Click here to switch to the map view.

The map label for this gene is 238921784

Identifier: 238921784

GI number: 238921784

Start: 8875

End: 9408

Strand: Reverse

Name: 238921784

Synonym: EUBELI_20017

Alternate gene names: NA

Gene position: 9408-8875 (Counterclockwise)

Preceding gene: 238921785

Following gene: 238921783

Centisome position: 1.5

GC content: 34.27

Gene sequence:

>534_bases
ATGAAAGGAGGAAACAGTATGGATCAGAAAAAGATTGGAAGTTTCTTAAAAGAACTTAGGAAAGAAAAGGATATTACACA
GGAACAGCTTGCCGAAAAGATAAAAGTTTCAGGCCGAACGGTTTCTAGATGGGAAACAGGTTCTAATATGCCTGATATTA
GTTTGTTGGCTCAATTGGCTGATTTTTATGATGTTAGTATACCTGAAATCATTGATGGAGAAAGGAAAAGCGAGAATATG
AATGAAGAAGTAAAAGAAACAGTATTGAAATTATCTGATTATACAGAGACAATTAATCAAAAAATTAAAGGAAGGTTATT
TGTACTTACGGTTATTGCAATAATAGGAATGATTGCGTTCGTGATTATTGAATTTACAGGACTAGATACACCTGGAAGTG
TCTATGAAAGAGTAGCAGGTGCAGGTCTTGGGTTAGATTGTGGTATGTTAATAGTCCTTGCAATGTATCTTTCTGGGCTT
TTAGGAAAGATTAAGGCGAGACGAGAAATGAAACGAAAATACAACTGTAAATAA

Upstream 100 bases:

>100_bases
CCAATATAAGTAATACTAGACAGATTTGTCCAATAGCGTAAATACGGCATTTTCTCGCTTTTTGTCGTGTTATGTTTAGT
AGAATAATATTACTCTGTCA

Downstream 100 bases:

>100_bases
AAAGTCTAATAGACTGTAAAATTCCAGGTTTCGTTCCATTCTGTAAAGAAAAATGAATAAATGTCGATAAATATTATGAG
CTAAGGATGGCGTCTGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; HTH Domain-Containing Protein; XRE Family Transcriptional Regulator; Transcriptional Regulator Cro/CI Family

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MKGGNSMDQKKIGSFLKELRKEKDITQEQLAEKIKVSGRTVSRWETGSNMPDISLLAQLADFYDVSIPEIIDGERKSENM
NEEVKETVLKLSDYTETINQKIKGRLFVLTVIAIIGMIAFVIIEFTGLDTPGSVYERVAGAGLGLDCGMLIVLAMYLSGL
LGKIKARREMKRKYNCK

Sequences:

>Translated_177_residues
MKGGNSMDQKKIGSFLKELRKEKDITQEQLAEKIKVSGRTVSRWETGSNMPDISLLAQLADFYDVSIPEIIDGERKSENM
NEEVKETVLKLSDYTETINQKIKGRLFVLTVIAIIGMIAFVIIEFTGLDTPGSVYERVAGAGLGLDCGMLIVLAMYLSGL
LGKIKARREMKRKYNCK
>Mature_177_residues
MKGGNSMDQKKIGSFLKELRKEKDITQEQLAEKIKVSGRTVSRWETGSNMPDISLLAQLADFYDVSIPEIIDGERKSENM
NEEVKETVLKLSDYTETINQKIKGRLFVLTVIAIIGMIAFVIIEFTGLDTPGSVYERVAGAGLGLDCGMLIVLAMYLSGL
LGKIKARREMKRKYNCK

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19786; Mature: 19786

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGGNSMDQKKIGSFLKELRKEKDITQEQLAEKIKVSGRTVSRWETGSNMPDISLLAQLA
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHH
DFYDVSIPEIIDGERKSENMNEEVKETVLKLSDYTETINQKIKGRLFVLTVIAIIGMIAF
HHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
VIIEFTGLDTPGSVYERVAGAGLGLDCGMLIVLAMYLSGLLGKIKARREMKRKYNCK
HHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKGGNSMDQKKIGSFLKELRKEKDITQEQLAEKIKVSGRTVSRWETGSNMPDISLLAQLA
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHH
DFYDVSIPEIIDGERKSENMNEEVKETVLKLSDYTETINQKIKGRLFVLTVIAIIGMIAF
HHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
VIIEFTGLDTPGSVYERVAGAGLGLDCGMLIVLAMYLSGLLGKIKARREMKRKYNCK
HHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA