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The map label for this gene is rhaB [H]

Identifier: 238921989

GI number: 238921989

Start: 183947

End: 185359

Strand: Reverse

Name: rhaB [H]

Synonym: EUBELI_20224

Alternate gene names: 238921989

Gene position: 185359-183947 (Counterclockwise)

Preceding gene: 238921990

Following gene: 238921988

Centisome position: 29.57

GC content: 36.73

Gene sequence:

>1413_bases
ATGAAACCGGTATATTACCTTGCCGTTGATATTGGGGCTTCAAGTGGAAGACATATTCTTGCATCCATGGACAACGGCAG
AATGACAATAGAAGAGGTATATCGTTTTGATAATGGCATGATTAATGATAATGGCAACAAGTTATGGGATGTTGACAGCT
TGTTTGCCAATATTATTGAAGGAATGAAAAAATGTAAAGAACTCGGGAAAATTCCAGTAAGCATGTCGATTGACACATGG
GCTGTTGATTATGTTCTTCTTGATGATAATGACAAATGCATAGGAAATGTATATGGATACAGGGATGAACGTACAGATGG
AATGGATGAAGAAGTTTATAAGGTGATATCCGAAAAAGAATTATATAAGAGAACAGGTATTCAGAAACAGAAGTTTAATA
CAATTTACCAGCTCATGTCGGATAAATTTATAAGACCTGAACAGTTAAAGGAAGCGAAGACATTTATTATGCTTCCAGAT
TATTTTCAGTTTCTTCTTACGGGGGTTAAAGCATCGGAATATACCAATGCAACATCAACACAGCTTGTTAATCCGGAAAC
TAAACAATGGGATTATGAACTGATTGATATGCTTGGAATCAACAGAAATATGTTTATGGAGCTTAAGCAGCCGGGAACAA
TACTGGGAGAATTAACTGATGGTATTAAGAAGATTGTTGGATACAATACAAGGGTTGTTATGTGTGCAAGTCATGATACA
GCATCCGCAGTTATGGCTGTTCCAACAGTAGCAGATAATGTTTTGTATTTAAGTTCTGGAACATGGTCACTGATGGGGAC
AGAACTTCTAAAGGCAAGATGTGATGAGAAAAGCCAGGTATGTAATTTTACCAATGAAGGTGGATACGATTATAGATTTA
GATATTTGAAGAATATTATGGGCCTCTGGATTATACAATCTGTAAGGCATGAATTTGAAGACAGATATACATTTGCAGAG
CTTTGTAAGGAAGCAGAGGAGACAGACTATATAACATCAAGGATAGATGTTAATAATAAATGCTTTCTTGCACCAGAGAA
TATGACAGAGGCAATCAAATCATACTGCAATAATAATGATTTGATTATACCTGACACAGCCGGAGAGATTGCAGCAGTTG
TATATAAGAGTCTGGCTGACAGTTATGCAGATACAGTTATGCAGATAGAAAAGAATCTGGACATTACATATGATGCAATA
TATGTAATAGGTGGAGGTGCTAATGCTGGATATCTTAATCAGCTTACGGCTGATTCGACTGGGAAAACAGTAGTAGCGGG
ACCAGCAGAGGCTACTGCTATTGGAAATATTATGGCGCAGATGATAGCAGATAGTGTGTTTAAGAATTTGAAGGAAGCAA
GAGCGTGTGTAAGAGATTCCTTTGATATTAAACGATTTGAGCAGAAAAGATAA

Upstream 100 bases:

>100_bases
CTTATGAGGGTTAATCCAGACGACAGTCCTGTGAGTGATGATTTAAGGTGTGTTTTTCATCTTGATTAATACATGAATTT
AATACAGGAGGTAAGATTGT

Downstream 100 bases:

>100_bases
TAAATTTCAGATTATATAAGGAGGATAATGCTATATATGACTAATGAACGATATGAATCAGCAAGGAAGATATATCAGAG
TATAGGAGTTGATACTGAGG

Product: rhamnulokinase

Products: NA

Alternate protein names: Rhamnulose kinase [H]

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MKPVYYLAVDIGASSGRHILASMDNGRMTIEEVYRFDNGMINDNGNKLWDVDSLFANIIEGMKKCKELGKIPVSMSIDTW
AVDYVLLDDNDKCIGNVYGYRDERTDGMDEEVYKVISEKELYKRTGIQKQKFNTIYQLMSDKFIRPEQLKEAKTFIMLPD
YFQFLLTGVKASEYTNATSTQLVNPETKQWDYELIDMLGINRNMFMELKQPGTILGELTDGIKKIVGYNTRVVMCASHDT
ASAVMAVPTVADNVLYLSSGTWSLMGTELLKARCDEKSQVCNFTNEGGYDYRFRYLKNIMGLWIIQSVRHEFEDRYTFAE
LCKEAEETDYITSRIDVNNKCFLAPENMTEAIKSYCNNNDLIIPDTAGEIAAVVYKSLADSYADTVMQIEKNLDITYDAI
YVIGGGANAGYLNQLTADSTGKTVVAGPAEATAIGNIMAQMIADSVFKNLKEARACVRDSFDIKRFEQKR

Sequences:

>Translated_470_residues
MKPVYYLAVDIGASSGRHILASMDNGRMTIEEVYRFDNGMINDNGNKLWDVDSLFANIIEGMKKCKELGKIPVSMSIDTW
AVDYVLLDDNDKCIGNVYGYRDERTDGMDEEVYKVISEKELYKRTGIQKQKFNTIYQLMSDKFIRPEQLKEAKTFIMLPD
YFQFLLTGVKASEYTNATSTQLVNPETKQWDYELIDMLGINRNMFMELKQPGTILGELTDGIKKIVGYNTRVVMCASHDT
ASAVMAVPTVADNVLYLSSGTWSLMGTELLKARCDEKSQVCNFTNEGGYDYRFRYLKNIMGLWIIQSVRHEFEDRYTFAE
LCKEAEETDYITSRIDVNNKCFLAPENMTEAIKSYCNNNDLIIPDTAGEIAAVVYKSLADSYADTVMQIEKNLDITYDAI
YVIGGGANAGYLNQLTADSTGKTVVAGPAEATAIGNIMAQMIADSVFKNLKEARACVRDSFDIKRFEQKR
>Mature_470_residues
MKPVYYLAVDIGASSGRHILASMDNGRMTIEEVYRFDNGMINDNGNKLWDVDSLFANIIEGMKKCKELGKIPVSMSIDTW
AVDYVLLDDNDKCIGNVYGYRDERTDGMDEEVYKVISEKELYKRTGIQKQKFNTIYQLMSDKFIRPEQLKEAKTFIMLPD
YFQFLLTGVKASEYTNATSTQLVNPETKQWDYELIDMLGINRNMFMELKQPGTILGELTDGIKKIVGYNTRVVMCASHDT
ASAVMAVPTVADNVLYLSSGTWSLMGTELLKARCDEKSQVCNFTNEGGYDYRFRYLKNIMGLWIIQSVRHEFEDRYTFAE
LCKEAEETDYITSRIDVNNKCFLAPENMTEAIKSYCNNNDLIIPDTAGEIAAVVYKSLADSYADTVMQIEKNLDITYDAI
YVIGGGANAGYLNQLTADSTGKTVVAGPAEATAIGNIMAQMIADSVFKNLKEARACVRDSFDIKRFEQKR

Specific function: Metabolism of L-rhamnose; second step. [C]

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnulokinase family [H]

Homologues:

Organism=Escherichia coli, GI1790338, Length=464, Percent_Identity=38.1465517241379, Blast_Score=317, Evalue=1e-87,
Organism=Escherichia coli, GI1789168, Length=471, Percent_Identity=21.656050955414, Blast_Score=92, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR013449 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.5 [H]

Molecular weight: Translated: 53111; Mature: 53111

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPVYYLAVDIGASSGRHILASMDNGRMTIEEVYRFDNGMINDNGNKLWDVDSLFANIIE
CCCEEEEEEEECCCCCCEEEEECCCCCEEHHHHHHHCCCEEECCCCEEECHHHHHHHHHH
GMKKCKELGKIPVSMSIDTWAVDYVLLDDNDKCIGNVYGYRDERTDGMDEEVYKVISEKE
HHHHHHHHCCCCEEEEECCEEEEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHH
LYKRTGIQKQKFNTIYQLMSDKFIRPEQLKEAKTFIMLPDYFQFLLTGVKASEYTNATST
HHHHHCCCHHHHHHHHHHHHCCCCCHHHHHCCCEEEECHHHHHHHHHCCCHHHCCCCCCC
QLVNPETKQWDYELIDMLGINRNMFMELKQPGTILGELTDGIKKIVGYNTRVVMCASHDT
EECCCCCCCCHHHHHHHHCCCCHHEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCC
ASAVMAVPTVADNVLYLSSGTWSLMGTELLKARCDEKSQVCNFTNEGGYDYRFRYLKNIM
CCHHEEECHHCCCEEEEECCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHH
GLWIIQSVRHEFEDRYTFAELCKEAEETDYITSRIDVNNKCFLAPENMTEAIKSYCNNND
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHEEECCCCEEEECCCHHHHHHHHHHCCCC
LIIPDTAGEIAAVVYKSLADSYADTVMQIEKNLDITYDAIYVIGGGANAGYLNQLTADST
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHCCCCCC
GKTVVAGPAEATAIGNIMAQMIADSVFKNLKEARACVRDSFDIKRFEQKR
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC
>Mature Secondary Structure
MKPVYYLAVDIGASSGRHILASMDNGRMTIEEVYRFDNGMINDNGNKLWDVDSLFANIIE
CCCEEEEEEEECCCCCCEEEEECCCCCEEHHHHHHHCCCEEECCCCEEECHHHHHHHHHH
GMKKCKELGKIPVSMSIDTWAVDYVLLDDNDKCIGNVYGYRDERTDGMDEEVYKVISEKE
HHHHHHHHCCCCEEEEECCEEEEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHH
LYKRTGIQKQKFNTIYQLMSDKFIRPEQLKEAKTFIMLPDYFQFLLTGVKASEYTNATST
HHHHHCCCHHHHHHHHHHHHCCCCCHHHHHCCCEEEECHHHHHHHHHCCCHHHCCCCCCC
QLVNPETKQWDYELIDMLGINRNMFMELKQPGTILGELTDGIKKIVGYNTRVVMCASHDT
EECCCCCCCCHHHHHHHHCCCCHHEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCC
ASAVMAVPTVADNVLYLSSGTWSLMGTELLKARCDEKSQVCNFTNEGGYDYRFRYLKNIM
CCHHEEECHHCCCEEEEECCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHH
GLWIIQSVRHEFEDRYTFAELCKEAEETDYITSRIDVNNKCFLAPENMTEAIKSYCNNND
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHEEECCCCEEEECCCHHHHHHHHHHCCCC
LIIPDTAGEIAAVVYKSLADSYADTVMQIEKNLDITYDAIYVIGGGANAGYLNQLTADST
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHCCCCCC
GKTVVAGPAEATAIGNIMAQMIADSVFKNLKEARACVRDSFDIKRFEQKR
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]