Definition Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequence.
Accession NC_012780
Length 626,744

Click here to switch to the map view.

The map label for this gene is 238922054

Identifier: 238922054

GI number: 238922054

Start: 238809

End: 239963

Strand: Reverse

Name: 238922054

Synonym: EUBELI_20289

Alternate gene names: NA

Gene position: 239963-238809 (Counterclockwise)

Preceding gene: 238922056

Following gene: 238922053

Centisome position: 38.29

GC content: 40.78

Gene sequence:

>1155_bases
ATGTCAATAAAATCAGAAGCAAAGCTCACCACATTTGAGGCAATAAGCATGATTGTGGGAAACAGTATAGGAACGGGAAT
AATAGCAGTTCCGTATCTTGCAACGAAAAACAGTATGCTTGATGTTATATGGATGGTAGGAGCAGCTTACGTCATTAATG
TAATTCTACATCTTATAATTGCGGAACTTTCGTATAACAACGGTGGTGTACAGCTTGTAAAAAGTTTTGAGGGGGAATTG
TTCCACGGAGTTATGAAGAAGGTATTCAGCTGGATTGTTTTTGTGGTGTATGGGCTTGCGATTATGATAGGAGTGAGCGG
CAATATTAACGGTGGGGCACAGATATTTGTGAACTGGTTCGGACTGCCGTTATGGCTGGCACAGGTTATATATTATGTAA
TTGCCGGAATTGTTGTATTTATGGGAATGAAGGCGGTAGGAATTGCACAGAAATACGCTGTAATACTTCTTATGGGAATA
GTTGCAGTTATGACAGTAGGAACATTTACACATCCAGTTAATGGATTCTATACAGCACCTTTCCATTGGAATAATCTGCT
TGCACTGTATAGTATGGTTGTATTTGCGACATCTGCTAATCAGGCGGTTATTCAGGTCGTTAAAGGGCTTGACGGCAATC
CGGGAAAGATAAGGAAATCAATATTCATAGGGTTTGGTCTGTCGTCAGCGTTCGTGCTTGTTGTAACACTTACCGTTCTT
CTTGGAACTAAGGGAACAATAGATAAGGAACTTGCTTATATGCAGCTTGGAGAAAGCATCGGAAAATGGGCGGTTATTCT
TGCAGGTATCTTTTCGCTTTTTGCACTGCTTACAACATTCTGGAGTAACACACTTGCTTTAAGAGATGTCGTGCATGAGC
AGGTTGGAATCGGCAACCGTGTAAGCTGGCTTATAGCGACAGTTCCATGTATATTATTTGCGATATTCGGAGTAAGCAGT
TTTATAATACTTACAAGAATTATGAGTGGTGTAGTTGTACTGGTGAGCATAATGCTCGTTCTGACATATGGTAAATCAAG
AAAGAAAGCAGGAGCCAGTCCTATATGCGGAGTGATAGGAACGCTGCCATTTCAGATTCTTATGGTAGTATCGACGATAG
TTTCGGCTATAGGAGCATTAATACCACTCAGCTAA

Upstream 100 bases:

>100_bases
GGGGCGGTTGTGGTCAAATGCAAAAATGAATTTACACAATATTCAATGCAATATATAATGTATATAATATGTTATGTCGT
GAGTGAAAAGGAGAAAAAAT

Downstream 100 bases:

>100_bases
ATATATAACCGGTATTAATTTTAGTGCCGGAAAGAAAGGCGTGAAAGTATGTATAAATCAGACAATTTAAAGCAGACAGA
CAATGAAACATTTACATATA

Product: hypothetical protein

Products: NA

Alternate protein names: Amino Acid Permease; Tryptophan/Tyrosine Permease; Amino Acid Transporter Transmembrane; Sodium-Coupled Neutral Amino Acid Transporter

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MSIKSEAKLTTFEAISMIVGNSIGTGIIAVPYLATKNSMLDVIWMVGAAYVINVILHLIIAELSYNNGGVQLVKSFEGEL
FHGVMKKVFSWIVFVVYGLAIMIGVSGNINGGAQIFVNWFGLPLWLAQVIYYVIAGIVVFMGMKAVGIAQKYAVILLMGI
VAVMTVGTFTHPVNGFYTAPFHWNNLLALYSMVVFATSANQAVIQVVKGLDGNPGKIRKSIFIGFGLSSAFVLVVTLTVL
LGTKGTIDKELAYMQLGESIGKWAVILAGIFSLFALLTTFWSNTLALRDVVHEQVGIGNRVSWLIATVPCILFAIFGVSS
FIILTRIMSGVVVLVSIMLVLTYGKSRKKAGASPICGVIGTLPFQILMVVSTIVSAIGALIPLS

Sequences:

>Translated_384_residues
MSIKSEAKLTTFEAISMIVGNSIGTGIIAVPYLATKNSMLDVIWMVGAAYVINVILHLIIAELSYNNGGVQLVKSFEGEL
FHGVMKKVFSWIVFVVYGLAIMIGVSGNINGGAQIFVNWFGLPLWLAQVIYYVIAGIVVFMGMKAVGIAQKYAVILLMGI
VAVMTVGTFTHPVNGFYTAPFHWNNLLALYSMVVFATSANQAVIQVVKGLDGNPGKIRKSIFIGFGLSSAFVLVVTLTVL
LGTKGTIDKELAYMQLGESIGKWAVILAGIFSLFALLTTFWSNTLALRDVVHEQVGIGNRVSWLIATVPCILFAIFGVSS
FIILTRIMSGVVVLVSIMLVLTYGKSRKKAGASPICGVIGTLPFQILMVVSTIVSAIGALIPLS
>Mature_383_residues
SIKSEAKLTTFEAISMIVGNSIGTGIIAVPYLATKNSMLDVIWMVGAAYVINVILHLIIAELSYNNGGVQLVKSFEGELF
HGVMKKVFSWIVFVVYGLAIMIGVSGNINGGAQIFVNWFGLPLWLAQVIYYVIAGIVVFMGMKAVGIAQKYAVILLMGIV
AVMTVGTFTHPVNGFYTAPFHWNNLLALYSMVVFATSANQAVIQVVKGLDGNPGKIRKSIFIGFGLSSAFVLVVTLTVLL
GTKGTIDKELAYMQLGESIGKWAVILAGIFSLFALLTTFWSNTLALRDVVHEQVGIGNRVSWLIATVPCILFAIFGVSSF
IILTRIMSGVVVLVSIMLVLTYGKSRKKAGASPICGVIGTLPFQILMVVSTIVSAIGALIPLS

Specific function: Unknown

COG id: COG0814

COG function: function code E; Amino acid permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41142; Mature: 41011

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKSEAKLTTFEAISMIVGNSIGTGIIAVPYLATKNSMLDVIWMVGAAYVINVILHLII
CCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AELSYNNGGVQLVKSFEGELFHGVMKKVFSWIVFVVYGLAIMIGVSGNINGGAQIFVNWF
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHH
GLPLWLAQVIYYVIAGIVVFMGMKAVGIAQKYAVILLMGIVAVMTVGTFTHPVNGFYTAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECC
FHWNNLLALYSMVVFATSANQAVIQVVKGLDGNPGKIRKSIFIGFGLSSAFVLVVTLTVL
CCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHEEECCHHHHHHHHHHHHHH
LGTKGTIDKELAYMQLGESIGKWAVILAGIFSLFALLTTFWSNTLALRDVVHEQVGIGNR
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCH
VSWLIATVPCILFAIFGVSSFIILTRIMSGVVVLVSIMLVLTYGKSRKKAGASPICGVIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
TLPFQILMVVSTIVSAIGALIPLS
HHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SIKSEAKLTTFEAISMIVGNSIGTGIIAVPYLATKNSMLDVIWMVGAAYVINVILHLII
CCCCCCHHHHHHHHHHHHCCCCCCCCEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AELSYNNGGVQLVKSFEGELFHGVMKKVFSWIVFVVYGLAIMIGVSGNINGGAQIFVNWF
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHH
GLPLWLAQVIYYVIAGIVVFMGMKAVGIAQKYAVILLMGIVAVMTVGTFTHPVNGFYTAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECC
FHWNNLLALYSMVVFATSANQAVIQVVKGLDGNPGKIRKSIFIGFGLSSAFVLVVTLTVL
CCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHEEECCHHHHHHHHHHHHHH
LGTKGTIDKELAYMQLGESIGKWAVILAGIFSLFALLTTFWSNTLALRDVVHEQVGIGNR
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCH
VSWLIATVPCILFAIFGVSSFIILTRIMSGVVVLVSIMLVLTYGKSRKKAGASPICGVIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
TLPFQILMVVSTIVSAIGALIPLS
HHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA