| Definition | Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequence. |
|---|---|
| Accession | NC_012780 |
| Length | 626,744 |
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The map label for this gene is 238921936
Identifier: 238921936
GI number: 238921936
Start: 134305
End: 135195
Strand: Reverse
Name: 238921936
Synonym: EUBELI_20170
Alternate gene names: NA
Gene position: 135195-134305 (Counterclockwise)
Preceding gene: 238921937
Following gene: 238921935
Centisome position: 21.57
GC content: 40.97
Gene sequence:
>891_bases ATGAAAGAGATAACCGCACTTGTAAGCAGAAACAGAAAACTCTTTTTTAAGGACAAAGGAATGTTATTCTCATCAATGAT AACTCCGGTAATTCTTATTGTTTTGTATGCAACATTTTTAGCAAATGTATACAAGGACTCCTTCGTTTCTGCAACTAAGG ACATGATTGATTTATCAGACAAAATAATTAACGGCACAGTGGCAGCACAGTTAGCTGCAGCACTTCTTGCAGTAAGCTGT GTAACTGTTACATTCTGCGTCAATCTTACGATGGTTCAGGACAGAGCCAGCGGAGCAAGAAAAGATTTTGATGTTTCGCC TGTAAGCAAAACAAAGATTTATATAGGATATTTCTTATCAACAGTACTTAATTCGCTTATGGTTAATGGCACAGCACTTG CATTATGCCTGCTTTACATATTGAAGATGGGCTGGTATATGAGTGCGTCAGATGTAATATTTGTTATATTGGATATGATT CTGCTGGTGTTATTTGGAAGCACGCTTTCAAGCATTGTAAGCTATCCGCTAAAGACGCAGGGGCAGTTGTCGGCGGTTGG AACAATCGTAAGTGCAGGGTATGGATTTGTGTGTGGTGCATACATGCCGATATCTAATTTTAGTTCAGGGTTGCAGAAAG CATTGTCCTACCTTCCGGGTACATACGGAACTTCCCTGGTTAAGAACCATATGCTAAACGGAGTGTATAAAGAGATGGCA GACACAGGGCTTCCGTCAGAAGCGGTCACAGTCATAAGGAACACTCTCGACTGTAATCCTGTATTCAGGGGACGTGTTGT TGGCGTGCCACAGATGTATTTAATCATGGCTGGGAGTATAGTTGTATTCGGAGCAGCTTATCTTCTGATTATCATGATTC GGGAGAGATAA
Upstream 100 bases:
>100_bases TGAAACATCAGGAGATATTCCGTGATTATGAAGTCGTAAAAGGTGGTATGGACGATGTATTTCTTGCTGTGACTGGGAAA ATATTGGGAGGTGGTCAGTG
Downstream 100 bases:
>100_bases TAATCTTAATATAATCTTAATATCATATAAAAATGCTTAACCCCTTTTTTAACATAATTCTGGTAGATTTCAATTATGTT AGAAAAGGGGAATTTTTTAT
Product: ABC-2 type transport system permease protein
Products: NA
Alternate protein names: ABC Transporter Permease Protein; ABC-2 Type Transporter; ABC-Type Multidrug Transport System Permease Component; ABC Transporter-Like Protein CylB; ABC Transporter Permease; ABC Transporter; ABC Transporter Integral Membrane Protein; CylB Protein; ABC-2 Type Transport System Permease Protein; CylB Protein
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MKEITALVSRNRKLFFKDKGMLFSSMITPVILIVLYATFLANVYKDSFVSATKDMIDLSDKIINGTVAAQLAAALLAVSC VTVTFCVNLTMVQDRASGARKDFDVSPVSKTKIYIGYFLSTVLNSLMVNGTALALCLLYILKMGWYMSASDVIFVILDMI LLVLFGSTLSSIVSYPLKTQGQLSAVGTIVSAGYGFVCGAYMPISNFSSGLQKALSYLPGTYGTSLVKNHMLNGVYKEMA DTGLPSEAVTVIRNTLDCNPVFRGRVVGVPQMYLIMAGSIVVFGAAYLLIIMIRER
Sequences:
>Translated_296_residues MKEITALVSRNRKLFFKDKGMLFSSMITPVILIVLYATFLANVYKDSFVSATKDMIDLSDKIINGTVAAQLAAALLAVSC VTVTFCVNLTMVQDRASGARKDFDVSPVSKTKIYIGYFLSTVLNSLMVNGTALALCLLYILKMGWYMSASDVIFVILDMI LLVLFGSTLSSIVSYPLKTQGQLSAVGTIVSAGYGFVCGAYMPISNFSSGLQKALSYLPGTYGTSLVKNHMLNGVYKEMA DTGLPSEAVTVIRNTLDCNPVFRGRVVGVPQMYLIMAGSIVVFGAAYLLIIMIRER >Mature_296_residues MKEITALVSRNRKLFFKDKGMLFSSMITPVILIVLYATFLANVYKDSFVSATKDMIDLSDKIINGTVAAQLAAALLAVSC VTVTFCVNLTMVQDRASGARKDFDVSPVSKTKIYIGYFLSTVLNSLMVNGTALALCLLYILKMGWYMSASDVIFVILDMI LLVLFGSTLSSIVSYPLKTQGQLSAVGTIVSAGYGFVCGAYMPISNFSSGLQKALSYLPGTYGTSLVKNHMLNGVYKEMA DTGLPSEAVTVIRNTLDCNPVFRGRVVGVPQMYLIMAGSIVVFGAAYLLIIMIRER
Specific function: Unknown
COG id: COG0842
COG function: function code V; ABC-type multidrug transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32109; Mature: 32109
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEITALVSRNRKLFFKDKGMLFSSMITPVILIVLYATFLANVYKDSFVSATKDMIDLSD CHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIINGTVAAQLAAALLAVSCVTVTFCVNLTMVQDRASGARKDFDVSPVSKTKIYIGYFLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH TVLNSLMVNGTALALCLLYILKMGWYMSASDVIFVILDMILLVLFGSTLSSIVSYPLKTQ HHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GQLSAVGTIVSAGYGFVCGAYMPISNFSSGLQKALSYLPGTYGTSLVKNHMLNGVYKEMA CHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH DTGLPSEAVTVIRNTLDCNPVFRGRVVGVPQMYLIMAGSIVVFGAAYLLIIMIRER HCCCCHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKEITALVSRNRKLFFKDKGMLFSSMITPVILIVLYATFLANVYKDSFVSATKDMIDLSD CHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIINGTVAAQLAAALLAVSCVTVTFCVNLTMVQDRASGARKDFDVSPVSKTKIYIGYFLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH TVLNSLMVNGTALALCLLYILKMGWYMSASDVIFVILDMILLVLFGSTLSSIVSYPLKTQ HHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GQLSAVGTIVSAGYGFVCGAYMPISNFSSGLQKALSYLPGTYGTSLVKNHMLNGVYKEMA CHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH DTGLPSEAVTVIRNTLDCNPVFRGRVVGVPQMYLIMAGSIVVFGAAYLLIIMIRER HCCCCHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA