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The map label for this gene is ycbL [H]

Identifier: 238922553

GI number: 238922553

Start: 121639

End: 122076

Strand: Direct

Name: ycbL [H]

Synonym: EUBREC_0127

Alternate gene names: 238922553

Gene position: 121639-122076 (Clockwise)

Preceding gene: 238922551

Following gene: 238922554

Centisome position: 3.53

GC content: 30.59

Gene sequence:

>438_bases
ATGATATCATATCTTTTCGAATTTACCACTTTATATATATCTGTAAACTTTATTTATCATAATATTAAGACAACTATATC
ATTTATATCATGCCTTGTCAATTTTTATCAAAATCCACTCATACAAAAGAAAAATTTGTATATCATGCACAATAATATTG
TTCTTAAATATGATAAGAAGCGTGTGTGGCATGGCGAAGAAGAAGTGCATCTCACATCACGCGAATGGAAAATATTAGAA
CTTTTGGCGAAAAATCAGGGAAAGATTGTAACAAAAGAAGTTATTTTAGAACAGGTATGGGATATTGATGAGAATTTTGT
GGATACACATGCGGTTACGGTTGTGATAAACAGATTAAGGAAAAAGATAGAGAACAATATGACAGAGCCTGTATACATAA
GGAATGTGTTTGGAGTAGGATATACTTTTGGAGAATAG

Upstream 100 bases:

>100_bases
CATAGGGTATTTTTTTCCATTTTGATGAATAGCCGTTTTTGAAGAACTCAATATTGTGTATTCTTGGCATTTATATATTT
GGGTGAATCATTCAATTTTA

Downstream 100 bases:

>100_bases
GGTTGGTTTAAAAATAACCTTATTATCATGCGCATATTCTATGGAAAATTCCGCTAAAATATGCTTTAATAGAAGATATA
TAGCAGTAAAGGAGATGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MISYLFEFTTLYISVNFIYHNIKTTISFISCLVNFYQNPLIQKKNLYIMHNNIVLKYDKKRVWHGEEEVHLTSREWKILE
LLAKNQGKIVTKEVILEQVWDIDENFVDTHAVTVVINRLRKKIENNMTEPVYIRNVFGVGYTFGE

Sequences:

>Translated_145_residues
MISYLFEFTTLYISVNFIYHNIKTTISFISCLVNFYQNPLIQKKNLYIMHNNIVLKYDKKRVWHGEEEVHLTSREWKILE
LLAKNQGKIVTKEVILEQVWDIDENFVDTHAVTVVINRLRKKIENNMTEPVYIRNVFGVGYTFGE
>Mature_145_residues
MISYLFEFTTLYISVNFIYHNIKTTISFISCLVNFYQNPLIQKKNLYIMHNNIVLKYDKKRVWHGEEEVHLTSREWKILE
LLAKNQGKIVTKEVILEQVWDIDENFVDTHAVTVVINRLRKKIENNMTEPVYIRNVFGVGYTFGE

Specific function: Member of the two-component regulatory system ycbM/ycbL [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786784, Length=84, Percent_Identity=40.4761904761905, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1789402, Length=98, Percent_Identity=33.6734693877551, Blast_Score=61, Evalue=3e-11,
Organism=Escherichia coli, GI1786911, Length=85, Percent_Identity=40, Blast_Score=60, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 17290; Mature: 17290

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISYLFEFTTLYISVNFIYHNIKTTISFISCLVNFYQNPLIQKKNLYIMHNNIVLKYDKK
CCHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCC
RVWHGEEEVHLTSREWKILELLAKNQGKIVTKEVILEQVWDIDENFVDTHAVTVVINRLR
CCCCCCCCEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
KKIENNMTEPVYIRNVFGVGYTFGE
HHHHCCCCCCEEEEEEEECCEECCC
>Mature Secondary Structure
MISYLFEFTTLYISVNFIYHNIKTTISFISCLVNFYQNPLIQKKNLYIMHNNIVLKYDKK
CCHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCC
RVWHGEEEVHLTSREWKILELLAKNQGKIVTKEVILEQVWDIDENFVDTHAVTVVINRLR
CCCCCCCCEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
KKIENNMTEPVYIRNVFGVGYTFGE
HHHHCCCCCCEEEEEEEECCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704254; 9384377 [H]