| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is fieF [H]
Identifier: 238921653
GI number: 238921653
Start: 3690569
End: 3691471
Strand: Reverse
Name: fieF [H]
Synonym: NT01EI_3809
Alternate gene names: 238921653
Gene position: 3691471-3690569 (Counterclockwise)
Preceding gene: 238921654
Following gene: 238921652
Centisome position: 96.83
GC content: 58.36
Gene sequence:
>903_bases ATGCATCAGCAATATGCACGATTGGTGAAGGTGGCCGCGCTTAGCGCGACGGTGATAGCCTCTATCTTGCTGATTTTGAA GATTTTAGCTTGGTGGCATACCGGATCAGTCAGCCTGCTGGCGTCGCTGGTGGACTCGTTGGTCGATATCGCGGCCTCAT TGACCAATCTGCTGGTGATCCGTTACGCCCTGCAGCCGGCGGATAAGGATCATACCTTTGGCCACGGCAAGGCCGAGTCG TTGGCCGCGCTGGCGCAGAGTATGTTCATCTGTGGTTCAGCGCTGTTCCTGTTCCTGACCGGTTTCCAGCACCTGCTCAA GCCGGAGCCGATGAACGATCCCGGTGCCGGGATGTGGGTTACGGCGTTTGCGCTGGTGTGTACCCTGGCGCTGGTGACCT TTCAACGCTGGGTGGTACGCAGGACCCAGAGTCAAGCGGTGCGTGCCGACATGCTGCATTACCAGTCCGACGTGCTGATG AACGGGGCCATTCTGATCTCTCTGGGATTGAGCTGGTACGGCGTGGCCAGAGCTGACGCGCTGTTCGCTCTGGGGATTGG GGCCTATATCCTCTACAGTGCCCTGCGCATGGGGTACGATGCGGTGCAGTCCCTGCTCGATCGGGCCCTGAGCTCCGAGG AGCGGCATCAGATCATCCGCATTGTCCGCGAGCACCGCGGTGTCTTGGGTGTACACGATCTGCGTACCCGCCAGTCCGGC CCAACCCGTTTTATTCAGTTACATCTAGAGATGGACGATACGCTGCCATTGGTAGATGCTCATGCTATTGCCGACGGCGT TGAGCACGATCTTCTGCAGCACTTTCCCGCTGCGGATGTGATTATTCATCAGGATCCGACCTCGGTGGTTCCCGCTGAAC AAAAAGGGCTGTGGGAGAGCTAA
Upstream 100 bases:
>100_bases CATAGACACCATCCCTGTCTTCCCCGCCATGATGGCGGGGCTTTTTTTTGTTCGTAATTCGCTATACTGGGCGGCTGATT AAGCAACCTTTAGGTGAACT
Downstream 100 bases:
>100_bases AAAATACCAGTTTGTGAGCCGGATTACAGCGCAGCTATTTTTTTCGCGTAGTAAAATATTTACCATGTAGTGGGCTGACC TGAATCAATTCAGCTTGATT
Product: ferrous iron efflux protein F
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MHQQYARLVKVAALSATVIASILLILKILAWWHTGSVSLLASLVDSLVDIAASLTNLLVIRYALQPADKDHTFGHGKAES LAALAQSMFICGSALFLFLTGFQHLLKPEPMNDPGAGMWVTAFALVCTLALVTFQRWVVRRTQSQAVRADMLHYQSDVLM NGAILISLGLSWYGVARADALFALGIGAYILYSALRMGYDAVQSLLDRALSSEERHQIIRIVREHRGVLGVHDLRTRQSG PTRFIQLHLEMDDTLPLVDAHAIADGVEHDLLQHFPAADVIIHQDPTSVVPAEQKGLWES
Sequences:
>Translated_300_residues MHQQYARLVKVAALSATVIASILLILKILAWWHTGSVSLLASLVDSLVDIAASLTNLLVIRYALQPADKDHTFGHGKAES LAALAQSMFICGSALFLFLTGFQHLLKPEPMNDPGAGMWVTAFALVCTLALVTFQRWVVRRTQSQAVRADMLHYQSDVLM NGAILISLGLSWYGVARADALFALGIGAYILYSALRMGYDAVQSLLDRALSSEERHQIIRIVREHRGVLGVHDLRTRQSG PTRFIQLHLEMDDTLPLVDAHAIADGVEHDLLQHFPAADVIIHQDPTSVVPAEQKGLWES >Mature_300_residues MHQQYARLVKVAALSATVIASILLILKILAWWHTGSVSLLASLVDSLVDIAASLTNLLVIRYALQPADKDHTFGHGKAES LAALAQSMFICGSALFLFLTGFQHLLKPEPMNDPGAGMWVTAFALVCTLALVTFQRWVVRRTQSQAVRADMLHYQSDVLM NGAILISLGLSWYGVARADALFALGIGAYILYSALRMGYDAVQSLLDRALSSEERHQIIRIVREHRGVLGVHDLRTRQSG PTRFIQLHLEMDDTLPLVDAHAIADGVEHDLLQHFPAADVIIHQDPTSVVPAEQKGLWES
Specific function: Cation-efflux transporter that may have a role in detoxification [H]
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. FieF subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=295, Percent_Identity=75.593220338983, Blast_Score=446, Evalue=1e-127,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 33002; Mature: 33002
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQQYARLVKVAALSATVIASILLILKILAWWHTGSVSLLASLVDSLVDIAASLTNLLVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH RYALQPADKDHTFGHGKAESLAALAQSMFICGSALFLFLTGFQHLLKPEPMNDPGAGMWV HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH TAFALVCTLALVTFQRWVVRRTQSQAVRADMLHYQSDVLMNGAILISLGLSWYGVARADA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCHHHHHHHHHH LFALGIGAYILYSALRMGYDAVQSLLDRALSSEERHQIIRIVREHRGVLGVHDLRTRQSG HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCCC PTRFIQLHLEMDDTLPLVDAHAIADGVEHDLLQHFPAADVIIHQDPTSVVPAEQKGLWES CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MHQQYARLVKVAALSATVIASILLILKILAWWHTGSVSLLASLVDSLVDIAASLTNLLVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH RYALQPADKDHTFGHGKAESLAALAQSMFICGSALFLFLTGFQHLLKPEPMNDPGAGMWV HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH TAFALVCTLALVTFQRWVVRRTQSQAVRADMLHYQSDVLMNGAILISLGLSWYGVARADA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCHHHHHHHHHH LFALGIGAYILYSALRMGYDAVQSLLDRALSSEERHQIIRIVREHRGVLGVHDLRTRQSG HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCCC PTRFIQLHLEMDDTLPLVDAHAIADGVEHDLLQHFPAADVIIHQDPTSVVPAEQKGLWES CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA