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The map label for this gene is 238921830

Identifier: 238921830

GI number: 238921830

Start: 43027

End: 44484

Strand: Reverse

Name: 238921830

Synonym: EUBELI_20063

Alternate gene names: NA

Gene position: 44484-43027 (Counterclockwise)

Preceding gene: 238921831

Following gene: 238921829

Centisome position: 7.1

GC content: 39.03

Gene sequence:

>1458_bases
ATGTTTTATAATGAACACATGTTCGAAATAAAATGTAATTTAACAACAAAGGAGAAGCTGGAGATTCTGGCTGATGCAGC
TAAATATGATGTTGCATGTACATCAAGTGGAGTAGACAGGAAAGGCAGGAAAGGATTCCTTGGAAACAGTGAGGCATGCG
GCGTGTGTCATAGTTTTGGTGCTGATGGCAGATGTATTTCTCTTCTTAAGGTTTTGTTTACTAATCATTGCGTATATGAT
TGTAAGTACTGTGTGAACAGGTGCTCCAATGATGTTCCAAGAGCATCTTTTGAACCGGATGAATTATGTCAGCTTGTTAT
TGAATTTTATAAAAGAAACTATATTGAAGGATTATTTTTAAGTTCTGGGGTACTTAAGAATCCGTCCTATACGATGGAGA
AGATATGTGAGACTTTGCTGCTTTTAAGAACCAAGTATAGATTTAATGGATATATTCATGTGAAAGCAATTCCTGGGGCG
CCAGATGAATTATTATCAAAGGCGGGTTATCTTGCTGACAGGGTAAGCGTGAATCTTGAACTGCCGACATCAGATAGTCT
TTCTAAGCTTGCACCGAACAAGAATTTTAAGAATATCCTTGAACCGATGGAAAAGATAACAGGCACTATAGCGGCTAACA
GGCTGTCTGTGGGCAAGGATGCCAGAATGGAAAGAAGCAGTATTAATAAATATCTTACAGGAAGTATATTTAATTCGGCG
AACAATAGCAGATATGGTTCATTATCAGGAAAGAACAGGACAGCACTTGAATCGGGAACCGGGTTATCTTTGCCAGCTGT
TTCTGGAAATACAGGGATGAACAGGGCTTTTGCGCCTGCAGGCCAGAGCACTCAGATGATAATAGGAGCTACGCCAGAGA
CAGATCTTACACTTATAAGGACTACCCAGCATCTTTATCAGAATTATGATTTAAAGAGAGTTTTTTATTCGGCATATATA
CCACTTAATGAGGATTCAGCATTACCAGAATTGGATGCAGAGATTCCTCTTCTTAGGGAACACAGACTTTATCAGGCAGA
CTGGCTTTTAAGGTATTATGGATTCCAGGCTGATGAGCTTTTATCTGAAAACAGACCGAATTTTAACGAATATCTGGATC
CGAAGTGTGACTGGGCAGTAAGGCATCTGGGACAATTTCCGGTTGAGATACAGACCGCATCATATGATATGTTGTTGCGG
ATTCCGGGAGTTGGTCCTAAGTCTGCCAAGAGAATTGTGCAGACAAGAAAGTATGCAAGGCTGGACTTTGATACATTAAA
GAAGATGGGAGTAGTACTTAAGAGAGCACATTATTTTATTACATGTAATGGAAAGATGATGTATAAAATTCCAATAAACG
AGAATTATATAACAGCATGTCTTATGGGTGACAACCAAAAGGAGAATTGGGAGATAAAGCATCAGAACCAGCAATATCAG
CAATTATCATTGTTTTAG

Upstream 100 bases:

>100_bases
AGGAATGTATGCATAATGTATAGAAATAAGCCCTTTACTGGAGAATTCTGGTAAAGGGTTTTTTGTATATTTTACGATTA
GATATTGACTTTTCGAACAA

Downstream 100 bases:

>100_bases
AAGAATTAATGCACATAATTATTATGAGTGGAGGCTGTGGTATGTATATATTTGTTTGTGAAGACAGATTCGAAGATATG
ATGTGCTGCATATACCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical SAM Family Protein; Elongator /MiaB/NifB; Radical Sam Domain Protein; Radical SAM; Radical SAM Superfamily Protein; Biotin Synthase Related Domain-Containing Protein; Biotin Synthase Related Domain Containing Protein; Elongator Protein; Radical SAM Methylase Protein; Helix-Hairpin-Helix Motif; Radical SAM Protein

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MFYNEHMFEIKCNLTTKEKLEILADAAKYDVACTSSGVDRKGRKGFLGNSEACGVCHSFGADGRCISLLKVLFTNHCVYD
CKYCVNRCSNDVPRASFEPDELCQLVIEFYKRNYIEGLFLSSGVLKNPSYTMEKICETLLLLRTKYRFNGYIHVKAIPGA
PDELLSKAGYLADRVSVNLELPTSDSLSKLAPNKNFKNILEPMEKITGTIAANRLSVGKDARMERSSINKYLTGSIFNSA
NNSRYGSLSGKNRTALESGTGLSLPAVSGNTGMNRAFAPAGQSTQMIIGATPETDLTLIRTTQHLYQNYDLKRVFYSAYI
PLNEDSALPELDAEIPLLREHRLYQADWLLRYYGFQADELLSENRPNFNEYLDPKCDWAVRHLGQFPVEIQTASYDMLLR
IPGVGPKSAKRIVQTRKYARLDFDTLKKMGVVLKRAHYFITCNGKMMYKIPINENYITACLMGDNQKENWEIKHQNQQYQ
QLSLF

Sequences:

>Translated_485_residues
MFYNEHMFEIKCNLTTKEKLEILADAAKYDVACTSSGVDRKGRKGFLGNSEACGVCHSFGADGRCISLLKVLFTNHCVYD
CKYCVNRCSNDVPRASFEPDELCQLVIEFYKRNYIEGLFLSSGVLKNPSYTMEKICETLLLLRTKYRFNGYIHVKAIPGA
PDELLSKAGYLADRVSVNLELPTSDSLSKLAPNKNFKNILEPMEKITGTIAANRLSVGKDARMERSSINKYLTGSIFNSA
NNSRYGSLSGKNRTALESGTGLSLPAVSGNTGMNRAFAPAGQSTQMIIGATPETDLTLIRTTQHLYQNYDLKRVFYSAYI
PLNEDSALPELDAEIPLLREHRLYQADWLLRYYGFQADELLSENRPNFNEYLDPKCDWAVRHLGQFPVEIQTASYDMLLR
IPGVGPKSAKRIVQTRKYARLDFDTLKKMGVVLKRAHYFITCNGKMMYKIPINENYITACLMGDNQKENWEIKHQNQQYQ
QLSLF
>Mature_485_residues
MFYNEHMFEIKCNLTTKEKLEILADAAKYDVACTSSGVDRKGRKGFLGNSEACGVCHSFGADGRCISLLKVLFTNHCVYD
CKYCVNRCSNDVPRASFEPDELCQLVIEFYKRNYIEGLFLSSGVLKNPSYTMEKICETLLLLRTKYRFNGYIHVKAIPGA
PDELLSKAGYLADRVSVNLELPTSDSLSKLAPNKNFKNILEPMEKITGTIAANRLSVGKDARMERSSINKYLTGSIFNSA
NNSRYGSLSGKNRTALESGTGLSLPAVSGNTGMNRAFAPAGQSTQMIIGATPETDLTLIRTTQHLYQNYDLKRVFYSAYI
PLNEDSALPELDAEIPLLREHRLYQADWLLRYYGFQADELLSENRPNFNEYLDPKCDWAVRHLGQFPVEIQTASYDMLLR
IPGVGPKSAKRIVQTRKYARLDFDTLKKMGVVLKRAHYFITCNGKMMYKIPINENYITACLMGDNQKENWEIKHQNQQYQ
QLSLF

Specific function: Unknown

COG id: COG4277

COG function: function code R; Predicted DNA-binding protein with the Helix-hairpin-helix motif

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54944; Mature: 54944

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYNEHMFEIKCNLTTKEKLEILADAAKYDVACTSSGVDRKGRKGFLGNSEACGVCHSFG
CCCCCEEEEEEECCCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCC
ADGRCISLLKVLFTNHCVYDCKYCVNRCSNDVPRASFEPDELCQLVIEFYKRNYIEGLFL
CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEE
SSGVLKNPSYTMEKICETLLLLRTKYRFNGYIHVKAIPGAPDELLSKAGYLADRVSVNLE
CCCCCCCCCHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCHHHHHHCCCCEEEEEEEEE
LPTSDSLSKLAPNKNFKNILEPMEKITGTIAANRLSVGKDARMERSSINKYLTGSIFNSA
CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC
NNSRYGSLSGKNRTALESGTGLSLPAVSGNTGMNRAFAPAGQSTQMIIGATPETDLTLIR
CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEH
TTQHLYQNYDLKRVFYSAYIPLNEDSALPELDAEIPLLREHRLYQADWLLRYYGFQADEL
HHHHHHHCCCHHEEEEEEEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCHHHH
LSENRPNFNEYLDPKCDWAVRHLGQFPVEIQTASYDMLLRIPGVGPKSAKRIVQTRKYAR
HHCCCCCHHHHCCCCCCHHHHHHCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHH
LDFDTLKKMGVVLKRAHYFITCNGKMMYKIPINENYITACLMGDNQKENWEIKHQNQQYQ
CCHHHHHHHHHHHHHCEEEEEECCEEEEEEECCCCEEEEEEECCCCCCCCEECCCCCHHH
QLSLF
HHCCC
>Mature Secondary Structure
MFYNEHMFEIKCNLTTKEKLEILADAAKYDVACTSSGVDRKGRKGFLGNSEACGVCHSFG
CCCCCEEEEEEECCCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCC
ADGRCISLLKVLFTNHCVYDCKYCVNRCSNDVPRASFEPDELCQLVIEFYKRNYIEGLFL
CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEE
SSGVLKNPSYTMEKICETLLLLRTKYRFNGYIHVKAIPGAPDELLSKAGYLADRVSVNLE
CCCCCCCCCHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCHHHHHHCCCCEEEEEEEEE
LPTSDSLSKLAPNKNFKNILEPMEKITGTIAANRLSVGKDARMERSSINKYLTGSIFNSA
CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC
NNSRYGSLSGKNRTALESGTGLSLPAVSGNTGMNRAFAPAGQSTQMIIGATPETDLTLIR
CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEH
TTQHLYQNYDLKRVFYSAYIPLNEDSALPELDAEIPLLREHRLYQADWLLRYYGFQADEL
HHHHHHHCCCHHEEEEEEEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCHHHH
LSENRPNFNEYLDPKCDWAVRHLGQFPVEIQTASYDMLLRIPGVGPKSAKRIVQTRKYAR
HHCCCCCHHHHCCCCCCHHHHHHCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHH
LDFDTLKKMGVVLKRAHYFITCNGKMMYKIPINENYITACLMGDNQKENWEIKHQNQQYQ
CCHHHHHHHHHHHHHCEEEEEECCEEEEEEECCCCEEEEEEECCCCCCCCEECCCCCHHH
QLSLF
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA