| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238922707
Identifier: 238922707
GI number: 238922707
Start: 265575
End: 267029
Strand: Direct
Name: 238922707
Synonym: EUBREC_0282
Alternate gene names: NA
Gene position: 265575-267029 (Clockwise)
Preceding gene: 238922702
Following gene: 238922708
Centisome position: 7.7
GC content: 36.22
Gene sequence:
>1455_bases ATGGGGCGATTATTTTATAAACCAGAAAATGCCTGGGTTGGTGATTTGATTCCATATTATGAAAACGGAACCTATTATGG ATTTTATCTTCATGATCCAAGAATACGTGATAAAGAATATGCCGAAGATACTACATGGCATCTGATTGAGACCAAAGATT TTGTTAATCTGGATTATAAAGGTGAATCAATTGCAAGAGGTGGTATTCATGATGCCAACAAGAACGCATATACAGGATCG GTTATCAAATGTGAAAAAGATGGATTGTATCATGTTTTTTATACCGCTTATAATGAGGATTTTAAACTTCGCGGTAAAAC AATTCAATCTGTAATGCAGGCCACAGGGAAAAATCTGGAAAATTTGGAGACAGTAAAAGATTTTTTGTTTGTCTCAGATG GAAAACAGTATGAAGAGTTTGACTGGAGAGACCCTTTTGTTTTTTGGAATGACGAAGACCAATGCTATTATATGCTGTTG GCGTCAAGAGTGACGAACAGAGGAGATCTCAGGGGTGGATGCATTGCATTGTGTAAGTCCGAAGATTTAATAAACTGGAC TTATGAGAAACCTTTTTATGATCCTAAAATGTATATTACGATGGAATGTCCTGAACTGTTTAAAATGGGCGAATATTGGT ATCTGGTATTTTCAACATTTTCAGATCAGTTTACAACACATTATCGTATTTCGAAAAACTGGAATGGCCCATGGGAAATA CCTGATGATGATGTTTTTGATACAAGAGCTGATTATGCAATCAAGACTGCTTCTGATGGCAAAAGACGATTTGCTTTCGG ATGGATAGCGAGCAAATATGGAAATACTGATTTTGGTCCATGGGAATGGGGCGGAACAATGAATTTTCATGAAATAATTC AGAATTCGAAAAACGGAGAACTTAGAATTAAAGCTATTCCGGAAGTGCTGGATTATTTTTCGAAAGAGATTGAATTGAAA AAAGAAACTTTATATAACTGCAAGATGGTACAGGCGCAGGATGGAGTCAGCGTTGAAAGTGATACGCTGGGGGCTCTTTT ATATCCTTTAGAAGGTGATACTTTTGCGTTGGATATGGTAATAAAGCCTGAGAGATACCATGAATTTGGAATTGCGTTAC ATGTGGATAAAGAACTCGAAACGGGTTATTTCTTACGTATGAACCCTAAAAATCAATTAGTTGCATGGGATATGTGGCCA AGAGGAGAACAGGGAAGATATCAGTGGCAGATAAAGGGAGATGTTCCTTATCAGATAGAAACTGCAAGAAAACTGCCAAA AGCGGAAGAATATCGAGTTCACATCATAAAAGAAAAAGATATCTGCGTAGTGTATATTAATGATGAAATTGTTCTTTCGA CCAGGATGTATAATCATAAAGATGGTTATGCAGGTATTTATGTAGTACAAGGCGATGTAAAATTAATTCAATATAAAGAA AAAAGGAGCGAGTAA
Upstream 100 bases:
>100_bases AAGAATATGATAATGTAAATGCATGAAACGAAATGTGCAAATGGTGCAAAAAGGAGGGCAAAAATGAGGCAATTATTTTA TAAACAAAAGGAGGGTAAAA
Downstream 100 bases:
>100_bases TATGAGGAAAAAGATAATTAGTGCTATGTTGGCATTGTGTATGGCTGGTAGCTTATTAACAGGATGTGGGACGTCTGCTG ATGCAGAAAAGAAAAGTAAA
Product: putative beta-fructofuranosidase protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Glycoside Hydrolase; Glycosyl Hydrolase; Family; Beta-Fructofuranosidase Protein; Glycoside Hydrolase Family Protein; Glycosyl Hydrolases Family
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MGRLFYKPENAWVGDLIPYYENGTYYGFYLHDPRIRDKEYAEDTTWHLIETKDFVNLDYKGESIARGGIHDANKNAYTGS VIKCEKDGLYHVFYTAYNEDFKLRGKTIQSVMQATGKNLENLETVKDFLFVSDGKQYEEFDWRDPFVFWNDEDQCYYMLL ASRVTNRGDLRGGCIALCKSEDLINWTYEKPFYDPKMYITMECPELFKMGEYWYLVFSTFSDQFTTHYRISKNWNGPWEI PDDDVFDTRADYAIKTASDGKRRFAFGWIASKYGNTDFGPWEWGGTMNFHEIIQNSKNGELRIKAIPEVLDYFSKEIELK KETLYNCKMVQAQDGVSVESDTLGALLYPLEGDTFALDMVIKPERYHEFGIALHVDKELETGYFLRMNPKNQLVAWDMWP RGEQGRYQWQIKGDVPYQIETARKLPKAEEYRVHIIKEKDICVVYINDEIVLSTRMYNHKDGYAGIYVVQGDVKLIQYKE KRSE
Sequences:
>Translated_484_residues MGRLFYKPENAWVGDLIPYYENGTYYGFYLHDPRIRDKEYAEDTTWHLIETKDFVNLDYKGESIARGGIHDANKNAYTGS VIKCEKDGLYHVFYTAYNEDFKLRGKTIQSVMQATGKNLENLETVKDFLFVSDGKQYEEFDWRDPFVFWNDEDQCYYMLL ASRVTNRGDLRGGCIALCKSEDLINWTYEKPFYDPKMYITMECPELFKMGEYWYLVFSTFSDQFTTHYRISKNWNGPWEI PDDDVFDTRADYAIKTASDGKRRFAFGWIASKYGNTDFGPWEWGGTMNFHEIIQNSKNGELRIKAIPEVLDYFSKEIELK KETLYNCKMVQAQDGVSVESDTLGALLYPLEGDTFALDMVIKPERYHEFGIALHVDKELETGYFLRMNPKNQLVAWDMWP RGEQGRYQWQIKGDVPYQIETARKLPKAEEYRVHIIKEKDICVVYINDEIVLSTRMYNHKDGYAGIYVVQGDVKLIQYKE KRSE >Mature_483_residues GRLFYKPENAWVGDLIPYYENGTYYGFYLHDPRIRDKEYAEDTTWHLIETKDFVNLDYKGESIARGGIHDANKNAYTGSV IKCEKDGLYHVFYTAYNEDFKLRGKTIQSVMQATGKNLENLETVKDFLFVSDGKQYEEFDWRDPFVFWNDEDQCYYMLLA SRVTNRGDLRGGCIALCKSEDLINWTYEKPFYDPKMYITMECPELFKMGEYWYLVFSTFSDQFTTHYRISKNWNGPWEIP DDDVFDTRADYAIKTASDGKRRFAFGWIASKYGNTDFGPWEWGGTMNFHEIIQNSKNGELRIKAIPEVLDYFSKEIELKK ETLYNCKMVQAQDGVSVESDTLGALLYPLEGDTFALDMVIKPERYHEFGIALHVDKELETGYFLRMNPKNQLVAWDMWPR GEQGRYQWQIKGDVPYQIETARKLPKAEEYRVHIIKEKDICVVYINDEIVLSTRMYNHKDGYAGIYVVQGDVKLIQYKEK RSE
Specific function: Unknown
COG id: COG1621
COG function: function code G; Beta-fructosidases (levanase/invertase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56974; Mature: 56843
