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The map label for this gene is ymdC [C]

Identifier: 238922421

GI number: 238922421

Start: 615727

End: 617160

Strand: Reverse

Name: ymdC [C]

Synonym: EUBELI_20657

Alternate gene names: 238922421

Gene position: 617160-615727 (Counterclockwise)

Preceding gene: 238922422

Following gene: 238922420

Centisome position: 98.47

GC content: 36.4

Gene sequence:

>1434_bases
ATGAAAAAGTATAAAATATGTGAAATCCTTCTTGTTATACTGGCAATTTTTTTATGTGTGGCTTTTTATGAATTGATCGG
AATCTGCGTTGCATATAAAAAGCAGCCGGAAGTGTCCAATACAACCAAAAAAGAAACAAAAAATGGGTCATGGAACGAAT
GCAGTGAAAATACAGAACGGGCAGTAATCATAGAAAAGAATCCAGAAGCGCTTTTACAAAGAGTGCGTTTGATCAAGAAT
GCAAAAAAGGAAATTATTCTTTCTACTTTTGCATTTAAATCCGATGAAAGTGGAAAATTGATTTTAGGAGCACTGCATGA
TGCGGCAGACAGAGGTGTACATATTCGTCTGTTAGTAGATGGAATGGAGAGCTGGATTGATATGGAAGGAAATCCGTATT
TCTATGGATTATCTTCCCATGAGAATGTTGAAATTAAACTGTATAATAAGGCCAATCCGTTGAAACCATGGAAAATGATG
GGTAGAATGCATGATAAATATTTGATTGCAGATGGTAAGACATATATTCTTGGCGGAAGAAATACATACAATTATTTCCT
GGGTGATTTTCCGGGACATAAGAACTATGACAGAGACGTGTTAGTGGTTTGCGATGAACCTGAGAAAGAAAATTCAGTTA
ACCAGTTGTTAGAGTATTTTGAAACGATATGGGAACAAGAAGACAGTGGTTATTTTCATGACAATAAAAAACTGGCAAAT
AGAAAATCTGTAAAGAACGCAGTTTTAGAGCTGCAGAACGGCTATCAGAAATATTTTGAAGAGAATAAGGAAAGAATCTG
CGATACCGATTACACGGACGAAACTTTTGAGACAGAAAAGATTGCATTAGTGTCAAATCCTATTCACACAGGTTCCAAAG
AACCAGTAGTGTGGTATCAATTGGGAGAATTGATGAAAAATGCAAAAAATCGTGTGAAGATCCACACGCCATATATTATC
TGTAATGATATGATGTATAATACATGGGAGGAGATTGCAGAGAACGTTTCAGATTTTTCTATCATGACAAATTCAGTTGC
GAATAATGGGAATCCATTTGGGGCTGCCGATTATGCGAAAAACAGAAATAGAATCTTAAGTACAGGAATTAATATCTGGG
AATATGAAGGCGGTTATTCATACCACGGAAAAAGTATTCTGATTGACGATGATCTGTCTGTAATCGGTTCCTTTAATATG
GACATGAGAAGTGCATATCTGGATACGGAACTGATGCTTGTAATTCGCAGTAAAGATATTAATAAACAGTTGGAAGAGGG
CATGATGGAATATGAAAGAGTGTCCCGACAGGTATTGGAAGATGGAACCTATCGTGATCCGTATCATGTAGAGCCAATTG
AATTGACAAAGAAGCGTCAGAGAAAAATATTTTTGGTACAGCATCTGCTTGGATGGGCAAGGTATCTGTTTTAA

Upstream 100 bases:

>100_bases
CTGTCATATTTTTTTATGAAAAATAAATTTTGTTGAGGTTAAATTGAGATTGACTTTGTATTGTATAAGTATGAAATAAA
AAGGAATCAGGTGATGTACA

Downstream 100 bases:

>100_bases
TAAGGAGGAAGGAAAACGTGTTTCAAATATTGATTGTAGAAGATGATAAAGAATTAAGCCAGCTATTCCAAAAAGTGCTT
GAGAAGAATGGATATCAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MKKYKICEILLVILAIFLCVAFYELIGICVAYKKQPEVSNTTKKETKNGSWNECSENTERAVIIEKNPEALLQRVRLIKN
AKKEIILSTFAFKSDESGKLILGALHDAADRGVHIRLLVDGMESWIDMEGNPYFYGLSSHENVEIKLYNKANPLKPWKMM
GRMHDKYLIADGKTYILGGRNTYNYFLGDFPGHKNYDRDVLVVCDEPEKENSVNQLLEYFETIWEQEDSGYFHDNKKLAN
RKSVKNAVLELQNGYQKYFEENKERICDTDYTDETFETEKIALVSNPIHTGSKEPVVWYQLGELMKNAKNRVKIHTPYII
CNDMMYNTWEEIAENVSDFSIMTNSVANNGNPFGAADYAKNRNRILSTGINIWEYEGGYSYHGKSILIDDDLSVIGSFNM
DMRSAYLDTELMLVIRSKDINKQLEEGMMEYERVSRQVLEDGTYRDPYHVEPIELTKKRQRKIFLVQHLLGWARYLF

Sequences:

>Translated_477_residues
MKKYKICEILLVILAIFLCVAFYELIGICVAYKKQPEVSNTTKKETKNGSWNECSENTERAVIIEKNPEALLQRVRLIKN
AKKEIILSTFAFKSDESGKLILGALHDAADRGVHIRLLVDGMESWIDMEGNPYFYGLSSHENVEIKLYNKANPLKPWKMM
GRMHDKYLIADGKTYILGGRNTYNYFLGDFPGHKNYDRDVLVVCDEPEKENSVNQLLEYFETIWEQEDSGYFHDNKKLAN
RKSVKNAVLELQNGYQKYFEENKERICDTDYTDETFETEKIALVSNPIHTGSKEPVVWYQLGELMKNAKNRVKIHTPYII
CNDMMYNTWEEIAENVSDFSIMTNSVANNGNPFGAADYAKNRNRILSTGINIWEYEGGYSYHGKSILIDDDLSVIGSFNM
DMRSAYLDTELMLVIRSKDINKQLEEGMMEYERVSRQVLEDGTYRDPYHVEPIELTKKRQRKIFLVQHLLGWARYLF
>Mature_477_residues
MKKYKICEILLVILAIFLCVAFYELIGICVAYKKQPEVSNTTKKETKNGSWNECSENTERAVIIEKNPEALLQRVRLIKN
AKKEIILSTFAFKSDESGKLILGALHDAADRGVHIRLLVDGMESWIDMEGNPYFYGLSSHENVEIKLYNKANPLKPWKMM
GRMHDKYLIADGKTYILGGRNTYNYFLGDFPGHKNYDRDVLVVCDEPEKENSVNQLLEYFETIWEQEDSGYFHDNKKLAN
RKSVKNAVLELQNGYQKYFEENKERICDTDYTDETFETEKIALVSNPIHTGSKEPVVWYQLGELMKNAKNRVKIHTPYII
CNDMMYNTWEEIAENVSDFSIMTNSVANNGNPFGAADYAKNRNRILSTGINIWEYEGGYSYHGKSILIDDDLSVIGSFNM
DMRSAYLDTELMLVIRSKDINKQLEEGMMEYERVSRQVLEDGTYRDPYHVEPIELTKKRQRKIFLVQHLLGWARYLF

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI87081826, Length=429, Percent_Identity=23.3100233100233, Blast_Score=89, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55426; Mature: 55426

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYKICEILLVILAIFLCVAFYELIGICVAYKKQPEVSNTTKKETKNGSWNECSENTER
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCE
AVIIEKNPEALLQRVRLIKNAKKEIILSTFAFKSDESGKLILGALHDAADRGVHIRLLVD
EEEEECCHHHHHHHHHHHHHHHHHHEEHHHEECCCCCCCEEEEEHHHHHCCCEEEEEEEE
GMESWIDMEGNPYFYGLSSHENVEIKLYNKANPLKPWKMMGRMHDKYLIADGKTYILGGR
CHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEECCCEEEEECC
NTYNYFLGDFPGHKNYDRDVLVVCDEPEKENSVNQLLEYFETIWEQEDSGYFHDNKKLAN
CEEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
RKSVKNAVLELQNGYQKYFEENKERICDTDYTDETFETEKIALVSNPIHTGSKEPVVWYQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEHHH
LGELMKNAKNRVKIHTPYIICNDMMYNTWEEIAENVSDFSIMTNSVANNGNPFGAADYAK
HHHHHHCCCCCEEEECCEEEECCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHC
NRNRILSTGINIWEYEGGYSYHGKSILIDDDLSVIGSFNMDMRSAYLDTELMLVIRSKDI
CCCEEEECCCEEEEECCCEEECCCEEEEECCCHHHCCCCCHHHHHHCCCEEEEEEECCCH
NKQLEEGMMEYERVSRQVLEDGTYRDPYHVEPIELTKKRQRKIFLVQHLLGWARYLF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKYKICEILLVILAIFLCVAFYELIGICVAYKKQPEVSNTTKKETKNGSWNECSENTER
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCE
AVIIEKNPEALLQRVRLIKNAKKEIILSTFAFKSDESGKLILGALHDAADRGVHIRLLVD
EEEEECCHHHHHHHHHHHHHHHHHHEEHHHEECCCCCCCEEEEEHHHHHCCCEEEEEEEE
GMESWIDMEGNPYFYGLSSHENVEIKLYNKANPLKPWKMMGRMHDKYLIADGKTYILGGR
CHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEECCCEEEEECC
NTYNYFLGDFPGHKNYDRDVLVVCDEPEKENSVNQLLEYFETIWEQEDSGYFHDNKKLAN
CEEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
RKSVKNAVLELQNGYQKYFEENKERICDTDYTDETFETEKIALVSNPIHTGSKEPVVWYQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEHHH
LGELMKNAKNRVKIHTPYIICNDMMYNTWEEIAENVSDFSIMTNSVANNGNPFGAADYAK
HHHHHHCCCCCEEEECCEEEECCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHC
NRNRILSTGINIWEYEGGYSYHGKSILIDDDLSVIGSFNMDMRSAYLDTELMLVIRSKDI
CCCEEEECCCEEEEECCCEEECCCEEEEECCCHHHCCCCCHHHHHHCCCEEEEEEECCCH
NKQLEEGMMEYERVSRQVLEDGTYRDPYHVEPIELTKKRQRKIFLVQHLLGWARYLF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]