| Definition | Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_012780 |
| Length | 626,744 |
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The map label for this gene is 238922054
Identifier: 238922054
GI number: 238922054
Start: 238809
End: 239963
Strand: Reverse
Name: 238922054
Synonym: EUBELI_20289
Alternate gene names: NA
Gene position: 239963-238809 (Counterclockwise)
Preceding gene: 238922056
Following gene: 238922053
Centisome position: 38.29
GC content: 40.78
Gene sequence:
>1155_bases ATGTCAATAAAATCAGAAGCAAAGCTCACCACATTTGAGGCAATAAGCATGATTGTGGGAAACAGTATAGGAACGGGAAT AATAGCAGTTCCGTATCTTGCAACGAAAAACAGTATGCTTGATGTTATATGGATGGTAGGAGCAGCTTACGTCATTAATG TAATTCTACATCTTATAATTGCGGAACTTTCGTATAACAACGGTGGTGTACAGCTTGTAAAAAGTTTTGAGGGGGAATTG TTCCACGGAGTTATGAAGAAGGTATTCAGCTGGATTGTTTTTGTGGTGTATGGGCTTGCGATTATGATAGGAGTGAGCGG CAATATTAACGGTGGGGCACAGATATTTGTGAACTGGTTCGGACTGCCGTTATGGCTGGCACAGGTTATATATTATGTAA TTGCCGGAATTGTTGTATTTATGGGAATGAAGGCGGTAGGAATTGCACAGAAATACGCTGTAATACTTCTTATGGGAATA GTTGCAGTTATGACAGTAGGAACATTTACACATCCAGTTAATGGATTCTATACAGCACCTTTCCATTGGAATAATCTGCT TGCACTGTATAGTATGGTTGTATTTGCGACATCTGCTAATCAGGCGGTTATTCAGGTCGTTAAAGGGCTTGACGGCAATC CGGGAAAGATAAGGAAATCAATATTCATAGGGTTTGGTCTGTCGTCAGCGTTCGTGCTTGTTGTAACACTTACCGTTCTT CTTGGAACTAAGGGAACAATAGATAAGGAACTTGCTTATATGCAGCTTGGAGAAAGCATCGGAAAATGGGCGGTTATTCT TGCAGGTATCTTTTCGCTTTTTGCACTGCTTACAACATTCTGGAGTAACACACTTGCTTTAAGAGATGTCGTGCATGAGC AGGTTGGAATCGGCAACCGTGTAAGCTGGCTTATAGCGACAGTTCCATGTATATTATTTGCGATATTCGGAGTAAGCAGT TTTATAATACTTACAAGAATTATGAGTGGTGTAGTTGTACTGGTGAGCATAATGCTCGTTCTGACATATGGTAAATCAAG AAAGAAAGCAGGAGCCAGTCCTATATGCGGAGTGATAGGAACGCTGCCATTTCAGATTCTTATGGTAGTATCGACGATAG TTTCGGCTATAGGAGCATTAATACCACTCAGCTAA
Upstream 100 bases:
>100_bases GGGGCGGTTGTGGTCAAATGCAAAAATGAATTTACACAATATTCAATGCAATATATAATGTATATAATATGTTATGTCGT GAGTGAAAAGGAGAAAAAAT
Downstream 100 bases:
>100_bases ATATATAACCGGTATTAATTTTAGTGCCGGAAAGAAAGGCGTGAAAGTATGTATAAATCAGACAATTTAAAGCAGACAGA CAATGAAACATTTACATATA
Product: hypothetical protein
Products: NA
Alternate protein names: Amino Acid Permease; Tryptophan/Tyrosine Permease; Amino Acid Transporter Transmembrane; Sodium-Coupled Neutral Amino Acid Transporter
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MSIKSEAKLTTFEAISMIVGNSIGTGIIAVPYLATKNSMLDVIWMVGAAYVINVILHLIIAELSYNNGGVQLVKSFEGEL FHGVMKKVFSWIVFVVYGLAIMIGVSGNINGGAQIFVNWFGLPLWLAQVIYYVIAGIVVFMGMKAVGIAQKYAVILLMGI VAVMTVGTFTHPVNGFYTAPFHWNNLLALYSMVVFATSANQAVIQVVKGLDGNPGKIRKSIFIGFGLSSAFVLVVTLTVL LGTKGTIDKELAYMQLGESIGKWAVILAGIFSLFALLTTFWSNTLALRDVVHEQVGIGNRVSWLIATVPCILFAIFGVSS FIILTRIMSGVVVLVSIMLVLTYGKSRKKAGASPICGVIGTLPFQILMVVSTIVSAIGALIPLS
Sequences:
