Click here to switch to the map view.

The map label for this gene is 238922538

Identifier: 238922538

GI number: 238922538

Start: 109120

End: 109836

Strand: Direct

Name: 238922538

Synonym: EUBREC_0112

Alternate gene names: NA

Gene position: 109120-109836 (Clockwise)

Preceding gene: 238922537

Following gene: 238922539

Centisome position: 3.16

GC content: 48.26

Gene sequence:

>717_bases
ATGATTTCCGATGCGGCAGCTGCCGTGGATGTGGAGACTCATGTGTTGCGTTACTGGGAGGATGAGCTGGGACTTGATGT
GCCTAGAAATGAACTTGGTCACAGATACTATACGAGAGACAATATAAAACAGTTTTTGAGGATAAAGGAGCTTAAGGAGA
AGGGGTATCAGCTTCGCGCAATCCGTGATATGCTTCATTCGGATGCACCGGGTGAGCCGTTAAATCCACCGAATCCTGCG
GCTATGGAAAAATCCGTGCAACCTGTAAATTACACGAATATCACAAATCAGGCGGCAAAACAGGAGATGTCAGGGTATAA
TCCGGCATATCACGATGAACTGCCGGGATACAATCATACATATCGAAGCCGCACGGCAGATGAGCGTATGGATGAGTTTC
GCGAGCTGATGAGCAATATCGTGGGGAGAGCCATAGCACTGAACAATGAGGAGCTGAGTCAGCAGATATCCACTGAGGTG
CAGGAGCGGATATTAAAGGAAATGAACTATCTGATGCGCGAACAGGATATTGCGCAGGAGGAGAGATATAAAAAGCTGGA
CGCTGCCATACGCGGAAATCTGCGTAGAAAGGGGCTTTTTTCAAGGAAAAGGAACGCTGACATGCCTGCAGATACAAAAA
TAAGCGCTGCAGACACCAAGGGAAAGAAGGGGCGCGACAAGACGCATACGCATGAGCTTAATCCGGTGAGACTGTAG

Upstream 100 bases:

>100_bases
ACTTTTTCGCAGTGCTGGTTCTTTTCGATGTGCCAAAAGCGTATAGCGAATAAAATATAATTTCAGACAGGAGGACTTCA
ATTTGGAGAAAGTACGTTAC

Downstream 100 bases:

>100_bases
AGCATGCATGACAACGCTTACACTATAAAAATAGTTACTGCAAAAAACGCTTACAGCATAAAATTGATTACAATACAAAG
ACGATTACAACACAAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MISDAAAAVDVETHVLRYWEDELGLDVPRNELGHRYYTRDNIKQFLRIKELKEKGYQLRAIRDMLHSDAPGEPLNPPNPA
AMEKSVQPVNYTNITNQAAKQEMSGYNPAYHDELPGYNHTYRSRTADERMDEFRELMSNIVGRAIALNNEELSQQISTEV
QERILKEMNYLMREQDIAQEERYKKLDAAIRGNLRRKGLFSRKRNADMPADTKISAADTKGKKGRDKTHTHELNPVRL

Sequences:

>Translated_238_residues
MISDAAAAVDVETHVLRYWEDELGLDVPRNELGHRYYTRDNIKQFLRIKELKEKGYQLRAIRDMLHSDAPGEPLNPPNPA
AMEKSVQPVNYTNITNQAAKQEMSGYNPAYHDELPGYNHTYRSRTADERMDEFRELMSNIVGRAIALNNEELSQQISTEV
QERILKEMNYLMREQDIAQEERYKKLDAAIRGNLRRKGLFSRKRNADMPADTKISAADTKGKKGRDKTHTHELNPVRL
>Mature_238_residues
MISDAAAAVDVETHVLRYWEDELGLDVPRNELGHRYYTRDNIKQFLRIKELKEKGYQLRAIRDMLHSDAPGEPLNPPNPA
AMEKSVQPVNYTNITNQAAKQEMSGYNPAYHDELPGYNHTYRSRTADERMDEFRELMSNIVGRAIALNNEELSQQISTEV
QERILKEMNYLMREQDIAQEERYKKLDAAIRGNLRRKGLFSRKRNADMPADTKISAADTKGKKGRDKTHTHELNPVRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27542; Mature: 27542

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISDAAAAVDVETHVLRYWEDELGLDVPRNELGHRYYTRDNIKQFLRIKELKEKGYQLRA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHH
IRDMLHSDAPGEPLNPPNPAAMEKSVQPVNYTNITNQAAKQEMSGYNPAYHDELPGYNHT
HHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCH
YRSRTADERMDEFRELMSNIVGRAIALNNEELSQQISTEVQERILKEMNYLMREQDIAQE
HHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERYKKLDAAIRGNLRRKGLFSRKRNADMPADTKISAADTKGKKGRDKTHTHELNPVRL
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MISDAAAAVDVETHVLRYWEDELGLDVPRNELGHRYYTRDNIKQFLRIKELKEKGYQLRA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHH
IRDMLHSDAPGEPLNPPNPAAMEKSVQPVNYTNITNQAAKQEMSGYNPAYHDELPGYNHT
HHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCH
YRSRTADERMDEFRELMSNIVGRAIALNNEELSQQISTEVQERILKEMNYLMREQDIAQE
HHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERYKKLDAAIRGNLRRKGLFSRKRNADMPADTKISAADTKGKKGRDKTHTHELNPVRL
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA