| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is argC [H]
Identifier: 238921686
GI number: 238921686
Start: 3728081
End: 3729103
Strand: Reverse
Name: argC [H]
Synonym: NT01EI_3847
Alternate gene names: 238921686
Gene position: 3729103-3728081 (Counterclockwise)
Preceding gene: 238921687
Following gene: 238921685
Centisome position: 97.82
GC content: 59.34
Gene sequence:
>1023_bases ATGTCCAGTATTCAGAAGCCGTTAAATGGGTTAATCGTTGGCGCCAGCGGCTATACCGGTGCTGAGCTCGCCGCCTGTCT GCAGCGCCATCCCTACATCACCATAGCGGGTTTGACCGTGTCTGCGCAAAGCGTTGATGGCGGAAAATTGTTGTCAGATA TTCACCCGCGGCTGAAAGGGGGGGTCGATCTCCCGTTGATTGCCAGCGATGATAGCGCGGCGCTGGCCGATCTGGCCGAT GTGGTATTTCTGGCCACCGATCATGCGGTGAGCCATCTTTTGGCCCCGACGTTTTTGGCCGCTGGGTGCACCGTCTTCGA TCTTTCCGGGGCTTATCGGCTCCGTCAGCGTGATGTTTACCCAGAGTACTACGGCTTTACTCATCAACATCCTGAATGGC TTGAGCAGGCGGTATATGGTCTGGCGGAGTGGCAGGGCGCGGCGCTGCGCACGGCGCAGCTGGTCGCGCTGCCGGGGTGC TACCCGACGGCGGCACAGCTGGCATTGAAGCCGTTATTAGACAGTGGGTTGGTTGATACGGCGCAGTGGCCGGTTATCAA CGCCGTCAGCGGCGTCAGCGGTGCCGGACGTAAGGCCAGCCTCGGCAGCAGCTTTTGCGAGGTGAGTCTGCAGCCCTATG GGCTGTTTACGCATCGTCATCAGCCGGAGATCGCCGCACACCTAGGCATTCCGGTGATTTTTACCCCCCACCTGGGCAAT TTTCCTCGCGGCATACTGGAGACGATCCACCTACGGGTAAAAAGCGGCGTGGATGCGGCCGAGGTGGCGACGGCTTTTTA TCGAGCCTATCAGGATAAACCCTTAATCCGCCTGTATCAGGGAACGCTGCCGTCCATCGGCGCGGTGGCGGGTACGCCGT TTTGTGACATCGGCTTCTCCCAGCAGGGACAGCATCTGATCGTGGTTGCTGCAGAGGACAATCTGCTGAAAGGGGCGGCG GCCCAGGCGGTGCAGTGTATGAACCTGCGCTTTGGCTTTCCTGAGACGTGCGCTCTTCTTTAA
Upstream 100 bases:
>100_bases TTGGCAGCAGCGGTGGGGCTAACTGGATGTGTGGACGGGGGCTGATGCATCTCAGCGCCCAGCCGGTATCCACGGTTAAC CAAGAGGAGCGATCGCAGCG
Downstream 100 bases:
>100_bases CCATCTATCCCGGACAGACAGAGGCAGCTATGGATCCGTTAATCATCAAACTCGGCGGCGTATTACTCGATAACCCACAG GCGATGGAGCGTCTCTTTCA
Product: N-acetyl-gamma-glutamyl-phosphate reductase
Products: NA
Alternate protein names: AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase [H]
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MSSIQKPLNGLIVGASGYTGAELAACLQRHPYITIAGLTVSAQSVDGGKLLSDIHPRLKGGVDLPLIASDDSAALADLAD VVFLATDHAVSHLLAPTFLAAGCTVFDLSGAYRLRQRDVYPEYYGFTHQHPEWLEQAVYGLAEWQGAALRTAQLVALPGC YPTAAQLALKPLLDSGLVDTAQWPVINAVSGVSGAGRKASLGSSFCEVSLQPYGLFTHRHQPEIAAHLGIPVIFTPHLGN FPRGILETIHLRVKSGVDAAEVATAFYRAYQDKPLIRLYQGTLPSIGAVAGTPFCDIGFSQQGQHLIVVAAEDNLLKGAA AQAVQCMNLRFGFPETCALL
Sequences:
>Translated_340_residues MSSIQKPLNGLIVGASGYTGAELAACLQRHPYITIAGLTVSAQSVDGGKLLSDIHPRLKGGVDLPLIASDDSAALADLAD VVFLATDHAVSHLLAPTFLAAGCTVFDLSGAYRLRQRDVYPEYYGFTHQHPEWLEQAVYGLAEWQGAALRTAQLVALPGC YPTAAQLALKPLLDSGLVDTAQWPVINAVSGVSGAGRKASLGSSFCEVSLQPYGLFTHRHQPEIAAHLGIPVIFTPHLGN FPRGILETIHLRVKSGVDAAEVATAFYRAYQDKPLIRLYQGTLPSIGAVAGTPFCDIGFSQQGQHLIVVAAEDNLLKGAA AQAVQCMNLRFGFPETCALL >Mature_339_residues SSIQKPLNGLIVGASGYTGAELAACLQRHPYITIAGLTVSAQSVDGGKLLSDIHPRLKGGVDLPLIASDDSAALADLADV VFLATDHAVSHLLAPTFLAAGCTVFDLSGAYRLRQRDVYPEYYGFTHQHPEWLEQAVYGLAEWQGAALRTAQLVALPGCY PTAAQLALKPLLDSGLVDTAQWPVINAVSGVSGAGRKASLGSSFCEVSLQPYGLFTHRHQPEIAAHLGIPVIFTPHLGNF PRGILETIHLRVKSGVDAAEVATAFYRAYQDKPLIRLYQGTLPSIGAVAGTPFCDIGFSQQGQHLIVVAAEDNLLKGAAA QAVQCMNLRFGFPETCALL
Specific function: Arginine biosynthesis; third step. [C]
COG id: COG0002
COG function: function code E; Acetylglutamate semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAGSA dehydrogenase family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790396, Length=333, Percent_Identity=67.8678678678679, Blast_Score=457, Evalue=1e-130, Organism=Saccharomyces cerevisiae, GI6320913, Length=337, Percent_Identity=30.8605341246291, Blast_Score=116, Evalue=5e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023013 - InterPro: IPR000706 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: =1.2.1.38 [H]
Molecular weight: Translated: 36068; Mature: 35936
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS01224 ARGC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIQKPLNGLIVGASGYTGAELAACLQRHPYITIAGLTVSAQSVDGGKLLSDIHPRLKG CCCHHCCCCCEEEECCCCCHHHHHHHHHHCCEEEEEEEEEEECCCCCHHHHHHHHHHHCC GVDLPLIASDDSAALADLADVVFLATDHAVSHLLAPTFLAAGCTVFDLSGAYRLRQRDVY CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHCCCC PEYYGFTHQHPEWLEQAVYGLAEWQGAALRTAQLVALPGCYPTAAQLALKPLLDSGLVDT HHHCCCCCCCHHHHHHHHHHHHHCCCCHHEEEEEEEECCCCHHHHHHHHHHHHHCCCCCC AQWPVINAVSGVSGAGRKASLGSSFCEVSLQPYGLFTHRHQPEIAAHLGIPVIFTPHLGN CCCCHHHHHCCCCCCCCCCCCCCHHHEEECCCEEEECCCCCCCHHHHCCCCEEECCCCCC FPRGILETIHLRVKSGVDAAEVATAFYRAYQDKPLIRLYQGTLPSIGAVAGTPFCDIGFS CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHCCCCEEECCCC QQGQHLIVVAAEDNLLKGAAAQAVQCMNLRFGFPETCALL CCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHCC >Mature Secondary Structure SSIQKPLNGLIVGASGYTGAELAACLQRHPYITIAGLTVSAQSVDGGKLLSDIHPRLKG CCHHCCCCCEEEECCCCCHHHHHHHHHHCCEEEEEEEEEEECCCCCHHHHHHHHHHHCC GVDLPLIASDDSAALADLADVVFLATDHAVSHLLAPTFLAAGCTVFDLSGAYRLRQRDVY CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHCCCC PEYYGFTHQHPEWLEQAVYGLAEWQGAALRTAQLVALPGCYPTAAQLALKPLLDSGLVDT HHHCCCCCCCHHHHHHHHHHHHHCCCCHHEEEEEEEECCCCHHHHHHHHHHHHHCCCCCC AQWPVINAVSGVSGAGRKASLGSSFCEVSLQPYGLFTHRHQPEIAAHLGIPVIFTPHLGN CCCCHHHHHCCCCCCCCCCCCCCHHHEEECCCEEEECCCCCCCHHHHCCCCEEECCCCCC FPRGILETIHLRVKSGVDAAEVATAFYRAYQDKPLIRLYQGTLPSIGAVAGTPFCDIGFS CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHCCCCEEECCCC QQGQHLIVVAAEDNLLKGAAAQAVQCMNLRFGFPETCALL CCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]