| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
Click here to switch to the map view.
The map label for this gene is 238922698
Identifier: 238922698
GI number: 238922698
Start: 260958
End: 261362
Strand: Direct
Name: 238922698
Synonym: EUBREC_0273
Alternate gene names: NA
Gene position: 260958-261362 (Clockwise)
Preceding gene: 238922696
Following gene: 238922699
Centisome position: 7.56
GC content: 42.47
Gene sequence:
>405_bases ATGCGTCTGTGGCACGCTGCGCGGTATAAAACGCAGACTATTCTTATCAATTATTACAATCTGGACGCCATTATTTCCGT TGGTTACAGGGTAAACTCCATTCAGGCAACCAGGTTCCGTATATGGGCAACCGGTATTTTGAAGGAATATATGATAAAGG GCTTTGCTATGGATGATGAGCGCCTGAAACAGGGTAAAACAGCTTTTGGAAAAGATTATTTCCGTGAATTGCTGGAAAGA GTTCGCTCCATCCGTGCCAGCGAACGCAGAATATGGCAACAGATAACGGATATATTTGCCGAGTGCAGCATTGATTATGA CAGAGATTCAGATACTGCATATCATTTTTATGCCACCATACAGAATAAATTCCACTATGCCATTACACACAAGGTGCTGA AGTAG
Upstream 100 bases:
>100_bases TCAGCTTGCTCTTGATATCGTTGTATCTTTTTGTGTATGGTTTCAGGTTTCGGAGATTTCTCTCCGTAGGTTTCTTCCCA CTTGGCACCTTCTTTCTGAT
Downstream 100 bases:
>100_bases CTTTTTATAATTTAGGCGAACTCAATATAAAACAATGTAGTGGTTGTTGTATTATCCCGTGATGATGAGCAAAGCGGTGA CAGCAACAGTATCATAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MRLWHAARYKTQTILINYYNLDAIISVGYRVNSIQATRFRIWATGILKEYMIKGFAMDDERLKQGKTAFGKDYFRELLER VRSIRASERRIWQQITDIFAECSIDYDRDSDTAYHFYATIQNKFHYAITHKVLK
Sequences:
>Translated_134_residues MRLWHAARYKTQTILINYYNLDAIISVGYRVNSIQATRFRIWATGILKEYMIKGFAMDDERLKQGKTAFGKDYFRELLER VRSIRASERRIWQQITDIFAECSIDYDRDSDTAYHFYATIQNKFHYAITHKVLK >Mature_134_residues MRLWHAARYKTQTILINYYNLDAIISVGYRVNSIQATRFRIWATGILKEYMIKGFAMDDERLKQGKTAFGKDYFRELLER VRSIRASERRIWQQITDIFAECSIDYDRDSDTAYHFYATIQNKFHYAITHKVLK
Specific function: Unknown
COG id: COG3943
COG function: function code R; Virulence protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16074; Mature: 16074
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLWHAARYKTQTILINYYNLDAIISVGYRVNSIQATRFRIWATGILKEYMIKGFAMDDE CCCCCCCCCCEEEEEEEEECHHEEEECCEEECCEEEHHHHHHHHHHHHHHHHHCCCCCHH RLKQGKTAFGKDYFRELLERVRSIRASERRIWQQITDIFAECSIDYDRDSDTAYHFYATI HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEE QNKFHYAITHKVLK CCCCHHHHHHHHCC >Mature Secondary Structure MRLWHAARYKTQTILINYYNLDAIISVGYRVNSIQATRFRIWATGILKEYMIKGFAMDDE CCCCCCCCCCEEEEEEEEECHHEEEECCEEECCEEEHHHHHHHHHHHHHHHHHCCCCCHH RLKQGKTAFGKDYFRELLERVRSIRASERRIWQQITDIFAECSIDYDRDSDTAYHFYATI HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEE QNKFHYAITHKVLK CCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA