| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is cpxP [H]
Identifier: 238921654
GI number: 238921654
Start: 3691605
End: 3692084
Strand: Reverse
Name: cpxP [H]
Synonym: NT01EI_3810
Alternate gene names: 238921654
Gene position: 3692084-3691605 (Counterclockwise)
Preceding gene: 238921658
Following gene: 238921653
Centisome position: 96.85
GC content: 49.58
Gene sequence:
>480_bases ATGCATAAGACTGCAACCCTGACCTTGGCCGCTTTGCTTATGATGACCTCTTTCGGCGTATATGCTGATGAAGGTGAGCC GGTATGCAGCTGGTATCAGGGTAATGACATGATGCAACAGAGTATGGATCATAACTATATGTTTGATGGTGTGAACCTTA CTGAGCATCAGCGTCAGCAGATGCGGGATTTAATGCAGACTACGCGCCACGGTTTTGCAGGCGTAAAGCTGCATGATATC GAAGCCATGCATCGCCTGGTGACAGCAGAACAGTTTGATGAGATTGCGGTGAAAACCTTGGCTGAGAAGATGGCACAGGA GAGCGTGATCCGCCAAGTCGAGATGGCTCGGATCCGCAATATGGTGTTTAACCTCCTCACATCGGATCAGAAGGCCCAGT TAAACGCACGCTATCAGCAGAAAATTGCCGGTTGGCAGCAGCAGATAGCGTACATGCAGAATTCTTCTGCCCAGAAGTAG
Upstream 100 bases:
>100_bases TGACTTTACTTAGTTTTACATCCCCTGACGCATGTTTTCAGCTGTGTGGGTAGACTGCATACATCGATTCAATAAGCGGG CCGGTACATAGGAGTGAGAG
Downstream 100 bases:
>100_bases TGTACGACCGAGTAGCACCCTGTTTTTCCTTGCCATAGACACCATCCCTGTCTTCCCCGCCATGATGGCGGGGCTTTTTT TTGTTCGTAATTCGCTATAC
Product: periplasmic repressor CpxP
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MHKTATLTLAALLMMTSFGVYADEGEPVCSWYQGNDMMQQSMDHNYMFDGVNLTEHQRQQMRDLMQTTRHGFAGVKLHDI EAMHRLVTAEQFDEIAVKTLAEKMAQESVIRQVEMARIRNMVFNLLTSDQKAQLNARYQQKIAGWQQQIAYMQNSSAQK
Sequences:
>Translated_159_residues MHKTATLTLAALLMMTSFGVYADEGEPVCSWYQGNDMMQQSMDHNYMFDGVNLTEHQRQQMRDLMQTTRHGFAGVKLHDI EAMHRLVTAEQFDEIAVKTLAEKMAQESVIRQVEMARIRNMVFNLLTSDQKAQLNARYQQKIAGWQQQIAYMQNSSAQK >Mature_159_residues MHKTATLTLAALLMMTSFGVYADEGEPVCSWYQGNDMMQQSMDHNYMFDGVNLTEHQRQQMRDLMQTTRHGFAGVKLHDI EAMHRLVTAEQFDEIAVKTLAEKMAQESVIRQVEMARIRNMVFNLLTSDQKAQLNARYQQKIAGWQQQIAYMQNSSAQK
Specific function: Aids in combating extracytoplasmic protein-mediated toxicity [H]
COG id: COG3678
COG function: function code UNTP; P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To E.coli spy [H]
Homologues:
Organism=Escherichia coli, GI48994991, Length=134, Percent_Identity=50, Blast_Score=133, Evalue=4e-33, Organism=Escherichia coli, GI1788039, Length=98, Percent_Identity=28.5714285714286, Blast_Score=61, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012899 [H]
Pfam domain/function: PF07813 LTXXQ [H]
EC number: NA
Molecular weight: Translated: 18351; Mature: 18351
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 8.8 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 8.8 %Met (Mature Protein) 9.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKTATLTLAALLMMTSFGVYADEGEPVCSWYQGNDMMQQSMDHNYMFDGVNLTEHQRQQ CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHCCCCCEECCCCCCHHHHHH MRDLMQTTRHGFAGVKLHDIEAMHRLVTAEQFDEIAVKTLAEKMAQESVIRQVEMARIRN HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVFNLLTSDQKAQLNARYQQKIAGWQQQIAYMQNSSAQK HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MHKTATLTLAALLMMTSFGVYADEGEPVCSWYQGNDMMQQSMDHNYMFDGVNLTEHQRQQ CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHCCCCCEECCCCCCHHHHHH MRDLMQTTRHGFAGVKLHDIEAMHRLVTAEQFDEIAVKTLAEKMAQESVIRQVEMARIRN HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVFNLLTSDQKAQLNARYQQKIAGWQQQIAYMQNSSAQK HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]