Click here to switch to the map view.

The map label for this gene is yijD [H]

Identifier: 238921675

GI number: 238921675

Start: 3717182

End: 3717445

Strand: Reverse

Name: yijD [H]

Synonym: NT01EI_3836

Alternate gene names: 238921675

Gene position: 3717445-3717182 (Counterclockwise)

Preceding gene: 238921676

Following gene: 238921672

Centisome position: 97.51

GC content: 53.41

Gene sequence:

>264_bases
GTGCTGTCAGCCTATTGTTTACACCAGCGTTATCTTCACGTCGCCATGCCAGAGGGTATGCCAGTGCTCTCATCCTCCTG
TTTTCTGCTCGGCCTCCTGTTTTACAGCACGCTGATCCGCGTTGAATATCCCGCCATTGGCTCCAACTTTCTGCCCTCTT
TACTGTGTGTAGCGTTGGTGCTGTGGATCGGTGTCCGGATTAAAAGACAGCGCAGCCGCACCGTGCAGGATAGGGATGAT
GATGACGATGAGAGACACCGTTGA

Upstream 100 bases:

>100_bases
AGAAAAGGCATTTACACAGAATCGTGTACAGGGTCGCGGATCGTTTTCTGCGTTGTTCAGTAGCGTCGTACCATTTTCCG
TTTTTCCACTGATAGCCCTG

Downstream 100 bases:

>100_bases
GTCACACCGCCGCGGGCAGCCAGACAGAGAGCTGCCCGTTTTTTTGGGATCAGCGACGTTCCAGCAGTACCCCGCACTCC
ATATGGTGGGTATACGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MLSAYCLHQRYLHVAMPEGMPVLSSSCFLLGLLFYSTLIRVEYPAIGSNFLPSLLCVALVLWIGVRIKRQRSRTVQDRDD
DDDERHR

Sequences:

>Translated_87_residues
MLSAYCLHQRYLHVAMPEGMPVLSSSCFLLGLLFYSTLIRVEYPAIGSNFLPSLLCVALVLWIGVRIKRQRSRTVQDRDD
DDDERHR
>Mature_87_residues
MLSAYCLHQRYLHVAMPEGMPVLSSSCFLLGLLFYSTLIRVEYPAIGSNFLPSLLCVALVLWIGVRIKRQRSRTVQDRDD
DDDERHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790402, Length=76, Percent_Identity=50, Blast_Score=96, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009867
- ProDom:   PD076479 [H]

Pfam domain/function: PF07226 DUF1422 [H]

EC number: NA

Molecular weight: Translated: 10054; Mature: 10054

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSAYCLHQRYLHVAMPEGMPVLSSSCFLLGLLFYSTLIRVEYPAIGSNFLPSLLCVALV
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LWIGVRIKRQRSRTVQDRDDDDDERHR
HHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLSAYCLHQRYLHVAMPEGMPVLSSSCFLLGLLFYSTLIRVEYPAIGSNFLPSLLCVALV
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LWIGVRIKRQRSRTVQDRDDDDDERHR
HHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]