>Translated_384_residues MSIKSEAKLTTFEAISMIVGNSIGTGIIAVPYLATKNSMLDVIWMVGAAYVINVILHLIIAELSYNNGGVQLVKSFEGEL FHGVMKKVFSWIVFVVYGLAIMIGVSGNINGGAQIFVNWFGLPLWLAQVIYYVIAGIVVFMGMKAVGIAQKYAVILLMGI VAVMTVGTFTHPVNGFYTAPFHWNNLLALYSMVVFATSANQAVIQVVKGLDGNPGKIRKSIFIGFGLSSAFVLVVTLTVL LGTKGTIDKELAYMQLGESIGKWAVILAGIFSLFALLTTFWSNTLALRDVVHEQVGIGNRVSWLIATVPCILFAIFGVSS FIILTRIMSGVVVLVSIMLVLTYGKSRKKAGASPICGVIGTLPFQILMVVSTIVSAIGALIPLS >Mature_383_residues SIKSEAKLTTFEAISMIVGNSIGTGIIAVPYLATKNSMLDVIWMVGAAYVINVILHLIIAELSYNNGGVQLVKSFEGELF HGVMKKVFSWIVFVVYGLAIMIGVSGNINGGAQIFVNWFGLPLWLAQVIYYVIAGIVVFMGMKAVGIAQKYAVILLMGIV AVMTVGTFTHPVNGFYTAPFHWNNLLALYSMVVFATSANQAVIQVVKGLDGNPGKIRKSIFIGFGLSSAFVLVVTLTVLL GTKGTIDKELAYMQLGESIGKWAVILAGIFSLFALLTTFWSNTLALRDVVHEQVGIGNRVSWLIATVPCILFAIFGVSSF IILTRIMSGVVVLVSIMLVLTYGKSRKKAGASPICGVIGTLPFQILMVVSTIVSAIGALIPLS
Specific function: Unknown
COG id: COG0814
COG function: function code E; Amino acid permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41142; Mature: 41011
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKSEAKLTTFEAISMIVGNSIGTGIIAVPYLATKNSMLDVIWMVGAAYVINVILHLII CCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHH AELSYNNGGVQLVKSFEGELFHGVMKKVFSWIVFVVYGLAIMIGVSGNINGGAQIFVNWF HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHH GLPLWLAQVIYYVIAGIVVFMGMKAVGIAQKYAVILLMGIVAVMTVGTFTHPVNGFYTAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECC FHWNNLLALYSMVVFATSANQAVIQVVKGLDGNPGKIRKSIFIGFGLSSAFVLVVTLTVL CCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHEEECCHHHHHHHHHHHHHH LGTKGTIDKELAYMQLGESIGKWAVILAGIFSLFALLTTFWSNTLALRDVVHEQVGIGNR HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCH VSWLIATVPCILFAIFGVSSFIILTRIMSGVVVLVSIMLVLTYGKSRKKAGASPICGVIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH TLPFQILMVVSTIVSAIGALIPLS HHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SIKSEAKLTTFEAISMIVGNSIGTGIIAVPYLATKNSMLDVIWMVGAAYVINVILHLII CCCCCCHHHHHHHHHHHHCCCCCCCCEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHH AELSYNNGGVQLVKSFEGELFHGVMKKVFSWIVFVVYGLAIMIGVSGNINGGAQIFVNWF HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHH GLPLWLAQVIYYVIAGIVVFMGMKAVGIAQKYAVILLMGIVAVMTVGTFTHPVNGFYTAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECC FHWNNLLALYSMVVFATSANQAVIQVVKGLDGNPGKIRKSIFIGFGLSSAFVLVVTLTVL CCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHEEECCHHHHHHHHHHHHHH LGTKGTIDKELAYMQLGESIGKWAVILAGIFSLFALLTTFWSNTLALRDVVHEQVGIGNR HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCH VSWLIATVPCILFAIFGVSSFIILTRIMSGVVVLVSIMLVLTYGKSRKKAGASPICGVIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH TLPFQILMVVSTIVSAIGALIPLS HHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA