPLKYRKVCSRRITDEHRLTYNFDSNQNLIIYSC
KFHYED

Specific function: Part of a toxin-antitoxin (TA) module. Has RNase activity and preferentially cleaves at the 3'-end of purine ribonucleotides [H]

COG id: COG4115

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YoeB family [H]

Homologues:

Organism=Escherichia coli, GI87082025, Length=86, Percent_Identity=47.6744186046512, Blast_Score=79, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10382; Mature: 10382

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVVFTPTAWQQYTDWQKEDKKIVKRINELIKSIDRDGLLEGIGKPEPLKYRKVCSRRIT
CCEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHCC
DEHRLTYNFDSNQNLIIYSCKFHYED
CCCEEEEEECCCCCEEEEEEEEEECC
>Mature Secondary Structure
MNVVFTPTAWQQYTDWQKEDKKIVKRINELIKSIDRDGLLEGIGKPEPLKYRKVCSRRIT
CCEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHCC
DEHRLTYNFDSNQNLIIYSCKFHYED
CCCEEEEEECCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]