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLFYKPENAWVGDLIPYYENGTYYGFYLHDPRIRDKEYAEDTTWHLIETKDFVNLDYK CCCEEECCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEECC GESIARGGIHDANKNAYTGSVIKCEKDGLYHVFYTAYNEDFKLRGKTIQSVMQATGKNLE CCCEECCCCCCCCCCCCCCCEEEECCCCEEEEEEEEECCCEEECCHHHHHHHHHHCCCHH NLETVKDFLFVSDGKQYEEFDWRDPFVFWNDEDQCYYMLLASRVTNRGDLRGGCIALCKS HHHHHHHEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEEHHHCCCCCCCCCEEEEECC EDLINWTYEKPFYDPKMYITMECPELFKMGEYWYLVFSTFSDQFTTHYRISKNWNGPWEI CCCEEEEECCCCCCCEEEEEEECHHHHHCCCEEEEEEEECCCCCEEEEEEECCCCCCCCC PDDDVFDTRADYAIKTASDGKRRFAFGWIASKYGNTDFGPWEWGGTMNFHEIIQNSKNGE CCCCCCCCCCCEEEEECCCCCEEEEEEEEEHHCCCCCCCCCCCCCCCCHHHHHCCCCCCE LRIKAIPEVLDYFSKEIELKKETLYNCKMVQAQDGVSVESDTLGALLYPLEGDTFALDMV EEEEECHHHHHHHHHHHEECHHHHCEEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEE IKPERYHEFGIALHVDKELETGYFLRMNPKNQLVAWDMWPRGEQGRYQWQIKGDVPYQIE ECCCCCCEEEEEEEECCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCEEEH TARKLPKAEEYRVHIIKEKDICVVYINDEIVLSTRMYNHKDGYAGIYVVQGDVKLIQYKE HHHCCCCCCCEEEEEEECCCEEEEEECCEEEEEEEEECCCCCCEEEEEEECCEEEEEEEH KRSE HHCC >Mature Secondary Structure GRLFYKPENAWVGDLIPYYENGTYYGFYLHDPRIRDKEYAEDTTWHLIETKDFVNLDYK CCEEECCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEECC GESIARGGIHDANKNAYTGSVIKCEKDGLYHVFYTAYNEDFKLRGKTIQSVMQATGKNLE CCCEECCCCCCCCCCCCCCCEEEECCCCEEEEEEEEECCCEEECCHHHHHHHHHHCCCHH NLETVKDFLFVSDGKQYEEFDWRDPFVFWNDEDQCYYMLLASRVTNRGDLRGGCIALCKS HHHHHHHEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEEHHHCCCCCCCCCEEEEECC EDLINWTYEKPFYDPKMYITMECPELFKMGEYWYLVFSTFSDQFTTHYRISKNWNGPWEI CCCEEEEECCCCCCCEEEEEEECHHHHHCCCEEEEEEEECCCCCEEEEEEECCCCCCCCC PDDDVFDTRADYAIKTASDGKRRFAFGWIASKYGNTDFGPWEWGGTMNFHEIIQNSKNGE CCCCCCCCCCCEEEEECCCCCEEEEEEEEEHHCCCCCCCCCCCCCCCCHHHHHCCCCCCE LRIKAIPEVLDYFSKEIELKKETLYNCKMVQAQDGVSVESDTLGALLYPLEGDTFALDMV EEEEECHHHHHHHHHHHEECHHHHCEEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEE IKPERYHEFGIALHVDKELETGYFLRMNPKNQLVAWDMWPRGEQGRYQWQIKGDVPYQIE ECCCCCCEEEEEEEECCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCEEEH TARKLPKAEEYRVHIIKEKDICVVYINDEIVLSTRMYNHKDGYAGIYVVQGDVKLIQYKE HHHCCCCCCCEEEEEEECCCEEEEEECCEEEEEEEEECCCCCCEEEEEEECCEEEEEEEH KRSE HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA