| Definition | Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_012780 |
| Length | 626,744 |
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The map label for this gene is epsI [H]
Identifier: 238922078
GI number: 238922078
Start: 261716
End: 262810
Strand: Reverse
Name: epsI [H]
Synonym: EUBELI_20313
Alternate gene names: 238922078
Gene position: 262810-261716 (Counterclockwise)
Preceding gene: 238922079
Following gene: 238922077
Centisome position: 41.93
GC content: 24.57
Gene sequence:
>1095_bases ATGTATATGTTTATTAACAGTTTGTTAGATTTAATTCCTTATTCTATAAAAATTCCATTTCATTTGATTGTTGATTATTG GCATTCCCTTTCTGATGAAGAATTAAAAAAACTCAAAAGTATTAAAAAAAATAAAAGATTTATAATAATGGGGGTACCAG AGCATGGTAATATGGGAGATCAAGCAATTGTTTATGCAGAAGAAGCATTTATAAAGAAGTATTTTGATTGTGATGTTATA GAGATAAGTAAAAATTCATATAGGGGGAATAAAAGAAAAATAAAAAAATATATAAACAAAGAGGATGTTATCATCATTAC TGGAGGAGGCTCGATTGGTTCATTATGGAAAAATGAACATAATCATATAGTTAACATAATAAAATCATTTTCCGAAAATC AAATGATTATTTTTCCTCAAACTATTTTTTTTAAGGAATGCGAAGAAAGAGAGATTGATAAATTTAAAAAAATATTAATG AAGAATAAAAATTTAATTATGTGTTTAAGAGAAATGAATTCTTATAATTTTGCTATAAACAGGAAATTATTGCCAGAAAA TAAGTTGTTATTAGTTCCTGATATAGTATTGTTCTTAAATTTTACAAATAATCTGGGACGAAAATATAATCAAAAATCAT GCTTAGTTATAGAGAGAAATGATAAAGAAAAAACAGCTGAAATAGAAAAAATAGAGGAAAAATTAGAGTGTACATATAAA GTTAATAAAAGTGACACTGTAATAAGGCATTTGCGAGTAACAAAAGAAAATAGAGAAAAAGAGTTATTAAAATTGATAGA ACTTATTTCACACTCAGGATTTGTAGTTACAGATAGATTACATGGTATGATTATGAGTATTATCTCTGGTACTCCATGTA TAGCACTTGATAATTCAAGTAAAAAGGTTAGTGGAGTATATGAGTTTATTAAAGATATTTCTACTGTTAAACTTATAAAG GATAAAAATGAAATATCGGAGATTAATTTTAAGAAAATGATAGAAGAACCGCGTGTGTATAATAATACAAATATTATAAA ATATTATGATAATTTAGCACAAGCTATTATGAATGGTATGCTAAATAAAAATTAA
Upstream 100 bases:
>100_bases CTGTCTTTTGCAAGAAAAATACAGTTTTTAGTATGTGGATATTTTGCTAAATTATATGAATTACTTGCTAAAATTAAAAA TTTTTTAAATTAAAAAGGAG
Downstream 100 bases:
>100_bases TAATTAAATTTTAGCAGAAAGGAATATGTATTTAGGCTATGAAAAGATTCATTAATTGTTTAATTCCAGTCACAGCATGT AATTTGAAATGTGAGTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MYMFINSLLDLIPYSIKIPFHLIVDYWHSLSDEELKKLKSIKKNKRFIIMGVPEHGNMGDQAIVYAEEAFIKKYFDCDVI EISKNSYRGNKRKIKKYINKEDVIIITGGGSIGSLWKNEHNHIVNIIKSFSENQMIIFPQTIFFKECEEREIDKFKKILM KNKNLIMCLREMNSYNFAINRKLLPENKLLLVPDIVLFLNFTNNLGRKYNQKSCLVIERNDKEKTAEIEKIEEKLECTYK VNKSDTVIRHLRVTKENREKELLKLIELISHSGFVVTDRLHGMIMSIISGTPCIALDNSSKKVSGVYEFIKDISTVKLIK DKNEISEINFKKMIEEPRVYNNTNIIKYYDNLAQAIMNGMLNKN
Sequences:
>Translated_364_residues MYMFINSLLDLIPYSIKIPFHLIVDYWHSLSDEELKKLKSIKKNKRFIIMGVPEHGNMGDQAIVYAEEAFIKKYFDCDVI EISKNSYRGNKRKIKKYINKEDVIIITGGGSIGSLWKNEHNHIVNIIKSFSENQMIIFPQTIFFKECEEREIDKFKKILM KNKNLIMCLREMNSYNFAINRKLLPENKLLLVPDIVLFLNFTNNLGRKYNQKSCLVIERNDKEKTAEIEKIEEKLECTYK VNKSDTVIRHLRVTKENREKELLKLIELISHSGFVVTDRLHGMIMSIISGTPCIALDNSSKKVSGVYEFIKDISTVKLIK DKNEISEINFKKMIEEPRVYNNTNIIKYYDNLAQAIMNGMLNKN >Mature_364_residues MYMFINSLLDLIPYSIKIPFHLIVDYWHSLSDEELKKLKSIKKNKRFIIMGVPEHGNMGDQAIVYAEEAFIKKYFDCDVI EISKNSYRGNKRKIKKYINKEDVIIITGGGSIGSLWKNEHNHIVNIIKSFSENQMIIFPQTIFFKECEEREIDKFKKILM KNKNLIMCLREMNSYNFAINRKLLPENKLLLVPDIVLFLNFTNNLGRKYNQKSCLVIERNDKEKTAEIEKIEEKLECTYK VNKSDTVIRHLRVTKENREKELLKLIELISHSGFVVTDRLHGMIMSIISGTPCIALDNSSKKVSGVYEFIKDISTVKLIK DKNEISEINFKKMIEEPRVYNNTNIIKYYDNLAQAIMNGMLNKN
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]
COG id: COG5039
COG function: function code GM; Exopolysaccharide biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide pyruvyl transferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007345 [H]
Pfam domain/function: PF04230 PS_pyruv_trans [H]
EC number: NA
Molecular weight: Translated: 42612; Mature: 42612
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYMFINSLLDLIPYSIKIPFHLIVDYWHSLSDEELKKLKSIKKNKRFIIMGVPEHGNMGD CEEHHHHHHHHCCCEEECHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCC QAIVYAEEAFIKKYFDCDVIEISKNSYRGNKRKIKKYINKEDVIIITGGGSIGSLWKNEH CEEEEEHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCCCCEEEEECCCCHHHHHHCCC NHIVNIIKSFSENQMIIFPQTIFFKECEEREIDKFKKILMKNKNLIMCLREMNSYNFAIN HHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEE RKLLPENKLLLVPDIVLFLNFTNNLGRKYNQKSCLVIERNDKEKTAEIEKIEEKLECTYK CEECCCCCEEECCCEEEEEECHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHEEEE VNKSDTVIRHLRVTKENREKELLKLIELISHSGFVVTDRLHGMIMSIISGTPCIALDNSS ECCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCEEEECCCC KKVSGVYEFIKDISTVKLIKDKNEISEINFKKMIEEPRVYNNTNIIKYYDNLAQAIMNGM CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEECCCCEEEHHHHHHHHHHHHH LNKN CCCC >Mature Secondary Structure MYMFINSLLDLIPYSIKIPFHLIVDYWHSLSDEELKKLKSIKKNKRFIIMGVPEHGNMGD CEEHHHHHHHHCCCEEECHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCC QAIVYAEEAFIKKYFDCDVIEISKNSYRGNKRKIKKYINKEDVIIITGGGSIGSLWKNEH CEEEEEHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCCCCEEEEECCCCHHHHHHCCC NHIVNIIKSFSENQMIIFPQTIFFKECEEREIDKFKKILMKNKNLIMCLREMNSYNFAIN HHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEE RKLLPENKLLLVPDIVLFLNFTNNLGRKYNQKSCLVIERNDKEKTAEIEKIEEKLECTYK CEECCCCCEEECCCEEEEEECHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHEEEE VNKSDTVIRHLRVTKENREKELLKLIELISHSGFVVTDRLHGMIMSIISGTPCIALDNSS ECCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCEEEECCCC KKVSGVYEFIKDISTVKLIKDKNEISEINFKKMIEEPRVYNNTNIIKYYDNLAQAIMNGM CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEECCCCEEEHHHHHHHHHHHHH LNKN CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]