| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238922447
Identifier: 238922447
GI number: 238922447
Start: 23680
End: 24552
Strand: Direct
Name: 238922447
Synonym: EUBREC_0021
Alternate gene names: NA
Gene position: 23680-24552 (Clockwise)
Preceding gene: 238922446
Following gene: 238922448
Centisome position: 0.69
GC content: 43.41
Gene sequence:
>873_bases ATGAATGCGAACGATAAAACAGAAAAGGTACTAAGAGAAATTCATATCATGCTCTCAAAGGCGGAGCCGTATAAGCCGGA GCCGAGCAGGGTGATCATAAACAAGCAGCAAATGATAGATTTACTTGCTGAGCTGAATAAGTGTATATATGCAATACAGG ATGAGTATGAGCTTACTGAACAGAGTCGCAATCACGCAGAGAGAGAGTTCAGAAAGAAGGGGGATCAGATAGTCTGGGAT GCAAGCAGAAAGGCTGAGGATGTGTATGCAGCATCGGTTATCTATACGGATGAGGCGCTTTCAAGAGTGCGTGATATCAT CAATGATACCAACGAGTCACTTGAAAAGCTGTGCAAGAATATGAAGGATAAGATTGCAGAGCAGGAGAAGATAGTTAAAA CTAACCAGTATGAGCTCAAGGGACAGCTTCAGGATTTGTCCGATACGGAGAAGTATCTTAAGATTATCGATGACAGAAAT AAGGAGATAGAACGTCAGAAAAATGCAGGTAAACCTGTAGAGGAGCGTACTATTGACAATGAAGAGAAGTCCATCTATGC AAACAGACAGACTGAAATCAAGGTAAATATGGATTATATCAGAAAACTGGGACTTGCTGAGGGCGAGGACCTGGGAGATG GTGTAGTGGGTGAAGTGAAGCTTGCAGACGATACACCTGATGCCGGATTAAATCATAGCAATGATAAGGATGAAGCCAAG GCTGCCGGCTCAAAATCGTCTGTTGATGAGGATTATAAGGCAATAAGCAGAAAAGCCGGCAATCCACCTGTTATCAACAC AAAGGAAGGGAAGGAGCTCACAGACGGTATCCACAGAATGTGGCAGAGCATCACCGGAAATAAAGGGAAATGA
Upstream 100 bases:
>100_bases TTACGAGAAGCGGATTTTCATATAAAATATGGGTAAGTGGTGAGTATTCAGAACCACCCTGAATAGTTATAATGTTAATT TAAATCCGAGGAAATAGAAA
Downstream 100 bases:
>100_bases AACACACCTATGTAATATAAAGCAGCAGTTCAAAACAGAACGGCTGCTTTTTGGCTTATATTTAAAAGTGGGTAATATTA AGCAGATTTTAAGAAAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MNANDKTEKVLREIHIMLSKAEPYKPEPSRVIINKQQMIDLLAELNKCIYAIQDEYELTEQSRNHAEREFRKKGDQIVWD ASRKAEDVYAASVIYTDEALSRVRDIINDTNESLEKLCKNMKDKIAEQEKIVKTNQYELKGQLQDLSDTEKYLKIIDDRN KEIERQKNAGKPVEERTIDNEEKSIYANRQTEIKVNMDYIRKLGLAEGEDLGDGVVGEVKLADDTPDAGLNHSNDKDEAK AAGSKSSVDEDYKAISRKAGNPPVINTKEGKELTDGIHRMWQSITGNKGK
Sequences:
>Translated_290_residues MNANDKTEKVLREIHIMLSKAEPYKPEPSRVIINKQQMIDLLAELNKCIYAIQDEYELTEQSRNHAEREFRKKGDQIVWD ASRKAEDVYAASVIYTDEALSRVRDIINDTNESLEKLCKNMKDKIAEQEKIVKTNQYELKGQLQDLSDTEKYLKIIDDRN KEIERQKNAGKPVEERTIDNEEKSIYANRQTEIKVNMDYIRKLGLAEGEDLGDGVVGEVKLADDTPDAGLNHSNDKDEAK AAGSKSSVDEDYKAISRKAGNPPVINTKEGKELTDGIHRMWQSITGNKGK >Mature_290_residues MNANDKTEKVLREIHIMLSKAEPYKPEPSRVIINKQQMIDLLAELNKCIYAIQDEYELTEQSRNHAEREFRKKGDQIVWD ASRKAEDVYAASVIYTDEALSRVRDIINDTNESLEKLCKNMKDKIAEQEKIVKTNQYELKGQLQDLSDTEKYLKIIDDRN KEIERQKNAGKPVEERTIDNEEKSIYANRQTEIKVNMDYIRKLGLAEGEDLGDGVVGEVKLADDTPDAGLNHSNDKDEAK AAGSKSSVDEDYKAISRKAGNPPVINTKEGKELTDGIHRMWQSITGNKGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33043; Mature: 33043
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNANDKTEKVLREIHIMLSKAEPYKPEPSRVIINKQQMIDLLAELNKCIYAIQDEYELTE CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH QSRNHAEREFRKKGDQIVWDASRKAEDVYAASVIYTDEALSRVRDIINDTNESLEKLCKN HHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHEECHHHHHHHHHHHCCCHHHHHHHHHH MKDKIAEQEKIVKTNQYELKGQLQDLSDTEKYLKIIDDRNKEIERQKNAGKPVEERTIDN HHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHCCC EEKSIYANRQTEIKVNMDYIRKLGLAEGEDLGDGVVGEVKLADDTPDAGLNHSNDKDEAK HHHHEECCCCEEEEECHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHH AAGSKSSVDEDYKAISRKAGNPPVINTKEGKELTDGIHRMWQSITGNKGK HCCCCCCCHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNANDKTEKVLREIHIMLSKAEPYKPEPSRVIINKQQMIDLLAELNKCIYAIQDEYELTE CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH QSRNHAEREFRKKGDQIVWDASRKAEDVYAASVIYTDEALSRVRDIINDTNESLEKLCKN HHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHEECHHHHHHHHHHHCCCHHHHHHHHHH MKDKIAEQEKIVKTNQYELKGQLQDLSDTEKYLKIIDDRNKEIERQKNAGKPVEERTIDN HHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHCCC EEKSIYANRQTEIKVNMDYIRKLGLAEGEDLGDGVVGEVKLADDTPDAGLNHSNDKDEAK HHHHEECCCCEEEEECHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHH AAGSKSSVDEDYKAISRKAGNPPVINTKEGKELTDGIHRMWQSITGNKGK HCCCCCCCHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA