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The map label for this gene is ycjN [C]

Identifier: 238922708

GI number: 238922708

Start: 267031

End: 268332

Strand: Direct

Name: ycjN [C]

Synonym: EUBREC_0283

Alternate gene names: 238922708

Gene position: 267031-268332 (Clockwise)

Preceding gene: 238922707

Following gene: 238922709

Centisome position: 7.74

GC content: 38.25

Gene sequence:

>1302_bases
ATGAGGAAAAAGATAATTAGTGCTATGTTGGCATTGTGTATGGCTGGTAGCTTATTAACAGGATGTGGGACGTCTGCTGA
TGCAGAAAAGAAAAGTAAAGACAGCGGGGACGTTACTACCGTAAAATGGTTTACGTCAAGACCGGTTGACGGAGCGATTG
ATCAGGTAATGCATGAAATCGCAGATGAATACAGTGAGAAGATGGGTGGAAAATGGAAGATTGAATTTGAAACTACAGCT
GATAGACCATCATATTTGCAGAAACTGAAAACATTGATTGCAGGTGGAAATATGCCGGATATCATTGATATTGACGCAGA
TCCGTATTGCCAGGAACTGGTTGATGCAGGAATGCTTGTAGATGTAAAAAAATTCCTGAAGGATAATGGTAAATATGATA
GTTTTTATCCGACTGCTCTGAAATATCAGGAATTTACAGACGGATCCATGTATACACTTCCATTGGAATATCATGTTGAA
ATGACCTGGTATAATAAGGAAATTTTTGACAAATATGGTTTATCAGTACCGAAAACTATGGATGAGTGGCTGGATGTATG
TAAAACGTTGAAGGAAAATGGAGTAACACCAATTTCAGTAGATGGTGTTGACAGATGGCCGGTACAGAGATATCTGGCAA
TGATGCCGTTTAGAGAATCTGGTAACGATTATATTATCAATCTTCGTGATGGAAAAGAAAAAATGGCCGGAGATGAAGGT
AAAGAGGCAGCAACATTCATGAAGAATATTGGACAGTATTTTAATGATGGATTTGCAGCAACGGATTATGCAACTGCACA
GTCGATGTTCCTGGATGGAAAATCCGCAATGTACTACATTGGTGATTGGGAGATTGCAGCTATGCAGGACGCTTATAAAG
CTGGAAAAATAGATTATTTCTATCTTCCAACTATCGAAAACGGAAAAACAGATGCAAGTGAATTTTGCGTAAACTCTGGA
ATCGGAATGGCATTCAATGCAAAAACATTTGATGCAAAAACCAAAGACTTTATACTTTACGTACTGGATAACTATGGTGA
AAAATATGCAGCAAAACAGCAGATGTCACCAATCAAAACAGAACTTCCGTCAGATGTAGAATTCTCAGATCTGTATCTTA
GAATTCGTGATGATATGGATAAAACAGGTGCGCAGTTCCTGAAACCATGGGATACATATCTGGATGCAGATACTAATACA
ACTATGCAGGATAATTTATTGCTTCTTGCATCCGGGGATATGTCAGTTGATGATTTCTGCAAACTGATAGATGATTCTAT
TGCAACCAACGCGAAAAACTAA

Upstream 100 bases:

>100_bases
TCGACCAGGATGTATAATCATAAAGATGGTTATGCAGGTATTTATGTAGTACAAGGCGATGTAAAATTAATTCAATATAA
AGAAAAAAGGAGCGAGTAAT

Downstream 100 bases:

>100_bases
GGATGTTTGATGTCTGGGAGAAGACTCTCCCAGACATCCTGTATTTAAAACCATGGAGGGCAATATGGGCGTAATTAAGA
ACAGAAAATGGTTTTTTATA

Product: sugar ABC transporter (sugar-binding protein)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MRKKIISAMLALCMAGSLLTGCGTSADAEKKSKDSGDVTTVKWFTSRPVDGAIDQVMHEIADEYSEKMGGKWKIEFETTA
DRPSYLQKLKTLIAGGNMPDIIDIDADPYCQELVDAGMLVDVKKFLKDNGKYDSFYPTALKYQEFTDGSMYTLPLEYHVE
MTWYNKEIFDKYGLSVPKTMDEWLDVCKTLKENGVTPISVDGVDRWPVQRYLAMMPFRESGNDYIINLRDGKEKMAGDEG
KEAATFMKNIGQYFNDGFAATDYATAQSMFLDGKSAMYYIGDWEIAAMQDAYKAGKIDYFYLPTIENGKTDASEFCVNSG
IGMAFNAKTFDAKTKDFILYVLDNYGEKYAAKQQMSPIKTELPSDVEFSDLYLRIRDDMDKTGAQFLKPWDTYLDADTNT
TMQDNLLLLASGDMSVDDFCKLIDDSIATNAKN

Sequences:

>Translated_433_residues
MRKKIISAMLALCMAGSLLTGCGTSADAEKKSKDSGDVTTVKWFTSRPVDGAIDQVMHEIADEYSEKMGGKWKIEFETTA
DRPSYLQKLKTLIAGGNMPDIIDIDADPYCQELVDAGMLVDVKKFLKDNGKYDSFYPTALKYQEFTDGSMYTLPLEYHVE
MTWYNKEIFDKYGLSVPKTMDEWLDVCKTLKENGVTPISVDGVDRWPVQRYLAMMPFRESGNDYIINLRDGKEKMAGDEG
KEAATFMKNIGQYFNDGFAATDYATAQSMFLDGKSAMYYIGDWEIAAMQDAYKAGKIDYFYLPTIENGKTDASEFCVNSG
IGMAFNAKTFDAKTKDFILYVLDNYGEKYAAKQQMSPIKTELPSDVEFSDLYLRIRDDMDKTGAQFLKPWDTYLDADTNT
TMQDNLLLLASGDMSVDDFCKLIDDSIATNAKN
>Mature_433_residues
MRKKIISAMLALCMAGSLLTGCGTSADAEKKSKDSGDVTTVKWFTSRPVDGAIDQVMHEIADEYSEKMGGKWKIEFETTA
DRPSYLQKLKTLIAGGNMPDIIDIDADPYCQELVDAGMLVDVKKFLKDNGKYDSFYPTALKYQEFTDGSMYTLPLEYHVE
MTWYNKEIFDKYGLSVPKTMDEWLDVCKTLKENGVTPISVDGVDRWPVQRYLAMMPFRESGNDYIINLRDGKEKMAGDEG
KEAATFMKNIGQYFNDGFAATDYATAQSMFLDGKSAMYYIGDWEIAAMQDAYKAGKIDYFYLPTIENGKTDASEFCVNSG
IGMAFNAKTFDAKTKDFILYVLDNYGEKYAAKQQMSPIKTELPSDVEFSDLYLRIRDDMDKTGAQFLKPWDTYLDADTNT
TMQDNLLLLASGDMSVDDFCKLIDDSIATNAKN

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 48762; Mature: 48762

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKIISAMLALCMAGSLLTGCGTSADAEKKSKDSGDVTTVKWFTSRPVDGAIDQVMHEI
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHH
ADEYSEKMGGKWKIEFETTADRPSYLQKLKTLIAGGNMPDIIDIDADPYCQELVDAGMLV
HHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHCCHHH
DVKKFLKDNGKYDSFYPTALKYQEFTDGSMYTLPLEYHVEMTWYNKEIFDKYGLSVPKTM
HHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEEEEECHHHHHHHCCCCCHHH
DEWLDVCKTLKENGVTPISVDGVDRWPVQRYLAMMPFRESGNDYIINLRDGKEKMAGDEG
HHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCCCCEEEEEECCCHHHHCCCCC
KEAATFMKNIGQYFNDGFAATDYATAQSMFLDGKSAMYYIGDWEIAAMQDAYKAGKIDYF
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHEECCCCEEEEEECEEEEHHHHHHHCCCEEEE
YLPTIENGKTDASEFCVNSGIGMAFNAKTFDAKTKDFILYVLDNYGEKYAAKQQMSPIKT
ECCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHH
ELPSDVEFSDLYLRIRDDMDKTGAQFLKPWDTYLDADTNTTMQDNLLLLASGDMSVDDFC
CCCCCCCHHHEEEEECCCCCHHHHHHHCCHHHHCCCCCCCCCCCCEEEEECCCCCHHHHH
KLIDDSIATNAKN
HHHHHHHHCCCCC
>Mature Secondary Structure
MRKKIISAMLALCMAGSLLTGCGTSADAEKKSKDSGDVTTVKWFTSRPVDGAIDQVMHEI
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHH
ADEYSEKMGGKWKIEFETTADRPSYLQKLKTLIAGGNMPDIIDIDADPYCQELVDAGMLV
HHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHCCHHH
DVKKFLKDNGKYDSFYPTALKYQEFTDGSMYTLPLEYHVEMTWYNKEIFDKYGLSVPKTM
HHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEEEEECHHHHHHHCCCCCHHH
DEWLDVCKTLKENGVTPISVDGVDRWPVQRYLAMMPFRESGNDYIINLRDGKEKMAGDEG
HHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCCCCEEEEEECCCHHHHCCCCC
KEAATFMKNIGQYFNDGFAATDYATAQSMFLDGKSAMYYIGDWEIAAMQDAYKAGKIDYF
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHEECCCCEEEEEECEEEEHHHHHHHCCCEEEE
YLPTIENGKTDASEFCVNSGIGMAFNAKTFDAKTKDFILYVLDNYGEKYAAKQQMSPIKT
ECCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHH
ELPSDVEFSDLYLRIRDDMDKTGAQFLKPWDTYLDADTNTTMQDNLLLLASGDMSVDDFC
CCCCCCCHHHEEEEECCCCCHHHHHHHCCHHHHCCCCCCCCCCCCEEEEECCCCCHHHHH
KLIDDSIATNAKN
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]