| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is argG
Identifier: 238921684
GI number: 238921684
Start: 3726022
End: 3727239
Strand: Reverse
Name: argG
Synonym: NT01EI_3845
Alternate gene names: 238921684
Gene position: 3727239-3726022 (Counterclockwise)
Preceding gene: 238921685
Following gene: 238921683
Centisome position: 97.77
GC content: 60.26
Gene sequence:
>1218_bases ATGGCAACCCAAAGCATCAGCAAAATCGTTCTGGCCTACTCCGGCGGCCTGGATACCTCTGCCATTATTCCGTGGCTTAA GGAAAACTACGGCGACTGTGAGGTTATCGCCTTTGTGGCGGACATCGGTCAGGAGCGTGAAGATCTGGTGGGTATCGAGC AGAAAGCGCTCCGCTCCGGCGCCGCCTCCTGCTATGTCGTGGATCTGCGCGAAACCTTTATCAAGGACTACGTCTATCCG GTGCTGAAGAGCGGCGCGCTCTATGAGGGTAGCTATCTGCTGGGGACGTCGATGGCCCGTCCACTGATCGCGAAAGCGCA GGTTGAGCTGGCGCTGGAGCTGGGGGCCGACGCCCTGTGTCACGGCGCGACCGGGAAAGGCAACGATCAGGTGCGTTTTG AAACCACCTATACTGCGCTGGCGCCGCAGCTGCAGGTCGTGGCACCGTGGCGTGAGTGGGATCTTCGCTCGCGTGAGGCG CTGCTCGATTATCTGAAGGGGCGCGATATTCCCACTACCGCCACGCTGGAGAAGATCTACAGCCGTGACGCCAACGCTTG GCATATCTCTACCGAGGGGGGCGTGCTGGAGAGTCCGTGGAGTCCGGCCAACCAAGACTGCTGGGTGTGGACCTGTGCCC CAGAGGAGGCACCGGATCAGCCTGAACTGGTGACCGTGGGCGTTGAAAAGGGCGAGGTCGTTTCGGTCAATGGGGTGGCG ATGACCCCCTTTGGCTGCCTGCAGGCGCTGAATGCGCTGGGCACCCGCCACGGCGTAGGACGGATTGATATCGTCGAAAA CCGTCTGGTGGGCATTAAATCACGTGGCTGCTATGAGACGCCGGGGGGCACCATCATGATGGCAGCGCTGCGCGGCGTGG AACAACTGGTACTGGATCGCGACAGCTTCCAGTGGCGTGAGAAGCTGGGCCAGGAGATGTCCTATGTCGTGTACGACGGC CGCTGGTTCGCACCGCTGCGTCAGTCGCTGCAGGCGGCGGCCGATGCGTTGGCTGACGCGGTGAGCGGTGAGGTGGTGAT TAAGCTGTATAAAGGACAGGCTATCGCCATACAGAAGAAGTCGGTCAACAGCCTGTATAACGAGGCTTTCGCCACCTTTG GTGAGGATGATGTGTATGATCACAGCCATGCCGGCGGCTTTATTCGCCTGTTCTCCCTCTCTTCACGCATTCGCGCGCTG AACAGCGCAAAGCAGTAG
Upstream 100 bases:
>100_bases ACGCCGAAAAGCTGCCGGCGCTGTTTAACGGCGAAGCCGTCGGCACGCGTATTCATGCATAACACAACGACACGATTTGG TTAAGAATAAGGAAACCCGT
Downstream 100 bases:
>100_bases TACGCGCAGGGCAGAATGCGGGCCGCGCTGCGGCCGCGGCCCGCCGATCATTTTATTTTGAGTACGGAGCAGTCACTATG GCACTTTGGGGCGGGCGTTT
Product: argininosuccinate synthase
Products: NA
Alternate protein names: Citrulline--aspartate ligase
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MATQSISKIVLAYSGGLDTSAIIPWLKENYGDCEVIAFVADIGQEREDLVGIEQKALRSGAASCYVVDLRETFIKDYVYP VLKSGALYEGSYLLGTSMARPLIAKAQVELALELGADALCHGATGKGNDQVRFETTYTALAPQLQVVAPWREWDLRSREA LLDYLKGRDIPTTATLEKIYSRDANAWHISTEGGVLESPWSPANQDCWVWTCAPEEAPDQPELVTVGVEKGEVVSVNGVA MTPFGCLQALNALGTRHGVGRIDIVENRLVGIKSRGCYETPGGTIMMAALRGVEQLVLDRDSFQWREKLGQEMSYVVYDG RWFAPLRQSLQAAADALADAVSGEVVIKLYKGQAIAIQKKSVNSLYNEAFATFGEDDVYDHSHAGGFIRLFSLSSRIRAL NSAKQ
Sequences:
>Translated_405_residues MATQSISKIVLAYSGGLDTSAIIPWLKENYGDCEVIAFVADIGQEREDLVGIEQKALRSGAASCYVVDLRETFIKDYVYP VLKSGALYEGSYLLGTSMARPLIAKAQVELALELGADALCHGATGKGNDQVRFETTYTALAPQLQVVAPWREWDLRSREA LLDYLKGRDIPTTATLEKIYSRDANAWHISTEGGVLESPWSPANQDCWVWTCAPEEAPDQPELVTVGVEKGEVVSVNGVA MTPFGCLQALNALGTRHGVGRIDIVENRLVGIKSRGCYETPGGTIMMAALRGVEQLVLDRDSFQWREKLGQEMSYVVYDG RWFAPLRQSLQAAADALADAVSGEVVIKLYKGQAIAIQKKSVNSLYNEAFATFGEDDVYDHSHAGGFIRLFSLSSRIRAL NSAKQ >Mature_404_residues ATQSISKIVLAYSGGLDTSAIIPWLKENYGDCEVIAFVADIGQEREDLVGIEQKALRSGAASCYVVDLRETFIKDYVYPV LKSGALYEGSYLLGTSMARPLIAKAQVELALELGADALCHGATGKGNDQVRFETTYTALAPQLQVVAPWREWDLRSREAL LDYLKGRDIPTTATLEKIYSRDANAWHISTEGGVLESPWSPANQDCWVWTCAPEEAPDQPELVTVGVEKGEVVSVNGVAM TPFGCLQALNALGTRHGVGRIDIVENRLVGIKSRGCYETPGGTIMMAALRGVEQLVLDRDSFQWREKLGQEMSYVVYDGR WFAPLRQSLQAAADALADAVSGEVVIKLYKGQAIAIQKKSVNSLYNEAFATFGEDDVYDHSHAGGFIRLFSLSSRIRALN SAKQ
Specific function: Arginine biosynthesis; seventh step. [C]
COG id: COG0137
COG function: function code E; Argininosuccinate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the argininosuccinate synthase family. Type 1 subfamily
Homologues:
Organism=Homo sapiens, GI53759107, Length=398, Percent_Identity=41.7085427135678, Blast_Score=294, Evalue=1e-79, Organism=Homo sapiens, GI16950633, Length=398, Percent_Identity=41.7085427135678, Blast_Score=294, Evalue=1e-79, Organism=Escherichia coli, GI1789563, Length=370, Percent_Identity=29.1891891891892, Blast_Score=134, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6324514, Length=417, Percent_Identity=38.6091127098321, Blast_Score=274, Evalue=2e-74, Organism=Drosophila melanogaster, GI21358151, Length=409, Percent_Identity=41.320293398533, Blast_Score=292, Evalue=2e-79,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): ASSY_EDWI9 (C5BC58)
Other databases:
- EMBL: CP001600 - RefSeq: YP_002935199.1 - GeneID: 7959886 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_3845 - OMA: ADLVTFE - ProtClustDB: PRK00509 - GO: GO:0005737 - HAMAP: MF_00005 - InterPro: IPR001518 - InterPro: IPR018223 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR11587 - TIGRFAMs: TIGR00032
Pfam domain/function: PF00764 Arginosuc_synth
EC number: =6.3.4.5
Molecular weight: Translated: 44298; Mature: 44166
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00564 ARGININOSUCCIN_SYN_1; PS00565 ARGININOSUCCIN_SYN_2
Important sites: BINDING 40-40 BINDING 92-92 BINDING 97-97 BINDING 122-122 BINDING 124-124 BINDING 128-128 BINDING 128-128 BINDING 129-129 BINDING 132-132 BINDING 181-181 BINDING 190-190 BINDING 266-266 BINDING 278-278
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATQSISKIVLAYSGGLDTSAIIPWLKENYGDCEVIAFVADIGQEREDLVGIEQKALRSG CCCHHHHHEEEEECCCCCHHHHHHHHHCCCCCHHEEHEEHHHCCCHHHHHHHHHHHHHCC AASCYVVDLRETFIKDYVYPVLKSGALYEGSYLLGTSMARPLIAKAQVELALELGADALC CCEEEEEHHHHHHHHHHHHHHHHCCCEECCCEEECHHHHCHHHHHHHHHHHHHCCCCHHC HGATGKGNDQVRFETTYTALAPQLQVVAPWREWDLRSREALLDYLKGRDIPTTATLEKIY CCCCCCCCCCEEEEEEHHHHCCCEEEEECCHHCCCCHHHHHHHHHCCCCCCCHHHHHHHH SRDANAWHISTEGGVLESPWSPANQDCWVWTCAPEEAPDQPELVTVGVEKGEVVSVNGVA CCCCCEEEEECCCCEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEECCEE MTPFGCLQALNALGTRHGVGRIDIVENRLVGIKSRGCYETPGGTIMMAALRGVEQLVLDR ECCHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCEECCCCHHHHHHHHHHHHHHHCC DSFQWREKLGQEMSYVVYDGRWFAPLRQSLQAAADALADAVSGEVVIKLYKGQAIAIQKK CCHHHHHHHCCCCEEEEECCEECHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEHH SVNSLYNEAFATFGEDDVYDHSHAGGFIRLFSLSSRIRALNSAKQ HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCC >Mature Secondary Structure ATQSISKIVLAYSGGLDTSAIIPWLKENYGDCEVIAFVADIGQEREDLVGIEQKALRSG CCHHHHHEEEEECCCCCHHHHHHHHHCCCCCHHEEHEEHHHCCCHHHHHHHHHHHHHCC AASCYVVDLRETFIKDYVYPVLKSGALYEGSYLLGTSMARPLIAKAQVELALELGADALC CCEEEEEHHHHHHHHHHHHHHHHCCCEECCCEEECHHHHCHHHHHHHHHHHHHCCCCHHC HGATGKGNDQVRFETTYTALAPQLQVVAPWREWDLRSREALLDYLKGRDIPTTATLEKIY CCCCCCCCCCEEEEEEHHHHCCCEEEEECCHHCCCCHHHHHHHHHCCCCCCCHHHHHHHH SRDANAWHISTEGGVLESPWSPANQDCWVWTCAPEEAPDQPELVTVGVEKGEVVSVNGVA CCCCCEEEEECCCCEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEECCEE MTPFGCLQALNALGTRHGVGRIDIVENRLVGIKSRGCYETPGGTIMMAALRGVEQLVLDR ECCHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCEECCCCHHHHHHHHHHHHHHHCC DSFQWREKLGQEMSYVVYDGRWFAPLRQSLQAAADALADAVSGEVVIKLYKGQAIAIQKK CCHHHHHHHCCCCEEEEECCEECHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEHH SVNSLYNEAFATFGEDDVYDHSHAGGFIRLFSLSSRIRALNSAKQ HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA