| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is aphA [H]
Identifier: 238921672
GI number: 238921672
Start: 3713440
End: 3714165
Strand: Reverse
Name: aphA [H]
Synonym: NT01EI_3833
Alternate gene names: 238921672
Gene position: 3714165-3713440 (Counterclockwise)
Preceding gene: 238921675
Following gene: 238921671
Centisome position: 97.43
GC content: 46.56
Gene sequence:
>726_bases ATGTTTATAACCACAAAAAAATCACTGATTGCATTAGTCCTTGCTACAGCCGGTCTGATTTCCTCTCCAGTTTCTTTTGC TACTGAGACAGGCGCACAGCCGAATCTGGGCGCTACGCTGACGCAGTTAACGCAGCAATATCCGATTCACTGGATCTCTA TTGAGCAGGTCGCTGAAAGTCTTAAAGGGAAGGCACCGATTAGCGTTGGTTTTGATATCGACGATACACTGTTATTTTCC AGCCCAGCATTTTTTTATGGGAAACAAAAATTTTCACCTGACAGCAATGCGTTTTTGAAAAACCAGAAGTTTTGGGATGC AGTCAGCAGCAGCGGTTGGGATCGCTTCTCGATCCCCAAAGATTCTGGCCGGGCGCTGATGGAACTGCATTTAAAACGCG GTGATCATGTCTATTTCATCACCGGACGTCCGATGCCGTCTAATGGTAAAGAGGATTTGACTCAAACGCTGAAAGACGAT TTCAAAATTCCGGATAATCAGCTGAATAAGGTGATTTTTGCCGGGACCAAACAAGATGCCAAAGTTGAATATATGCAGAA GTACCATATCACCATCTTCTACGGTGATTCTGACAATGATATTCAGGACGCCCGCAAGGCTGGCGCTGAAGGGATCCGGG TGCTGCGCCCGCTGAACTCCACCAATAAGCCGATGCCGAAGAACGGGGCATTTGGTGAAAAAGTCATCGTGAATTCCCAG TACTGA
Upstream 100 bases:
>100_bases TAAACATGGATCATGATCACATTAATCACGCTGTTTGAGTCGATATAGTTTTATATATACAAAATGGACTCCCTCCATGC AAAATTAAGAGATTATCGCT
Downstream 100 bases:
>100_bases TCGCGTTAATAGACAAGAAGGCATTGATGAAACATACGCTAAAACTGAGCCTGGCCGCGGCGGTGATGGTATTGGCCGGT TGCGCCGCCCACCCGCAGAG
Product: acid phosphatase/phosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MFITTKKSLIALVLATAGLISSPVSFATETGAQPNLGATLTQLTQQYPIHWISIEQVAESLKGKAPISVGFDIDDTLLFS SPAFFYGKQKFSPDSNAFLKNQKFWDAVSSSGWDRFSIPKDSGRALMELHLKRGDHVYFITGRPMPSNGKEDLTQTLKDD FKIPDNQLNKVIFAGTKQDAKVEYMQKYHITIFYGDSDNDIQDARKAGAEGIRVLRPLNSTNKPMPKNGAFGEKVIVNSQ Y
Sequences:
>Translated_241_residues MFITTKKSLIALVLATAGLISSPVSFATETGAQPNLGATLTQLTQQYPIHWISIEQVAESLKGKAPISVGFDIDDTLLFS SPAFFYGKQKFSPDSNAFLKNQKFWDAVSSSGWDRFSIPKDSGRALMELHLKRGDHVYFITGRPMPSNGKEDLTQTLKDD FKIPDNQLNKVIFAGTKQDAKVEYMQKYHITIFYGDSDNDIQDARKAGAEGIRVLRPLNSTNKPMPKNGAFGEKVIVNSQ Y >Mature_241_residues MFITTKKSLIALVLATAGLISSPVSFATETGAQPNLGATLTQLTQQYPIHWISIEQVAESLKGKAPISVGFDIDDTLLFS SPAFFYGKQKFSPDSNAFLKNQKFWDAVSSSGWDRFSIPKDSGRALMELHLKRGDHVYFITGRPMPSNGKEDLTQTLKDD FKIPDNQLNKVIFAGTKQDAKVEYMQKYHITIFYGDSDNDIQDARKAGAEGIRVLRPLNSTNKPMPKNGAFGEKVIVNSQ Y
Specific function: Dephosphorylates several organic phosphomonoesters and catalyzes the transfer of low-energy phosphate groups from phosphomonoesters to hydroxyl groups of various organic compounds. Might function as a broad spectrum dephosphorylating enzyme able to scaven
COG id: COG3700
COG function: function code R; Acid phosphatase (class B)
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class B bacterial acid phosphatase family [H]
Homologues:
Organism=Escherichia coli, GI2367341, Length=241, Percent_Identity=50.6224066390041, Blast_Score=241, Evalue=2e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005519 - InterPro: IPR023214 - InterPro: IPR010025 [H]
Pfam domain/function: PF03767 Acid_phosphat_B [H]
EC number: =3.1.3.2 [H]
Molecular weight: Translated: 26761; Mature: 26761
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFITTKKSLIALVLATAGLISSPVSFATETGAQPNLGATLTQLTQQYPIHWISIEQVAES CEEECHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEHHHHHHH LKGKAPISVGFDIDDTLLFSSPAFFYGKQKFSPDSNAFLKNQKFWDAVSSSGWDRFSIPK HCCCCCEEECCCCCCCEEECCCHHEECCCCCCCCCCCHHCCCHHHHHHHCCCCCCCCCCC DSGRALMELHLKRGDHVYFITGRPMPSNGKEDLTQTLKDDFKIPDNQLNKVIFAGTKQDA CCCCCEEHHEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHCEEEEECCCCCC KVEYMQKYHITIFYGDSDNDIQDARKAGAEGIRVLRPLNSTNKPMPKNGAFGEKVIVNSQ HHEEEEEEEEEEEECCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECC Y C >Mature Secondary Structure MFITTKKSLIALVLATAGLISSPVSFATETGAQPNLGATLTQLTQQYPIHWISIEQVAES CEEECHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEHHHHHHH LKGKAPISVGFDIDDTLLFSSPAFFYGKQKFSPDSNAFLKNQKFWDAVSSSGWDRFSIPK HCCCCCEEECCCCCCCEEECCCHHEECCCCCCCCCCCHHCCCHHHHHHHCCCCCCCCCCC DSGRALMELHLKRGDHVYFITGRPMPSNGKEDLTQTLKDDFKIPDNQLNKVIFAGTKQDA CCCCCEEHHEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHCEEEEECCCCCC KVEYMQKYHITIFYGDSDNDIQDARKAGAEGIRVLRPLNSTNKPMPKNGAFGEKVIVNSQ HHEEEEEEEEEEEECCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECC Y C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10564784; 11677608; 12644504 [H]