| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is mnmG [H]
Identifier: 238921734
GI number: 238921734
Start: 3781120
End: 3783009
Strand: Direct
Name: mnmG [H]
Synonym: NT01EI_3903
Alternate gene names: 238921734
Gene position: 3781120-3783009 (Clockwise)
Preceding gene: 238921733
Following gene: 238921735
Centisome position: 99.18
GC content: 55.93
Gene sequence:
>1890_bases ATGTTTTACCCCGATCCCTTTGACGTCATCATTATCGGTGGCGGCCATGCCGGTACCGAAGCGGCCATGGCTTCTGCCCG AATGGGCCGCCAGACCCTGTTATTAACACATAATATCGATACGCTAGGACATATGTCCTGCAATCCAGCCATCGGTGGTA TCGGTAAGGGGCACTTAGTAAAAGAGGTCGATGCCCTGGGGGGACTGATGGCTCAGGCGATCGACAAAGGTGGGATCCAG TTTAGGATCCTCAACGGCAGCAAAGGACCCGCGGTACGTGCAACCCGGGCACAGGCCGATCGCATACTGTATCGTCAGGC GGTACGTATGGCGCTAGAGAACCAGCCCAACCTGATGATCTTTCAACAGGCTGTAGAGGATCTGATCGTTGAAAACGATC GCGTCGTCGGTGCGGTTACCCAAATGGGGCTAAAGTTCCGCGCCAAAGCTGTGGTTCTCACCGTAGGCACGTTCCTGAAC GGTAAAATTCATATCGGTCTGGAGAACTACAGCGGTGGTCGCGCAGGCGATCCGCCTTCCATCGGACTGGCCCGCCGCCT GCGCGAGTTACCGCTACGGGTAAACCGACTGAAAACCGGCACACCTCCGCGCCTTGACGCTCGAACCATCGACTTCAGCG TGCTGGCGCAGCAGCACGGTGACAACCCAGCGCCGGTTTTTTCTTTCCTCGGTGAGGCCAGTCAGCATCCGCGTCAGGTA CCGTGCTATATAACGCATACCAACGAACATACCCATGAGGTGATCCGCGGCAATCTGGATCGCAGCCCGATGTATGCCGG GATCATCGAGGGGATCGGCCCACGCTATTGCCCGTCGATCGAAGATAAGGTGATGCGCTTTGCCGATCGTAATGCGCACC AGATCTTTTTGGAGCCAGAGGGACTGAGCAGCAATGAGATCTATCCAAACGGGATCTCAACCAGCTTGCCGTTTGACGTT CAGATGGCCATCGTACGGTCGATGGCGGGGATGCAAAACACCCGCATCGTGCGTCCGGGGTATGCGATTGAGTATGATTT CTTCGATCCGCGGGACTTGAAGCCCACCCTGGAGAGTAAATACATTCAGGGGCTGTTCTTCGCCGGTCAGATCAACGGCA CAACCGGCTATGAGGAAGCGGCGGCACAGGGGTTACTGGCAGGCCTGAACGCTGGACGCTGTGCTGCCGATTTAGAAGGT TGGATGCCCCGTCGCGACGAGGCATACCTTGGCGTGCTGGTGGATGACCTGTGTACCCTGGGTACCAAAGAGCCCTACCG CATGTTTACCTCACGTGCGGAGTATCGTCTGATGTTGCGTGAAGATAACGCCGACTTGCGTTTGACCCCGATAGGGCGTG AACTGGGTCTGGTCGACGATGTGCGTTGGGCCCAGTTTAACCAGAAGCTGGAAAACATGGAGCGTGAACGTCAGCGCCTG CGTGAAACCTGGGTACACCCGCAGTCTGAACGGGCGGCTGAGGTGAATGTGTTGTTAAAAACCCCGCTGTCTCGCGAGGC CAGCGGTGAGGATCTATTGCGTAGGCCTGAGATGGATTATGCCACGCTGACCTCGCTGTCTCCGTTTTATCCACCGCTGG CGGATCGTCAGGCGGCTGAGCAGGTTGAGATCCAAGTTAAATACCAAGGGTATATTGCCCGTCAGCAGGACGAAATTGAA AAGCAGCTGCGTAACGAAAATACGTTGCTGCCAGCCGATTTGGACTATCGTCAGGTCAATGGCTTGTCCAATGAGGTGAT CGCGAAACTTAACGATCATAAACCCAGCTCTATCGGTCAGGCATCGCGTATTTCCGGTATTACGCCTGCAGCGATCTCTA TTCTGCTGGTGTGGCTGAAAAAGCAGGGAATGCTGCGTCGCAGCCTGTAG
Upstream 100 bases:
>100_bases TCCACATAGGTTGGACCTGCGCCTAAACTTGAGTAGAATCCCCACCCCTAGGCAAATAACGATCGTTGAGAGCCTTTCGG TCAGCGCGAGGTGTAGTACC
Downstream 100 bases:
>100_bases CTGCGCGCCCATTGGCCGCTGCCTGGCGGCCATTATTCACGACCGGCCGTCTTTAAGACGGCCGGCTTTGATTGAGGTAT ATACCTTGTACAAGCAACTG
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A [H]
Number of amino acids: Translated: 629; Mature: 629
Protein sequence:
>629_residues MFYPDPFDVIIIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGHMSCNPAIGGIGKGHLVKEVDALGGLMAQAIDKGGIQ FRILNGSKGPAVRATRAQADRILYRQAVRMALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLN GKIHIGLENYSGGRAGDPPSIGLARRLRELPLRVNRLKTGTPPRLDARTIDFSVLAQQHGDNPAPVFSFLGEASQHPRQV PCYITHTNEHTHEVIRGNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLSSNEIYPNGISTSLPFDV QMAIVRSMAGMQNTRIVRPGYAIEYDFFDPRDLKPTLESKYIQGLFFAGQINGTTGYEEAAAQGLLAGLNAGRCAADLEG WMPRRDEAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLRLTPIGRELGLVDDVRWAQFNQKLENMERERQRL RETWVHPQSERAAEVNVLLKTPLSREASGEDLLRRPEMDYATLTSLSPFYPPLADRQAAEQVEIQVKYQGYIARQQDEIE KQLRNENTLLPADLDYRQVNGLSNEVIAKLNDHKPSSIGQASRISGITPAAISILLVWLKKQGMLRRSL
Sequences:
>Translated_629_residues MFYPDPFDVIIIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGHMSCNPAIGGIGKGHLVKEVDALGGLMAQAIDKGGIQ FRILNGSKGPAVRATRAQADRILYRQAVRMALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLN GKIHIGLENYSGGRAGDPPSIGLARRLRELPLRVNRLKTGTPPRLDARTIDFSVLAQQHGDNPAPVFSFLGEASQHPRQV PCYITHTNEHTHEVIRGNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLSSNEIYPNGISTSLPFDV QMAIVRSMAGMQNTRIVRPGYAIEYDFFDPRDLKPTLESKYIQGLFFAGQINGTTGYEEAAAQGLLAGLNAGRCAADLEG WMPRRDEAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLRLTPIGRELGLVDDVRWAQFNQKLENMERERQRL RETWVHPQSERAAEVNVLLKTPLSREASGEDLLRRPEMDYATLTSLSPFYPPLADRQAAEQVEIQVKYQGYIARQQDEIE KQLRNENTLLPADLDYRQVNGLSNEVIAKLNDHKPSSIGQASRISGITPAAISILLVWLKKQGMLRRSL >Mature_629_residues MFYPDPFDVIIIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGHMSCNPAIGGIGKGHLVKEVDALGGLMAQAIDKGGIQ FRILNGSKGPAVRATRAQADRILYRQAVRMALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLN GKIHIGLENYSGGRAGDPPSIGLARRLRELPLRVNRLKTGTPPRLDARTIDFSVLAQQHGDNPAPVFSFLGEASQHPRQV PCYITHTNEHTHEVIRGNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPEGLSSNEIYPNGISTSLPFDV QMAIVRSMAGMQNTRIVRPGYAIEYDFFDPRDLKPTLESKYIQGLFFAGQINGTTGYEEAAAQGLLAGLNAGRCAADLEG WMPRRDEAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLRLTPIGRELGLVDDVRWAQFNQKLENMERERQRL RETWVHPQSERAAEVNVLLKTPLSREASGEDLLRRPEMDYATLTSLSPFYPPLADRQAAEQVEIQVKYQGYIARQQDEIE KQLRNENTLLPADLDYRQVNGLSNEVIAKLNDHKPSSIGQASRISGITPAAISILLVWLKKQGMLRRSL
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family [H]
Homologues:
Organism=Homo sapiens, GI74024895, Length=632, Percent_Identity=46.2025316455696, Blast_Score=515, Evalue=1e-146, Organism=Homo sapiens, GI19882217, Length=657, Percent_Identity=44.4444444444444, Blast_Score=501, Evalue=1e-141, Organism=Homo sapiens, GI183227703, Length=672, Percent_Identity=43.452380952381, Blast_Score=496, Evalue=1e-140, Organism=Escherichia coli, GI2367273, Length=628, Percent_Identity=89.0127388535032, Blast_Score=1157, Evalue=0.0, Organism=Caenorhabditis elegans, GI17534255, Length=636, Percent_Identity=41.3522012578616, Blast_Score=465, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6321202, Length=621, Percent_Identity=46.0547504025765, Blast_Score=519, Evalue=1e-148, Organism=Drosophila melanogaster, GI24658174, Length=634, Percent_Identity=47.0031545741325, Blast_Score=521, Evalue=1e-148,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 [H]
Pfam domain/function: PF01134 GIDA [H]
EC number: NA
Molecular weight: Translated: 69963; Mature: 69963
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: PS50096 IQ ; PS01280 GIDA_1 ; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFYPDPFDVIIIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGHMSCNPAIGGIGKGHLV CCCCCCCCEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHH KEVDALGGLMAQAIDKGGIQFRILNGSKGPAVRATRAQADRILYRQAVRMALENQPNLMI HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEE FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLNGKIHIGLENYSGGRAGDPPS HHHHHHHHHHCCCCEEEHHHHHCHHHCCEEEEEEEECEECCEEEEEEECCCCCCCCCCCC IGLARRLRELPLRVNRLKTGTPPRLDARTIDFSVLAQQHGDNPAPVFSFLGEASQHPRQV HHHHHHHHHCCCHHHHCCCCCCCCCCCEECHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC PCYITHTNEHTHEVIRGNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPE CEEEECCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCC GLSSNEIYPNGISTSLPFDVQMAIVRSMAGMQNTRIVRPGYAIEYDFFDPRDLKPTLESK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCEEEECCCCCCCCCCHHHHH YIQGLFFAGQINGTTGYEEAAAQGLLAGLNAGRCAADLEGWMPRRDEAYLGVLVDDLCTL HHCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHC GTKEPYRMFTSRAEYRLMLREDNADLRLTPIGRELGLVDDVRWAQFNQKLENMERERQRL CCCCHHHHHHCCCCEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RETWVHPQSERAAEVNVLLKTPLSREASGEDLLRRPEMDYATLTSLSPFYPPLADRQAAE HHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCC QVEIQVKYQGYIARQQDEIEKQLRNENTLLPADLDYRQVNGLSNEVIAKLNDHKPSSIGQ EEEEEEEECCEEECCHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHCCCCCCCCCCC ASRISGITPAAISILLVWLKKQGMLRRSL HHHCCCCCHHHHHHHHHHHHHCCHHHHCC >Mature Secondary Structure MFYPDPFDVIIIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGHMSCNPAIGGIGKGHLV CCCCCCCCEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHH KEVDALGGLMAQAIDKGGIQFRILNGSKGPAVRATRAQADRILYRQAVRMALENQPNLMI HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEE FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLNGKIHIGLENYSGGRAGDPPS HHHHHHHHHHCCCCEEEHHHHHCHHHCCEEEEEEEECEECCEEEEEEECCCCCCCCCCCC IGLARRLRELPLRVNRLKTGTPPRLDARTIDFSVLAQQHGDNPAPVFSFLGEASQHPRQV HHHHHHHHHCCCHHHHCCCCCCCCCCCEECHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC PCYITHTNEHTHEVIRGNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPE CEEEECCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCC GLSSNEIYPNGISTSLPFDVQMAIVRSMAGMQNTRIVRPGYAIEYDFFDPRDLKPTLESK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCEEEECCCCCCCCCCHHHHH YIQGLFFAGQINGTTGYEEAAAQGLLAGLNAGRCAADLEGWMPRRDEAYLGVLVDDLCTL HHCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHC GTKEPYRMFTSRAEYRLMLREDNADLRLTPIGRELGLVDDVRWAQFNQKLENMERERQRL CCCCHHHHHHCCCCEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RETWVHPQSERAAEVNVLLKTPLSREASGEDLLRRPEMDYATLTSLSPFYPPLADRQAAE HHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCC QVEIQVKYQGYIARQQDEIEKQLRNENTLLPADLDYRQVNGLSNEVIAKLNDHKPSSIGQ EEEEEEEECCEEECCHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHCCCCCCCCCCC ASRISGITPAAISILLVWLKKQGMLRRSL HHHCCCCCHHHHHHHHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA