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The map label for this gene is 238922663

Identifier: 238922663

GI number: 238922663

Start: 220304

End: 220909

Strand: Direct

Name: 238922663

Synonym: EUBREC_0238

Alternate gene names: NA

Gene position: 220304-220909 (Clockwise)

Preceding gene: 238922662

Following gene: 238922664

Centisome position: 6.39

GC content: 43.07

Gene sequence:

>606_bases
ATGGCAACATTTACCAGAAAAGCCATAATGCAGACTTTTTTACATATACTGAAAAACAAACCGCTTGACAGGATTACAGT
CAAGGATATATGCGAGCAGTGTGAGATAAACAGAAATACATTTTACTATTATTTCAAGGACATATATGATGTGCTTGAGG
CCATATTTGAGGACGAGGTCAGGCTTGTGATGGATGAGGCAAAGGAAGGCGTGACATTTCATGATGCATATGCCAGAGTC
GCTGCCCTTATTCTTAATAACCGCGAGGCGATAATGCACATTTATGCATCGGAAAACGGCAGGGTATTAAGGACATATCT
GGATGCCGTGGTTACGCAGGTGGTGCGCCGCTTTGTGTTGGAAAAGGCAGAGGGCTACAGCCTGGATGATAGTGACATTG
CTTTTATCACGGCGTTTTACAGCAACGGAATCGTGGGCAGTACAATTAAGTGGATTGAGAGAGGCAGTATGATGAGCCGT
TTGCCTGAGAACATTACGGCAAATGGCGTTGGACTGTCAAAAAGCCAATACAACAGAGATATTGTTAAGAGAATAGGTGA
CTCTTTCGATGCCACAATTTATGATATGATTGAGTGCTGTCTGTAG

Upstream 100 bases:

>100_bases
GTATAATACGCGCACGCTGAGTGAGGGAGACACGATGTTATTGTTCATACCTTAATGTGAACAGCAGCACAGCAGGCACA
GCATAGCAGGAGATATACAC

Downstream 100 bases:

>100_bases
GCAGGCGGATATTGTATGACAAAATAATTCGAACAGATTTGACAGAGTGTCTGAATTTCAGACACTCTTATTTTTTTGTC
CATTTTAAAGACGATTATGG

Product: hypothetical protein

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator TetR Family; Regulatory Protein TetR; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MATFTRKAIMQTFLHILKNKPLDRITVKDICEQCEINRNTFYYYFKDIYDVLEAIFEDEVRLVMDEAKEGVTFHDAYARV
AALILNNREAIMHIYASENGRVLRTYLDAVVTQVVRRFVLEKAEGYSLDDSDIAFITAFYSNGIVGSTIKWIERGSMMSR
LPENITANGVGLSKSQYNRDIVKRIGDSFDATIYDMIECCL

Sequences:

>Translated_201_residues
MATFTRKAIMQTFLHILKNKPLDRITVKDICEQCEINRNTFYYYFKDIYDVLEAIFEDEVRLVMDEAKEGVTFHDAYARV
AALILNNREAIMHIYASENGRVLRTYLDAVVTQVVRRFVLEKAEGYSLDDSDIAFITAFYSNGIVGSTIKWIERGSMMSR
LPENITANGVGLSKSQYNRDIVKRIGDSFDATIYDMIECCL
>Mature_200_residues
ATFTRKAIMQTFLHILKNKPLDRITVKDICEQCEINRNTFYYYFKDIYDVLEAIFEDEVRLVMDEAKEGVTFHDAYARVA
ALILNNREAIMHIYASENGRVLRTYLDAVVTQVVRRFVLEKAEGYSLDDSDIAFITAFYSNGIVGSTIKWIERGSMMSRL
PENITANGVGLSKSQYNRDIVKRIGDSFDATIYDMIECCL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23133; Mature: 23002

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATFTRKAIMQTFLHILKNKPLDRITVKDICEQCEINRNTFYYYFKDIYDVLEAIFEDEV
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH
RLVMDEAKEGVTFHDAYARVAALILNNREAIMHIYASENGRVLRTYLDAVVTQVVRRFVL
HHHHHHHHCCCCHHHHHHHHHHHHHCCCHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
EKAEGYSLDDSDIAFITAFYSNGIVGSTIKWIERGSMMSRLPENITANGVGLSKSQYNRD
HHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
IVKRIGDSFDATIYDMIECCL
HHHHCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
ATFTRKAIMQTFLHILKNKPLDRITVKDICEQCEINRNTFYYYFKDIYDVLEAIFEDEV
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH
RLVMDEAKEGVTFHDAYARVAALILNNREAIMHIYASENGRVLRTYLDAVVTQVVRRFVL
HHHHHHHHCCCCHHHHHHHHHHHHHCCCHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
EKAEGYSLDDSDIAFITAFYSNGIVGSTIKWIERGSMMSRLPENITANGVGLSKSQYNRD
HHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
IVKRIGDSFDATIYDMIECCL
HHHHCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA